Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_A24
(393 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 30 0.11
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 29 0.19
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 29 0.26
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 28 0.45
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 27 1.4
SPAC29B12.10c |||OPT oligopeptide transporter family|Schizosacch... 26 1.8
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl... 26 2.4
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 25 4.2
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 25 5.5
SPAPB2B4.01c |gpi12||pig-L|Schizosaccharomyces pombe|chr 1|||Manual 25 5.5
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 24 7.3
SPBC27B12.11c |||transcription factor |Schizosaccharomyces pombe... 24 7.3
SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces po... 24 7.3
SPAC25B8.11 |||transcription factor|Schizosaccharomyces pombe|ch... 24 7.3
SPCC126.05c |mrpl17||mitochondrial ribosomal protein subunit L17... 24 9.7
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 24 9.7
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 24 9.7
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 24 9.7
SPCC794.12c |mae2||malic enzyme|Schizosaccharomyces pombe|chr 3|... 24 9.7
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 30.3 bits (65), Expect = 0.11
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 297 NFLRYSLLPTASTRERGRLEVRSALGTVHVICTVVDRFV 181
NF ++P STR+R + +R G +H+IC D +
Sbjct: 756 NFRVLDIIPFTSTRKRMSVIIRDEDGIIHLICKGADTVI 794
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 29.5 bits (63), Expect = 0.19
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 92 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 256
PT++ T T ++ T T + +TTT+ + T + T T P + T+ LP++
Sbjct: 102 PTVETTTTPMVETT-TITPMVETTTITPMVEAMITLMEETMTTPMEETTTILPMA 155
Score = 25.4 bits (53), Expect = 3.2
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 98 LKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 256
++ET T L A T+ + TTT T TV T T P + + LP++
Sbjct: 145 MEETTTILPMAAMTTPMEETTTTTPMVETTTIPTVE-TMTTPMVEAMTILPMA 196
Score = 24.2 bits (50), Expect = 7.3
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 95 TLKETATNLLTTARTSLILPK---TTTLMETATNLSTTVHITWTVPKADLTSSLPL 253
T E T + T+ ILP TT ++ET T TV T T P + T+ P+
Sbjct: 68 TPMEETTTITPMVETTTILPMAAMTTPMVETTT--IPTVETT-TTPMVETTTITPM 120
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 29.1 bits (62), Expect = 0.26
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 110 ATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSL 259
A+ L +++ T+ + P +T ET ++ S+ T T+ + TSS P+SL
Sbjct: 234 ASTLESSSLTNTVSPTESTFYETKSSTSSVP--TQTIDSSSFTSSTPVSL 281
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 28.3 bits (60), Expect = 0.45
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +1
Query: 157 DYNPNG-NGYEPIDNGAYYVDRPQG---RPYFKPTPFPG 261
DYN N N Y PI N Y+++ G PYF PG
Sbjct: 119 DYNNNRKNFYPPIQNSTYFINATGGIDSMPYFGLNNAPG 157
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 26.6 bits (56), Expect = 1.4
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +3
Query: 183 RTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNIL 290
R + ++C R P RP + PW + + K I+
Sbjct: 1280 RDFIEQCFERDPEQRPRAVDLLTHPWITDFRKKTII 1315
>SPAC29B12.10c |||OPT oligopeptide transporter
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 851
Score = 26.2 bits (55), Expect = 1.8
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +2
Query: 77 LCWLWPTLKETATNLLTTARTSL-ILPKTTTLMETATNLSTTVHITWTV 220
LCW+WP K N L + L ILP T + N + W +
Sbjct: 361 LCWIWP--KNRVVNQLFGYNSGLGILPLTFDWQQVVYNSNPLASPWWVI 407
>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
Plh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 623
Score = 25.8 bits (54), Expect = 2.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 154 KDYNPNGNGYEPIDNGAYYVDRPQGRP 234
K Y +G G +P + G YY + P+G+P
Sbjct: 479 KIYCVHGVG-KPTERGYYYTNNPEGQP 504
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 25.0 bits (52), Expect = 4.2
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -1
Query: 141 DVRAVVNRFVAVSLSVG-HSQQSEDENHEEF 52
+VR V NRFVAV L G DE ++F
Sbjct: 1056 NVRRVTNRFVAVKLDCGIDGNIKADEVSDDF 1086
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 24.6 bits (51), Expect = 5.5
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = -1
Query: 276 LPTASTR-ERGRLEVRSALG---TVHVICTVVDRFVAVSIRVVVFGRINDVRAVVNRFVA 109
L TA R E+ ++ V+ G + IC ++ + A+S + + VNR V+
Sbjct: 1027 LATAHNRHEKSKVSVQGLSGGEKSFATICMLLSIWEAMSCPLRCLDEFDVFMDAVNRLVS 1086
Query: 108 VSLSVGHSQQSEDE 67
+ + V ++ S D+
Sbjct: 1087 IKMMVDSAKDSSDK 1100
>SPAPB2B4.01c |gpi12||pig-L|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 24.6 bits (51), Expect = 5.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 77 LCWLWPTLKETATNLLTTARTS 142
+ W W TL TA +L+TA S
Sbjct: 1 MIWFWSTLLVTAIAVLSTANES 22
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 24.2 bits (50), Expect = 7.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 121 IDNRPYIVNPPKDYNPNGNGYEPIDNGAY 207
+++ PY+ N D+N NGN P+ +Y
Sbjct: 370 VNSMPYLSNG--DHNNNGNTSSPVSRFSY 396
>SPBC27B12.11c |||transcription factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 738
Score = 24.2 bits (50), Expect = 7.3
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 100 QGNGYEPIDNRPYIVNPPKDYNPNGNGY 183
QG G + D PY ++P Y P G Y
Sbjct: 186 QGAGVKA-DINPYNLSPYSQYGPEGTAY 212
>SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 547
Score = 24.2 bits (50), Expect = 7.3
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 73 LALLAMANAQGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAY 207
LAL ++ Q Y I+ P N P +N N N + I AY
Sbjct: 86 LALESLKGIQSKWYGYIEYLPKTFNTPLYFNENDNAF-LISTNAY 129
>SPAC25B8.11 |||transcription factor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 24.2 bits (50), Expect = 7.3
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 188 LSTTVHIT-WTVPKADLTSSLPLSLVLAVGSKEYLRKL 298
L+T +H + VPK + SLPL + + K +L+ +
Sbjct: 391 LATNIHEDDFVVPKIESDESLPLEITSSHSFKTFLKMI 428
>SPCC126.05c |mrpl17||mitochondrial ribosomal protein subunit
L17|Schizosaccharomyces pombe|chr 3|||Manual
Length = 268
Score = 23.8 bits (49), Expect = 9.7
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 183 RTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNIL 290
+T+ R L P L Y + WC+ E+KN L
Sbjct: 217 KTFLLRARLLNGLDVPNLQNVYDWVWCTYDELKNKL 252
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 23.8 bits (49), Expect = 9.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 255 ERGRLEVRSALGTVHVICTVVDRFVAVSIRVV 160
+RG LE+ AL T C++ F VS ++
Sbjct: 1158 KRGNLEIAKALMTDSTKCSIASFFNIVSANIL 1189
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 23.8 bits (49), Expect = 9.7
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 125 TTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 256
TTA ++ P T+ TAT+ S+T + A SS PL+
Sbjct: 349 TTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLT 392
Score = 23.8 bits (49), Expect = 9.7
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 125 TTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 256
TTA ++ P T+ TAT+ S+T + A SS PL+
Sbjct: 463 TTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLT 506
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 23.8 bits (49), Expect = 9.7
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = +1
Query: 94 NAQGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPT 249
N + N EP+ PPK+ N N + +P + V +P PT
Sbjct: 220 NEEVNNLEPVGQNESKQEPPKEENSNVSQEQP-EQAQPEVSAASEQPESNPT 270
>SPCC794.12c |mae2||malic enzyme|Schizosaccharomyces pombe|chr
3|||Manual
Length = 565
Score = 23.8 bits (49), Expect = 9.7
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -1
Query: 123 NRFVAVSLSVGHSQQSEDENHE 58
NRF+ + L VG + ++ +NH+
Sbjct: 190 NRFLPIVLDVGTNNETHRKNHQ 211
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,606,392
Number of Sequences: 5004
Number of extensions: 34221
Number of successful extensions: 113
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 130061696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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