Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_C07
         (423 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0834 - 21626491-21626508,21626720-21626843,21626927-216270...    98   3e-21
03_05_1069 + 30118930-30120120                                         29   1.5  
01_01_0101 - 766382-767487,767599-767756,767900-768615                 28   3.6  
10_08_0352 + 17091637-17091945,17092049-17096617,17096975-170971...    27   6.2  

>08_02_0834 -
           21626491-21626508,21626720-21626843,21626927-21627012,
           21627869-21627874
          Length = 77

 Score = 97.9 bits (233), Expect = 3e-21
 Identities = 40/69 (57%), Positives = 55/69 (79%)
 Frame = +1

Query: 148 ERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKA 327
           +R+NI+SQLEHLQ+KY+GTGHAD  ++EW +N  RDS  SY+GH  +L+YF+I ENES  
Sbjct: 5   DRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFSIAENESIG 64

Query: 328 RVKFNLMER 354
           R ++N M+R
Sbjct: 65  RERYNFMQR 73


>03_05_1069 + 30118930-30120120
          Length = 396

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +1

Query: 202 TGHADTTKYEWLMNQHRDSCCSYM-GHPDLLSYFAIVE-NESKARVKFNLME 351
           +G AD T Y W  +    SC S + GH + +   AIVE N+  A V  + ++
Sbjct: 281 SGSADNTIYVWRRDGGVHSCLSVLTGHTEPIRCLAIVEDNKDNAAVPVDAVD 332


>01_01_0101 - 766382-767487,767599-767756,767900-768615
          Length = 659

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 309 YDRKVTQQIRMTHVAAARVAMLVHKPFIFCSVGVAC 202
           YDR + QQ+ +  ++AA VA +       C +G+ C
Sbjct: 564 YDRLIEQQVGVGEISAATVANMHELERKLCIIGLHC 599


>10_08_0352 + 17091637-17091945,17092049-17096617,17096975-17097187,
            17097266-17097494,17097857-17097981
          Length = 1814

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +1

Query: 226  YEWLMNQHRDSCCSYMGHPDLLSYFA-IVENESKARVKFNLMERMLQPCGPPPEKPEDXT 402
            Y  LMNQ+         + D   +F+      + A   F++++  ++P  PPPEK E+  
Sbjct: 1617 YRKLMNQNSKVGKEATSNSDCPQFFSPSFSLLTFALESFSVVDEEVKPISPPPEKEEEEA 1676

Query: 403  L 405
            +
Sbjct: 1677 I 1677


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,215,532
Number of Sequences: 37544
Number of extensions: 161746
Number of successful extensions: 411
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 778540620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)