Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_C02
         (442 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0101 + 8397177-8397380,8397623-8397803,8398633-8398682,839...    31   0.54 
06_01_0763 + 5712466-5712721,5714302-5715743                           27   5.1  
04_01_0563 - 7216923-7217300,7217401-7217544,7217680-7218729           27   8.8  
01_05_0159 + 18716055-18716272,18716900-18718529,18718622-187186...    27   8.8  

>05_03_0101 +
           8397177-8397380,8397623-8397803,8398633-8398682,
           8398753-8398823,8400263-8400335,8400560-8400604
          Length = 207

 Score = 30.7 bits (66), Expect = 0.54
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = -1

Query: 421 GVSDDSCTIPSFIXCFLVVLTYYILCSICLI*FMFTVCISDTDAYTHTGYDW 266
           GVS+ +  +  FI CFL V+   +  +I  + FM T    D+      GY W
Sbjct: 155 GVSNMTAKMSYFIICFLRVIA-LMQSAIVSLDFMVTTVAEDSSTANSKGYKW 205


>06_01_0763 + 5712466-5712721,5714302-5715743
          Length = 565

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 107 YRKKNEMSRSQNNTTDDYSAKIDMC 181
           YR+ +E  RS  N  DD+ A +D C
Sbjct: 148 YRRASERLRSGQNAGDDFVATVDGC 172


>04_01_0563 - 7216923-7217300,7217401-7217544,7217680-7218729
          Length = 523

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -1

Query: 421 GVSDDSCTIPSFIXCFLVVLTYYILCSIC 335
           GV  D+  +P+F+ CF    + +++C+ C
Sbjct: 374 GVRHDAQMLPNFLKCFPNAESLHVVCAKC 402


>01_05_0159 +
           18716055-18716272,18716900-18718529,18718622-18718693,
           18718800-18719213
          Length = 777

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +1

Query: 19  YVKAIVLQTNFYSKNINR*LY*STCLGFRIQKKKRNVPQSKQHN 150
           +  A+  Q+ F    I+R L    C GFR +++KRN  + K+ N
Sbjct: 6   HANAVYCQSRFPPIGIHRRLQVG-CGGFRRERQKRNKNKEKERN 48


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,411,905
Number of Sequences: 37544
Number of extensions: 183410
Number of successful extensions: 404
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 404
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 835800280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)