Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_C12
(469 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026210-3|AAB71286.3| 382|Caenorhabditis elegans Hypothetical ... 30 0.95
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 29 1.3
Z70034-14|CAC44294.1| 356|Caenorhabditis elegans Hypothetical p... 29 1.7
Z70034-13|CAC44293.1| 350|Caenorhabditis elegans Hypothetical p... 29 1.7
Z49910-11|CAC44292.1| 356|Caenorhabditis elegans Hypothetical p... 29 1.7
Z49910-10|CAC44291.1| 350|Caenorhabditis elegans Hypothetical p... 29 1.7
AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical... 28 2.9
AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical... 28 2.9
AC199169-6|ABO33256.1| 502|Caenorhabditis elegans Hypothetical ... 28 2.9
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical pr... 28 3.8
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein. 28 3.8
Z93393-7|CAB07694.1| 383|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z49907-11|CAF31469.1| 844|Caenorhabditis elegans Hypothetical p... 27 8.9
Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical p... 27 8.9
Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical pr... 27 8.9
AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type chlo... 27 8.9
AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride ... 27 8.9
>AF026210-3|AAB71286.3| 382|Caenorhabditis elegans Hypothetical
protein F48A11.4 protein.
Length = 382
Score = 29.9 bits (64), Expect = 0.95
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 371 VRTVIHRSRIDCILYTCVYKP 433
+RT++H I CI+Y+C + P
Sbjct: 315 LRTILHNPNIKCIIYSCFHLP 335
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 29.5 bits (63), Expect = 1.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 49 KIRYEGLVCLTCLQIIFNSCVLYGVFIQN 135
KI+YEGL + IF VL G+FIQ+
Sbjct: 980 KIKYEGLASFFLFENIFFLLVLAGIFIQS 1008
>Z70034-14|CAC44294.1| 356|Caenorhabditis elegans Hypothetical
protein C18E9.11b protein.
Length = 356
Score = 29.1 bits (62), Expect = 1.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 389 RSRIDCILYTCVYKPQCRYNYXKLN 463
+ R+ C LY C ++P +NY L+
Sbjct: 46 KDRLKCYLYECCHEPDVNFNYHTLD 70
>Z70034-13|CAC44293.1| 350|Caenorhabditis elegans Hypothetical
protein C18E9.11a protein.
Length = 350
Score = 29.1 bits (62), Expect = 1.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 389 RSRIDCILYTCVYKPQCRYNYXKLN 463
+ R+ C LY C ++P +NY L+
Sbjct: 40 KDRLKCYLYECCHEPDVNFNYHTLD 64
>Z49910-11|CAC44292.1| 356|Caenorhabditis elegans Hypothetical
protein C18E9.11b protein.
Length = 356
Score = 29.1 bits (62), Expect = 1.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 389 RSRIDCILYTCVYKPQCRYNYXKLN 463
+ R+ C LY C ++P +NY L+
Sbjct: 46 KDRLKCYLYECCHEPDVNFNYHTLD 70
>Z49910-10|CAC44291.1| 350|Caenorhabditis elegans Hypothetical
protein C18E9.11a protein.
Length = 350
Score = 29.1 bits (62), Expect = 1.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 389 RSRIDCILYTCVYKPQCRYNYXKLN 463
+ R+ C LY C ++P +NY L+
Sbjct: 40 KDRLKCYLYECCHEPDVNFNYHTLD 64
>AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical
protein Y105E8A.23b protein.
Length = 1156
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 324 IFKKNPFDFLFFSTK*LEPLYIDP 395
+F KNPF+F+ FST L P+ + P
Sbjct: 522 LFDKNPFNFIVFSTSNL-PMIVPP 544
>AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical
protein Y105E8A.23a protein.
Length = 1138
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 324 IFKKNPFDFLFFSTK*LEPLYIDP 395
+F KNPF+F+ FST L P+ + P
Sbjct: 522 LFDKNPFNFIVFSTSNL-PMIVPP 544
>AC199169-6|ABO33256.1| 502|Caenorhabditis elegans Hypothetical
protein F38A1.5 protein.
Length = 502
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -3
Query: 272 SYNFKLIVQHDFTHDFFQSLIKVLYQYS*VAHLIGNCY 159
++N+K H+F H + Q L+++L + VA+ G C+
Sbjct: 19 THNYKDPSYHEFFHIWLQMLLQLLLPIALVAYASGACF 56
>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 278 VCSYNFKLIVQHDFTHDFFQSLIKVLYQY 192
V +Y+ L+ QH H + QSLI +LY+Y
Sbjct: 1343 VTNYSLALLTQHT-RHLWLQSLILILYKY 1370
>Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 278 VCSYNFKLIVQHDFTHDFFQSLIKVLYQY 192
V +Y+ L+ QH H + QSLI +LY+Y
Sbjct: 124 VTNYSLALLTQHT-RHLWLQSLILILYKY 151
>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 278 VCSYNFKLIVQHDFTHDFFQSLIKVLYQY 192
V +Y+ L+ QH H + QSLI +LY+Y
Sbjct: 1343 VTNYSLALLTQHT-RHLWLQSLILILYKY 1370
>Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 278 VCSYNFKLIVQHDFTHDFFQSLIKVLYQY 192
V +Y+ L+ QH H + QSLI +LY+Y
Sbjct: 124 VTNYSLALLTQHT-RHLWLQSLILILYKY 151
>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
Length = 2084
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 278 VCSYNFKLIVQHDFTHDFFQSLIKVLYQY 192
V +Y+ L+ QH H + QSLI +LY+Y
Sbjct: 1346 VTNYSLALLTQHT-RHLWLQSLILILYKY 1373
>Z93393-7|CAB07694.1| 383|Caenorhabditis elegans Hypothetical
protein Y48E1B.8 protein.
Length = 383
Score = 26.6 bits (56), Expect = 8.9
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -1
Query: 382 NGSNYFVEKNKKSKGFFLKISRQ 314
NG+N+F+ N +++ FF K+S +
Sbjct: 215 NGANWFIRANNETQFFFEKLSEK 237
>Z49907-11|CAF31469.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = +1
Query: 40 FGIKIRYEGLVCLTCLQIIFNSCVLYGVFIQNNYVELCFR*QFPIRCATYE 192
F +K + G + TC I+F + Q+ + ++ +FP C E
Sbjct: 235 FAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTRFPTDCFLVE 285
>Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = +1
Query: 40 FGIKIRYEGLVCLTCLQIIFNSCVLYGVFIQNNYVELCFR*QFPIRCATYE 192
F +K + G + TC I+F + Q+ + ++ +FP C E
Sbjct: 266 FAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTRFPTDCFLVE 316
>Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = +1
Query: 40 FGIKIRYEGLVCLTCLQIIFNSCVLYGVFIQNNYVELCFR*QFPIRCATYE 192
F +K + G + TC I+F + Q+ + ++ +FP C E
Sbjct: 266 FAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTRFPTDCFLVE 316
>Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = +1
Query: 40 FGIKIRYEGLVCLTCLQIIFNSCVLYGVFIQNNYVELCFR*QFPIRCATYE 192
F +K + G + TC I+F + Q+ + ++ +FP C E
Sbjct: 235 FAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTRFPTDCFLVE 285
>Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = +1
Query: 40 FGIKIRYEGLVCLTCLQIIFNSCVLYGVFIQNNYVELCFR*QFPIRCATYE 192
F +K + G + TC I+F + Q+ + ++ +FP C E
Sbjct: 266 FAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTRFPTDCFLVE 316
>Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = +1
Query: 40 FGIKIRYEGLVCLTCLQIIFNSCVLYGVFIQNNYVELCFR*QFPIRCATYE 192
F +K + G + TC I+F + Q+ + ++ +FP C E
Sbjct: 266 FAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTRFPTDCFLVE 316
>AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type
chloride channel CLH-2b protein.
Length = 880
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = +1
Query: 40 FGIKIRYEGLVCLTCLQIIFNSCVLYGVFIQNNYVELCFR*QFPIRCATYE 192
F +K + G + TC I+F + Q+ + ++ +FP C E
Sbjct: 266 FAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTRFPTDCFLVE 316
>AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 844
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = +1
Query: 40 FGIKIRYEGLVCLTCLQIIFNSCVLYGVFIQNNYVELCFR*QFPIRCATYE 192
F +K + G + TC I+F + Q+ + ++ +FP C E
Sbjct: 235 FAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTRFPTDCFLVE 285
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,630,006
Number of Sequences: 27780
Number of extensions: 220357
Number of successful extensions: 412
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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