Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_B02
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical pr...    58   4e-09
L13200-4|AAA28191.2|  645|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AC006776-7|AAF60623.1|  361|Caenorhabditis elegans Serpentine re...    28   6.6  
AC024803-1|AAL05589.4|  433|Caenorhabditis elegans Hypothetical ...    27   8.7  

>U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical
           protein D2096.8 protein.
          Length = 316

 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 40/144 (27%), Positives = 61/144 (42%)
 Frame = +3

Query: 219 EAMASLPPNVRRRIRALRTLXKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGT 398
           + + +LP NV++R+ AL+ L  + + IE+ FY  VH                R  IV G 
Sbjct: 17  DMIQALPLNVKQRVCALKNLQMKTIQIESDFYKRVHELEIEFEGKFKSTFDQRKAIVAGE 76

Query: 399 YEPNDDECLNPWRDDTEEEELARAVQNAAITEGXXXXXXXXXXXXXXXNVKGIPDFWYNI 578
            EP  ++   P  +  E ++LA   + A                    + KGI DFW   
Sbjct: 77  VEPTKEQIDTPILEGLEGDQLAELYKAA----------------EADPSAKGIKDFWLTA 120

Query: 579 XRNVSMLSEMMPEHDEPXLKCLQD 650
            R   +++E + EHD P L  L D
Sbjct: 121 LRTHDLVAEAIEEHDVPILSYLTD 144


>L13200-4|AAA28191.2|  645|Caenorhabditis elegans Hypothetical
           protein ZK1236.1 protein.
          Length = 645

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 332 ECMYFTVKLGLNVDKLLXKSSQGADSPTNI 243
           EC++ + K GLNVDK+L        +PT I
Sbjct: 188 ECLHISAKSGLNVDKVLEAIIDRVPAPTAI 217


>AC006776-7|AAF60623.1|  361|Caenorhabditis elegans Serpentine
           receptor, class w protein100 protein.
          Length = 361

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 98  RMCGRHQNVRRVPIFNISLSP 36
           ++C ++QN   VP F+++LSP
Sbjct: 179 QVCAQYQNTNNVPKFSVALSP 199


>AC024803-1|AAL05589.4|  433|Caenorhabditis elegans Hypothetical
           protein Y51H7BM.1 protein.
          Length = 433

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 579 ICCTKSLGYPLHW 541
           +CC K LGYP +W
Sbjct: 52  LCCEKELGYPSNW 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,289,993
Number of Sequences: 27780
Number of extensions: 236721
Number of successful extensions: 593
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)