Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_B02
(652 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0356 + 2557127-2557193,2557272-2557315,2557433-2557528,255... 54 1e-07
05_06_0234 - 26602660-26602728,26602814-26602988,26603077-266031... 42 3e-04
06_03_0740 - 24006485-24006629,24006821-24006864,24006954-240071... 41 0.001
01_06_0465 - 29573972-29574110,29574300-29574343,29574434-295746... 38 0.005
04_04_0122 - 22918146-22918220,22918455-22918496,22918586-229186... 31 0.80
02_04_0344 - 22171401-22171448,22171725-22171760,22171996-221720... 31 1.1
02_02_0456 + 10489544-10491064,10491506-10491632,10491633-10492606 30 1.8
07_03_1756 - 29239137-29239325,29239741-29240259,29240693-292408... 28 7.4
05_05_0163 + 22842955-22844371,22845519-22845592,22845913-22845948 28 7.4
01_01_0972 + 7672048-7672390,7672546-7672709,7672864-7672961,767... 27 9.8
>06_01_0356 +
2557127-2557193,2557272-2557315,2557433-2557528,
2559259-2559351,2559450-2559540,2559617-2559678,
2559754-2559938,2560022-2560199,2560293-2560336,
2560440-2560635,2560728-2560745,2560955-2561005
Length = 374
Score = 53.6 bits (123), Expect = 1e-07
Identities = 46/146 (31%), Positives = 63/146 (43%)
Frame = +3
Query: 213 HAEAMASLPPNVRRRIRALRTLXKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVN 392
H + + +L PNVR+R+ LR + + +IE KF+ E A R IVN
Sbjct: 47 HTDVLEALSPNVRKRVEYLREIQGQHDEIELKFFEERAALEAKYQKLYEPLYTKRYNIVN 106
Query: 393 GTYEPNDDECLNPWRDDTEEEELARAVQNAAITEGXXXXXXXXXXXXXXXNVKGIPDFWY 572
G E D +E A +NAA EG + KG+PDFW
Sbjct: 107 GVVEV----------DGGNDEP---ASENAA--EGKDA------------DAKGVPDFWL 139
Query: 573 NIXRNVSMLSEMMPEHDEPXLKCLQD 650
+ +LSE + E DEP LK L+D
Sbjct: 140 TAMKTNEVLSEEIQERDEPALKYLKD 165
>05_06_0234 -
26602660-26602728,26602814-26602988,26603077-26603120,
26603204-26603381,26603468-26603652,26603737-26603801,
26603985-26604066,26604342-26604434,26605096-26605191,
26605312-26605355,26605467-26605530
Length = 364
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = +3
Query: 213 HAEAMASLPPNVRRRIRALRTLXKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVN 392
H + + SL P VR+R+ LR + + D+EAKF+ E A R IVN
Sbjct: 46 HTDVLESLEPKVRKRVEVLREIQSQHDDLEAKFFEERAALEAKYQKMYEPLYSKRYEIVN 105
Query: 393 GTYE 404
G E
Sbjct: 106 GVVE 109
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 549 KGIPDFWYNIXRNVSMLSEMMPEHDEPXLKCLQD 650
KG+P+FW N +N +LSE + E DE LK L+D
Sbjct: 129 KGVPEFWLNAMKNHEILSEEIQERDEEALKYLKD 162
>06_03_0740 -
24006485-24006629,24006821-24006864,24006954-24007122,
24007226-24007413,24007572-24007634,24007992-24008084,
24009837-24009932,24010024-24010067,24010184-24010357,
24010764-24010974
Length = 408
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 549 KGIPDFWYNIXRNVSMLSEMMPEHDEPXLKCLQD 650
KG+PDFW N +N +L+E + E DE LK L+D
Sbjct: 208 KGVPDFWLNAMKNNEILAEEIHESDEEALKYLKD 241
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 213 HAEAMASLPPNVRRRIRALRTLXKEFVDIEAKFYSE 320
H + + SL P+VR+R+ L + + ++E KF+ E
Sbjct: 153 HVDVLESLAPSVRKRVDVLMEIQSQHDELEVKFFEE 188
>01_06_0465 -
29573972-29574110,29574300-29574343,29574434-29574602,
29574707-29574894,29575081-29575145,29575257-29575311,
29575502-29575594,29576035-29576130,29576259-29576302,
29576419-29576431
Length = 301
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 549 KGIPDFWYNIXRNVSMLSEMMPEHDEPXLKCLQD 650
KG+PDFW +N +L+E + E DE LK L+D
Sbjct: 103 KGVPDFWLKAMKNNEILAEEIHESDEEALKYLKD 136
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +3
Query: 213 HAEAMASLPPNVRRRIRALRTLXKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVN 392
H + + SL P VR+R+ L + + ++EAKF E A R+ IV+
Sbjct: 29 HVDVLESLAPVVRKRVDVLIEIQSQHDELEAKFLEEKAALEANYQKLYGPLYSKRSEIVS 88
Query: 393 GTYE 404
G E
Sbjct: 89 GVLE 92
>04_04_0122 -
22918146-22918220,22918455-22918496,22918586-22918642,
22918784-22918844,22919219-22919280,22919372-22919485,
22919565-22919636,22919824-22919874,22919990-22920112,
22921261-22921383
Length = 259
Score = 31.1 bits (67), Expect = 0.80
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 546 VKGIPDFWYNIXRNVSMLSEMMPEHDEPXLKCLQ 647
+K IPDFW + ML E++ E D+ K L+
Sbjct: 72 IKQIPDFWLTAFLSHPMLGELLTEDDQKIFKHLE 105
>02_04_0344 -
22171401-22171448,22171725-22171760,22171996-22172056,
22173246-22173304,22173384-22173497,22173575-22173646,
22173786-22173836,22173935-22174057,22175154-22175291
Length = 233
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 546 VKGIPDFWYNIXRNVSMLSEMMPEHDEPXLKCLQ 647
++ IPDFW + +LSE++ E D+ K L+
Sbjct: 77 IQTIPDFWLTAFLSHPLLSELLTEEDQKMFKYLE 110
>02_02_0456 + 10489544-10491064,10491506-10491632,10491633-10492606
Length = 873
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +3
Query: 81 VTTTHPKWS-LQKKKKSSEVVN*RNTC--LKSGVTRN-EMIAAITNRLHAEAMASLPPNV 248
++T H +WS Q++K E++ +++ L+ + N ++I R+H +A+L PN+
Sbjct: 27 LSTLHSRWSGKQQQKLQGELLQLQSSLQRLRDTLPANYDLIDRAEWRIHKHCVANLLPNI 86
Query: 249 RRRIRALRTLXKEFVDIEAKFYSEVHA 329
+ + L EF E K E +A
Sbjct: 87 KDAVYNADDLLDEFRWYEQKVALESNA 113
>07_03_1756 -
29239137-29239325,29239741-29240259,29240693-29240800,
29240856-29241155,29241730-29241831,29243042-29243209,
29243878-29243991,29244184-29244288,29244372-29244502,
29244794-29244918,29245001-29245172,29245277-29245316,
29245636-29245722,29245803-29245868,29246412-29246510,
29246714-29246836,29247066-29247107,29247195-29247260,
29247362-29247553,29247672-29247737,29248839-29249141
Length = 1038
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 378 ALIVNGTYEPNDDECLNPWRDDTEEEELARAVQNAAIT 491
A IV + EPN + N +D+T E+ A +NAA+T
Sbjct: 685 AAIVTASEEPNGGDSANKLKDETMEDP---ATENAAMT 719
>05_05_0163 + 22842955-22844371,22845519-22845592,22845913-22845948
Length = 508
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = -3
Query: 443 VITPWVETFIIIRFICAIHNKSSLFIKRLVKFFIFAFECMYFTVKLGLNVD 291
V+ PW+++F I + +H+K +L K +K A + + +K G+ +D
Sbjct: 459 VLPPWLDSFPIPNAVLCLHSKINLSGKNNMKNETLA-DILVINIKTGILMD 508
>01_01_0972 +
7672048-7672390,7672546-7672709,7672864-7672961,
7673040-7673361,7674021-7675220
Length = 708
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 206 ISDGRYHFITGHATFQTGVALVHH 135
I + R HF+ G A Q V L HH
Sbjct: 682 IQEVRQHFVLGAADIQPAVTLTHH 705
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,640,256
Number of Sequences: 37544
Number of extensions: 277641
Number of successful extensions: 584
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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