Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_B03
         (618 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46787-13|CAA86748.1|  281|Caenorhabditis elegans Hypothetical p...   130   8e-31
AC024779-2|AAK68485.1|  299|Caenorhabditis elegans Serpentine re...    31   0.87 
AC024779-1|AAP86615.1|  304|Caenorhabditis elegans Serpentine re...    31   0.87 
Z66500-7|CAA91311.1|  182|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AC006833-12|AAF60942.1|  218|Caenorhabditis elegans Enhancer of ...    29   3.5  
AC006833-11|AAU87801.1|  175|Caenorhabditis elegans Enhancer of ...    29   3.5  
AC006833-10|AAU87800.1|  262|Caenorhabditis elegans Enhancer of ...    29   3.5  
U40938-2|AAQ65206.1|  463|Caenorhabditis elegans Hypothetical pr...    28   4.6  
U40938-1|AAA81695.2|  465|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z49068-7|CAA88859.1|  552|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z46787-13|CAA86748.1|  281|Caenorhabditis elegans Hypothetical
           protein C16C10.10 protein.
          Length = 281

 Score =  130 bits (314), Expect = 8e-31
 Identities = 54/85 (63%), Positives = 66/85 (77%)
 Frame = +1

Query: 187 VSGRALHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGYG 366
           ++ RALH+VFKVA+R  T  F+  +L MKVLRHEEF +GCEA CNGPY  RWSKTM+GYG
Sbjct: 1   MTARALHYVFKVANRAKTIDFFTNVLNMKVLRHEEFEKGCEATCNGPYNGRWSKTMIGYG 60

Query: 367 PEDTHFVVELTYNYGVTHXEQGNDF 441
            ED HFV+E+TYNY +   E GND+
Sbjct: 61  SEDEHFVLEITYNYPIHKYELGNDY 85


>AC024779-2|AAK68485.1|  299|Caenorhabditis elegans Serpentine
           receptor, class x protein50, isoform a protein.
          Length = 299

 Score = 30.7 bits (66), Expect = 0.87
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
 Frame = -1

Query: 339 SVCIRSIASCLTSFTKLFMAENL----HSEDFPIKFCC*SPICDFKYEMKSTTANHFAI* 172
           ++ IR + S   SF +L  ++++    HS  F   F   SP+C F  E+  T ++ F   
Sbjct: 7   ALLIRRLPSLKNSFGRLTASQSIGDAIHSTVFAFIF---SPMCFFSVEIMKTYSSAFGHI 63

Query: 171 QL*AYDFSSELSDLC 127
            L AYD S+  S LC
Sbjct: 64  LLIAYDIST-YSHLC 77


>AC024779-1|AAP86615.1|  304|Caenorhabditis elegans Serpentine
           receptor, class x protein50, isoform b protein.
          Length = 304

 Score = 30.7 bits (66), Expect = 0.87
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
 Frame = -1

Query: 339 SVCIRSIASCLTSFTKLFMAENL----HSEDFPIKFCC*SPICDFKYEMKSTTANHFAI* 172
           ++ IR + S   SF +L  ++++    HS  F   F   SP+C F  E+  T ++ F   
Sbjct: 18  ALLIRRLPSLKNSFGRLTASQSIGDAIHSTVFAFIF---SPMCFFSVEIMKTYSSAFGHI 74

Query: 171 QL*AYDFSSELSDLC 127
            L AYD S+  S LC
Sbjct: 75  LLIAYDIST-YSHLC 88


>Z66500-7|CAA91311.1|  182|Caenorhabditis elegans Hypothetical
           protein T05C12.9 protein.
          Length = 182

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = -1

Query: 534 STYFRPLCSLIGQLLVCALFRLSLDCTVMXKEIISLFVMRYTIVVGQ 394
           S+ F  LCSL+  +++   +RL++  T+    I  + V+ +TI V Q
Sbjct: 52  SSGFTVLCSLLSNVIIKTKYRLAMTVTLGISVISLVTVIGFTIAVYQ 98


>AC006833-12|AAF60942.1|  218|Caenorhabditis elegans Enhancer of
           hand mutation hnd-1protein 3, isoform b protein.
          Length = 218

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -1

Query: 288 FMAENLHSEDFPIKFCC*SPICDFKYEMKS--TTANH 184
           ++   LHS+D P K      +CD KY+  +    ANH
Sbjct: 180 YLHSGLHSDDIPFKCSLCGSLCDGKYDFAAHLVYANH 216


>AC006833-11|AAU87801.1|  175|Caenorhabditis elegans Enhancer of
           hand mutation hnd-1protein 3, isoform c protein.
          Length = 175

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -1

Query: 288 FMAENLHSEDFPIKFCC*SPICDFKYEMKS--TTANH 184
           ++   LHS+D P K      +CD KY+  +    ANH
Sbjct: 137 YLHSGLHSDDIPFKCSLCGSLCDGKYDFAAHLVYANH 173


>AC006833-10|AAU87800.1|  262|Caenorhabditis elegans Enhancer of
           hand mutation hnd-1protein 3, isoform a protein.
          Length = 262

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -1

Query: 288 FMAENLHSEDFPIKFCC*SPICDFKYEMKS--TTANH 184
           ++   LHS+D P K      +CD KY+  +    ANH
Sbjct: 224 YLHSGLHSDDIPFKCSLCGSLCDGKYDFAAHLVYANH 260


>U40938-2|AAQ65206.1|  463|Caenorhabditis elegans Hypothetical
           protein D1009.3b protein.
          Length = 463

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 274 VLRHEEFSEGCEAACNGPYANRW-SKTMVGYGPEDTHFVVELT 399
           +LR E   E C+  C+  +AN W  +  V +G +   + +++T
Sbjct: 307 ILRIEIQGETCDLTCSKRFANTWVGEWKVNFGKKQDGYKIQIT 349


>U40938-1|AAA81695.2|  465|Caenorhabditis elegans Hypothetical
           protein D1009.3a protein.
          Length = 465

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 274 VLRHEEFSEGCEAACNGPYANRW-SKTMVGYGPEDTHFVVELT 399
           +LR E   E C+  C+  +AN W  +  V +G +   + +++T
Sbjct: 309 ILRIEIQGETCDLTCSKRFANTWVGEWKVNFGKKQDGYKIQIT 351


>Z49068-7|CAA88859.1|  552|Caenorhabditis elegans Hypothetical
           protein K01C8.8 protein.
          Length = 552

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/34 (29%), Positives = 21/34 (61%)
 Frame = +1

Query: 172 LNSKMVSGRALHFVFKVADRTLTAKFYREILGMK 273
           +N+K+  GR+L F FK   ++ +  F+  + G++
Sbjct: 377 INTKICRGRSLDFRFKTISKSSSMDFFTTVSGLE 410


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,028,779
Number of Sequences: 27780
Number of extensions: 254006
Number of successful extensions: 504
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)