Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_B05
(539 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 170 6e-43
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 170 6e-43
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 170 6e-43
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 170 6e-43
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 170 6e-43
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 170 6e-43
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 170 6e-43
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 170 6e-43
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 170 6e-43
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 168 2e-42
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 167 4e-42
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 99 2e-21
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 95 2e-20
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 95 2e-20
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 94 5e-20
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 94 5e-20
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 79 3e-15
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 72 2e-13
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 48 4e-06
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 35 0.043
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 35 0.043
U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protei... 31 0.70
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 29 2.1
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 29 2.1
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 29 2.1
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 29 2.1
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 29 2.1
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 4.9
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 28 4.9
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 6.5
Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 170 bits (413), Expect = 6e-43
Identities = 77/83 (92%), Positives = 78/83 (93%)
Frame = +1
Query: 280 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVA 459
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD EKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 460 PEEHPVLLTEAPLNPKANXEKMT 528
PEEHPVLLTEAPLNPKAN EKMT
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMT 121
Score = 95.5 bits (227), Expect = 2e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 165 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 170 bits (413), Expect = 6e-43
Identities = 77/83 (92%), Positives = 78/83 (93%)
Frame = +1
Query: 280 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVA 459
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD EKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 460 PEEHPVLLTEAPLNPKANXEKMT 528
PEEHPVLLTEAPLNPKAN EKMT
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMT 121
Score = 94.3 bits (224), Expect = 5e-20
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +3
Query: 165 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 293
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 170 bits (413), Expect = 6e-43
Identities = 77/83 (92%), Positives = 78/83 (93%)
Frame = +1
Query: 280 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVA 459
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD EKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 460 PEEHPVLLTEAPLNPKANXEKMT 528
PEEHPVLLTEAPLNPKAN EKMT
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMT 121
Score = 95.5 bits (227), Expect = 2e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 165 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 170 bits (413), Expect = 6e-43
Identities = 77/83 (92%), Positives = 78/83 (93%)
Frame = +1
Query: 280 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVA 459
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD EKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 460 PEEHPVLLTEAPLNPKANXEKMT 528
PEEHPVLLTEAPLNPKAN EKMT
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMT 121
Score = 95.5 bits (227), Expect = 2e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 165 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 170 bits (413), Expect = 6e-43
Identities = 77/83 (92%), Positives = 78/83 (93%)
Frame = +1
Query: 280 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVA 459
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD EKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 460 PEEHPVLLTEAPLNPKANXEKMT 528
PEEHPVLLTEAPLNPKAN EKMT
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMT 121
Score = 95.5 bits (227), Expect = 2e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 165 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 170 bits (413), Expect = 6e-43
Identities = 77/83 (92%), Positives = 78/83 (93%)
Frame = +1
Query: 280 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVA 459
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD EKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 460 PEEHPVLLTEAPLNPKANXEKMT 528
PEEHPVLLTEAPLNPKAN EKMT
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMT 121
Score = 92.7 bits (220), Expect = 2e-19
Identities = 39/43 (90%), Positives = 43/43 (100%)
Frame = +3
Query: 165 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 293
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 170 bits (413), Expect = 6e-43
Identities = 77/83 (92%), Positives = 78/83 (93%)
Frame = +1
Query: 280 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVA 459
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD EKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 460 PEEHPVLLTEAPLNPKANXEKMT 528
PEEHPVLLTEAPLNPKAN EKMT
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMT 121
Score = 95.5 bits (227), Expect = 2e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 165 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 170 bits (413), Expect = 6e-43
Identities = 77/83 (92%), Positives = 78/83 (93%)
Frame = +1
Query: 280 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVA 459
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD EKIWHHTFYNELRVA
Sbjct: 25 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 84
Query: 460 PEEHPVLLTEAPLNPKANXEKMT 528
PEEHPVLLTEAPLNPKAN EKMT
Sbjct: 85 PEEHPVLLTEAPLNPKANREKMT 107
Score = 56.8 bits (131), Expect = 9e-09
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +3
Query: 219 KAGFAGDDAPRAVFPSIVGRPRHQG 293
+AGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQG 29
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 170 bits (413), Expect = 6e-43
Identities = 77/83 (92%), Positives = 78/83 (93%)
Frame = +1
Query: 280 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVA 459
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD EKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 460 PEEHPVLLTEAPLNPKANXEKMT 528
PEEHPVLLTEAPLNPKAN EKMT
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMT 121
Score = 95.5 bits (227), Expect = 2e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 165 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 168 bits (409), Expect = 2e-42
Identities = 75/83 (90%), Positives = 78/83 (93%)
Frame = +1
Query: 280 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVA 459
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD EKIWHHTFYNELR+A
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIA 97
Query: 460 PEEHPVLLTEAPLNPKANXEKMT 528
PEEHPVLLTEAPLNPK+N EKMT
Sbjct: 98 PEEHPVLLTEAPLNPKSNREKMT 120
Score = 89.0 bits (211), Expect = 2e-18
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +3
Query: 171 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 293
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 167 bits (406), Expect = 4e-42
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +1
Query: 298 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEHPV 477
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD EKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 478 LLTEAPLNPKANXEKMT 528
LLTEAPLNPKAN EKMT
Sbjct: 61 LLTEAPLNPKANREKMT 77
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 98.7 bits (235), Expect = 2e-21
Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = +1
Query: 280 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDXEKIWHHTF-YNELRV 456
P VM G D ++G +A+S RG+ +++YP+EHGIV NW D EKIW + F ++L++
Sbjct: 41 PKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKI 100
Query: 457 APEEHPVLLTEAPLNPKANXEK 522
PEEHPVLLT+APLNP N E+
Sbjct: 101 FPEEHPVLLTDAPLNPLKNRER 122
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +3
Query: 189 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 287
+V+DNGSG+ KAGFAG+ P+ F + VGRP++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKY 43
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 95.5 bits (227), Expect = 2e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 165 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 94.3 bits (224), Expect = 5e-20
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = +1
Query: 280 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDXEKI 423
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD EKI
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 95.5 bits (227), Expect = 2e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 165 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 94.3 bits (224), Expect = 5e-20
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = +1
Query: 280 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDXEKI 423
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD EKI
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 94.3 bits (224), Expect = 5e-20
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +3
Query: 165 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 293
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 94.3 bits (224), Expect = 5e-20
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = +1
Query: 280 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDXEKI 423
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD EKI
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 94.3 bits (224), Expect = 5e-20
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +3
Query: 165 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 293
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 89.0 bits (211), Expect = 2e-18
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +1
Query: 280 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD 411
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD 82
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 78.6 bits (185), Expect = 3e-15
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = +1
Query: 316 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDXEKIWHHTFYNE-LRVAPEEHPVLLTEA 492
KD VG+E R +L + YP+++GIV NWDD +W HTF E L + P+E +LLTE
Sbjct: 53 KDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEP 112
Query: 493 PLNPKANXEKM 525
PLNP +N EKM
Sbjct: 113 PLNPNSNREKM 123
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 189 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 281
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 72.1 bits (169), Expect = 2e-13
Identities = 35/76 (46%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +1
Query: 295 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEH 471
V G+ D ++GDEA S T+KYPI HGIV +WD E+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 472 PVLLTEAPLNPKANXE 519
LLTE PLN N E
Sbjct: 116 FFLLTEPPLNTPENRE 131
Score = 36.7 bits (81), Expect = 0.011
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 165 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 272
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 48.0 bits (109), Expect = 4e-06
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +1
Query: 379 IEHGIVTNWDDXEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANXEKMT 528
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A EK+T
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLT 143
Score = 33.5 bits (73), Expect = 0.100
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 174 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 272
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.043
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 313 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDXEKIWHHTF 438
+K +V E + +L Y PIE G V NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.043
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 313 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDXEKIWHHTF 438
+K +V E + +L Y PIE G V NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protein
58 protein.
Length = 305
Score = 30.7 bits (66), Expect = 0.70
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +3
Query: 174 EEVAALVVDNGS-GMCKAGFAGDDAPRAV--FPSIVGRPRHQGRDGRYGTEG 320
++++ L D G C AG G PR P I G P G GR+GT G
Sbjct: 146 DDISVLRHDPGRCAQCPAGPMGPPGPRGPPGVPGITGAPGLDGIPGRHGTPG 197
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +3
Query: 231 AGDDAPRAVFPSIVGRPRHQGRDGRYGTEGLLCR 332
AG PR P VG P QGRDG G G + R
Sbjct: 147 AGPPGPRGA-PGSVGEPGPQGRDGMGGRPGNMGR 179
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +3
Query: 450 ACRPRGTPSPAH*GSPQPQGQXREDDPRS 536
AC GT SPA GSP PQ D RS
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRS 1258
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 244 ASSPAKPALHIPEPLSTTNAATSS 173
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +3
Query: 450 ACRPRGTPSPAH*GSPQPQGQXREDDPRS 536
AC GT SPA GSP PQ D RS
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRS 1271
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 244 ASSPAKPALHIPEPLSTTNAATSS 173
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +3
Query: 450 ACRPRGTPSPAH*GSPQPQGQXREDDPRS 536
AC GT SPA GSP PQ D RS
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRS 1259
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 244 ASSPAKPALHIPEPLSTTNAATSS 173
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +3
Query: 450 ACRPRGTPSPAH*GSPQPQGQXREDDPRS 536
AC GT SPA GSP PQ D RS
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRS 1271
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 244 ASSPAKPALHIPEPLSTTNAATSS 173
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 4.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 219 KAGFAGDDAPRAVFPSIVGRPRHQG 293
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 219 KAGFAGDDAPRAVFPSIVGRPRHQGRDGRYGTEG 320
++G AG P+ P G+P H G DG GT G
Sbjct: 224 RSGGAGTPGPQGP-PGPSGQPGHSGNDGVPGTPG 256
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 405 PVSDDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHH 295
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
>Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical
protein F22D6.10 protein.
Length = 302
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = +3
Query: 192 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGRDGRYGTEG 320
+ S C G + PR P G P G DG+ G +G
Sbjct: 78 IFKRNSDSCNCGAKASNCPRGP-PGPPGEPGENGTDGQAGQDG 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,252,392
Number of Sequences: 27780
Number of extensions: 294032
Number of successful extensions: 1088
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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