Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_C03
(429 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 117 4e-27
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 117 4e-27
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 103 6e-23
07_03_1414 - 26403361-26403969 31 0.30
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 31 0.39
07_03_1422 + 26462871-26463434,26463772-26463897 30 0.69
07_03_1413 - 26396426-26396890 30 0.69
02_04_0587 + 24110333-24110584,24111193-24111261,24112347-241128... 28 2.8
05_03_0515 + 14930736-14932697 27 8.5
04_04_1363 - 32898345-32898371,32898986-32899837,32900234-329005... 27 8.5
01_03_0285 - 14604499-14604608,14604692-14605203,14605339-146054... 27 8.5
01_01_0697 - 5389071-5389487,5390301-5390390,5390472-5390536,539... 27 8.5
01_01_0191 - 1669631-1669924 27 8.5
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 117 bits (282), Expect = 4e-27
Identities = 51/77 (66%), Positives = 62/77 (80%)
Frame = +1
Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
NPLFEKRPK F IG + P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLD
Sbjct: 22 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLD 81
Query: 373 KTTAXGLFKILEKYRPE 423
K A LFK+L KYRPE
Sbjct: 82 KNLATNLFKMLLKYRPE 98
>08_02_0211 -
14333553-14333684,14333795-14333887,14334019-14334105,
14334220-14334389,14334985-14335186,14335604-14335606
Length = 228
Score = 117 bits (282), Expect = 4e-27
Identities = 51/77 (66%), Positives = 62/77 (80%)
Frame = +1
Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
NPLFEKRPK F IG + P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLD
Sbjct: 6 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLD 65
Query: 373 KTTAXGLFKILEKYRPE 423
K A LFK+L KYRPE
Sbjct: 66 KNLATNLFKMLLKYRPE 82
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 103 bits (247), Expect = 6e-23
Identities = 46/79 (58%), Positives = 59/79 (74%)
Frame = +1
Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
NPLFEKRPK F IG + P +DL RFVRWPK +RIQRQ+ VL++RLKVPP +NQFT+TLD
Sbjct: 23 NPLFEKRPKQFGIGGALPPRKDLHRFVRWPKAVRIQRQRRVLKQRLKVPPALNQFTRTLD 82
Query: 373 KTTAXGLFKILEKYRPETE 429
K ++L++ + E E
Sbjct: 83 KNLGCQKERLLKRAQAEAE 101
>07_03_1414 - 26403361-26403969
Length = 202
Score = 31.5 bits (68), Expect = 0.30
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -1
Query: 303 ALDADILGPSYKSGQVTSWLNALTNGKVLWPLLEERIHDLLGLNLFD 163
AL A + P + G++ + + +T G+ L P LEE + GL L+D
Sbjct: 76 ALSAAVSNPGFFFGRMVVFNDPVTEGRALPPSLEETVVRAQGLYLYD 122
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 31.1 bits (67), Expect = 0.39
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 291 PHPAPEGCTSASSESAPSDQP 353
P PAPE +A+ E+APSD P
Sbjct: 53 PQPAPEEAPAAAEEAAPSDDP 73
>07_03_1422 + 26462871-26463434,26463772-26463897
Length = 229
Score = 30.3 bits (65), Expect = 0.69
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -1
Query: 303 ALDADILGPSYKSGQVTSWLNALTNGKVLWPLLEERIHDLLGLNLFD 163
AL + P Y G+V + + +T G+ L P LEE GL L D
Sbjct: 74 ALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 120
>07_03_1413 - 26396426-26396890
Length = 154
Score = 30.3 bits (65), Expect = 0.69
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -1
Query: 303 ALDADILGPSYKSGQVTSWLNALTNGKVLWPLLEERIHDLLGLNLFD 163
AL + P Y G+V + + +T G+ L P LEE GL L D
Sbjct: 28 ALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 74
>02_04_0587 +
24110333-24110584,24111193-24111261,24112347-24112850,
24113094-24113336
Length = 355
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -3
Query: 238 PDQWQSSLASSRREDSRSSWAQPF*PPMGRR 146
P SSLA +RR +R AQP PP RR
Sbjct: 24 PSSAASSLAFARRAAARPLRAQPLLPPAARR 54
>05_03_0515 + 14930736-14932697
Length = 653
Score = 26.6 bits (56), Expect = 8.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -3
Query: 289 YTWAILQIWTSHELAECPDQWQSSLASSRREDSRSSWA 176
+TWA LQ W H LA+ W + S + +S S W+
Sbjct: 324 WTWASLQYWKYHRLADA--AWY--VFKSLQTESMSWWS 357
>04_04_1363 -
32898345-32898371,32898986-32899837,32900234-32900500,
32900723-32901025,32902329-32902433,32903361-32903548,
32903628-32903721
Length = 611
Score = 26.6 bits (56), Expect = 8.5
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Frame = +3
Query: 162 GQKG*AQEDRESSLREEAKELCHWSGHSANS*LVQICKMAQVYPHPAPEGCTSASSESAP 341
GQ+ A + R++ EE + CH +++ + Q + P+GC+S AP
Sbjct: 386 GQEA-AADQRDA--HEEHHDHCHAQSQGSSNVAGTMTGKNQEQGNENPDGCSSYCDIKAP 442
Query: 342 SD-QPIYPDTG-----QDYS*XPFQDFGEIQ 416
SD P D D+S F D G+ Q
Sbjct: 443 SDGSPSMSDATLNSKVSDWSSSSFHDHGDNQ 473
>01_03_0285 -
14604499-14604608,14604692-14605203,14605339-14605418,
14605597-14605699,14605759-14605907,14606088-14606180,
14606289-14606675,14607690-14608124,14608198-14608311,
14608405-14608453,14608684-14608843,14608941-14609499
Length = 916
Score = 26.6 bits (56), Expect = 8.5
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 288 ILGPSYKSGQVTSWLNALTNG 226
++ PS KSG++TS L +TNG
Sbjct: 89 LVSPSSKSGKLTSKLRQVTNG 109
>01_01_0697 -
5389071-5389487,5390301-5390390,5390472-5390536,
5391106-5391176,5391297-5391335,5392938-5393350
Length = 364
Score = 26.6 bits (56), Expect = 8.5
Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = -2
Query: 386 LAVVLSSV--WVNWLIGGGTFRRR 321
LAV L S+ WV L+GGG +RRR
Sbjct: 37 LAVALHSLLLWVFLLVGGGGWRRR 60
>01_01_0191 - 1669631-1669924
Length = 97
Score = 26.6 bits (56), Expect = 8.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 395 KRPLAVVLSSVWVNWLIGGG 336
+R LA++L W WL GGG
Sbjct: 12 RRRLALILCLAWALWLHGGG 31
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,468,740
Number of Sequences: 37544
Number of extensions: 220212
Number of successful extensions: 714
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 802495716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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