Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_C03
         (429 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal prot...   145   3e-35
AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p pro...   145   3e-35
AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,...   145   3e-35
AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,...   145   3e-35
AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,...   145   3e-35
AY058343-1|AAL13572.1|  403|Drosophila melanogaster GH11867p pro...    29   2.6  
AE014297-1960|AAN13634.1|  403|Drosophila melanogaster CG31344-P...    29   2.6  
AY118473-1|AAM49842.1| 1162|Drosophila melanogaster GM14375p pro...    27   8.1  

>X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal protein
           L7a protein.
          Length = 271

 Score =  145 bits (351), Expect = 3e-35
 Identities = 65/78 (83%), Positives = 72/78 (92%)
 Frame = +1

Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
           N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93

Query: 373 KTTAXGLFKILEKYRPET 426
           KTTA  LFK+LEKYRPE+
Sbjct: 94  KTTAVKLFKLLEKYRPES 111


>AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p
           protein.
          Length = 271

 Score =  145 bits (351), Expect = 3e-35
 Identities = 65/78 (83%), Positives = 72/78 (92%)
 Frame = +1

Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
           N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93

Query: 373 KTTAXGLFKILEKYRPET 426
           KTTA  LFK+LEKYRPE+
Sbjct: 94  KTTAVKLFKLLEKYRPES 111


>AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,
           isoform D protein.
          Length = 271

 Score =  145 bits (351), Expect = 3e-35
 Identities = 65/78 (83%), Positives = 72/78 (92%)
 Frame = +1

Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
           N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93

Query: 373 KTTAXGLFKILEKYRPET 426
           KTTA  LFK+LEKYRPE+
Sbjct: 94  KTTAVKLFKLLEKYRPES 111


>AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,
           isoform C protein.
          Length = 271

 Score =  145 bits (351), Expect = 3e-35
 Identities = 65/78 (83%), Positives = 72/78 (92%)
 Frame = +1

Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
           N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93

Query: 373 KTTAXGLFKILEKYRPET 426
           KTTA  LFK+LEKYRPE+
Sbjct: 94  KTTAVKLFKLLEKYRPES 111


>AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,
           isoform A protein.
          Length = 271

 Score =  145 bits (351), Expect = 3e-35
 Identities = 65/78 (83%), Positives = 72/78 (92%)
 Frame = +1

Query: 193 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 372
           N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93

Query: 373 KTTAXGLFKILEKYRPET 426
           KTTA  LFK+LEKYRPE+
Sbjct: 94  KTTAVKLFKLLEKYRPES 111


>AY058343-1|AAL13572.1|  403|Drosophila melanogaster GH11867p
           protein.
          Length = 403

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -3

Query: 271 QIWTSHELAECPDQWQSSLASSRREDSRSSWA 176
           Q W +H +A+   ++ +S+A+ RR  SRSS A
Sbjct: 143 QAWYNHNIADRGSRFWTSIAAVRRAHSRSSHA 174


>AE014297-1960|AAN13634.1|  403|Drosophila melanogaster CG31344-PA
           protein.
          Length = 403

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -3

Query: 271 QIWTSHELAECPDQWQSSLASSRREDSRSSWA 176
           Q W +H +A+   ++ +S+A+ RR  SRSS A
Sbjct: 143 QAWYNHNIADRGSRFWTSIAAVRRAHSRSSHA 174


>AY118473-1|AAM49842.1| 1162|Drosophila melanogaster GM14375p
           protein.
          Length = 1162

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +3

Query: 282 QVYPHPAPEGCTSASSESAPSDQPIYPDTGQDYS 383
           +V+P  A  GC S  S+S P D P      ++YS
Sbjct: 478 EVFPRLAHIGCESFGSKSGPLDIPFALRAEEEYS 511


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,456,943
Number of Sequences: 53049
Number of extensions: 337606
Number of successful extensions: 1021
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)