Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_A21
         (439 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U95006-1|AAB53638.1|   63|Homo sapiens D9 splice variant A protein.    44   2e-04
BC009571-1|AAH09571.1|   63|Homo sapiens stimulated by retinoic ...    42   7e-04
U95007-1|AAB53639.1|   58|Homo sapiens D9 splice variant B protein.    30   3.0  
BC011610-1|AAH11610.1|   57|Homo sapiens STRA13 protein protein.       30   3.0  
AL353692-3|CAI16236.1| 5596|Homo sapiens MDN1, midasin homolog (...    29   7.0  
AL158813-2|CAI13203.1| 5596|Homo sapiens MDN1, midasin homolog (...    29   7.0  
AL096678-1|CAI42279.1| 5596|Homo sapiens MDN1, midasin homolog (...    29   7.0  
AF503925-1|AAM77722.1| 5596|Homo sapiens midasin protein.              29   7.0  

>U95006-1|AAB53638.1|   63|Homo sapiens D9 splice variant A protein.
          Length = 63

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 28/74 (37%), Positives = 38/74 (51%)
 Frame = +2

Query: 182 STIKKDVIKELLENHFQESKTKIAPHALMLLADVAKCLVTETCLRAVKQAQREGXNKVDV 361
           S  +K+++  LL  HF++ KTK                  E  +R V+QAQ E   +VDV
Sbjct: 8   SGFRKELVSRLLHLHFKDDKTK------------------EAAVRGVRQAQAEDALRVDV 49

Query: 362 XHXEKCLPQLMLDF 403
              EK LPQL+LDF
Sbjct: 50  DQLEKLLPQLLLDF 63


>BC009571-1|AAH09571.1|   63|Homo sapiens stimulated by retinoic
           acid 13 homolog (mouse) protein.
          Length = 63

 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 27/74 (36%), Positives = 37/74 (50%)
 Frame = +2

Query: 182 STIKKDVIKELLENHFQESKTKIAPHALMLLADVAKCLVTETCLRAVKQAQREGXNKVDV 361
           S  +K+++  LL  HF++ KTK                  E  +R V+QAQ E   + DV
Sbjct: 8   SGFRKELVSRLLHLHFKDDKTK------------------EAAVRGVRQAQAEDALRADV 49

Query: 362 XHXEKCLPQLMLDF 403
              EK LPQL+LDF
Sbjct: 50  DQLEKVLPQLLLDF 63


>U95007-1|AAB53639.1|   58|Homo sapiens D9 splice variant B protein.
          Length = 58

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 22/67 (32%), Positives = 31/67 (46%)
 Frame = +2

Query: 182 STIKKDVIKELLENHFQESKTKIAPHALMLLADVAKCLVTETCLRAVKQAQREGXNKVDV 361
           S  +K+++  LL  HF++ KTK                  E  +R V+QAQ E   +VDV
Sbjct: 8   SGFRKELVSRLLHLHFKDDKTK------------------EAAVRGVRQAQAEDALRVDV 49

Query: 362 XHXEKCL 382
              EK L
Sbjct: 50  DQLEKLL 56


>BC011610-1|AAH11610.1|   57|Homo sapiens STRA13 protein protein.
          Length = 57

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 22/67 (32%), Positives = 31/67 (46%)
 Frame = +2

Query: 182 STIKKDVIKELLENHFQESKTKIAPHALMLLADVAKCLVTETCLRAVKQAQREGXNKVDV 361
           S  +K+++  LL  HF++ KTK                  E  +R V+QAQ E   +VDV
Sbjct: 7   SGFRKELVSRLLHLHFKDDKTK------------------EAAVRGVRQAQAEDALRVDV 48

Query: 362 XHXEKCL 382
              EK L
Sbjct: 49  DQLEKLL 55


>AL353692-3|CAI16236.1| 5596|Homo sapiens MDN1, midasin homolog
            (yeast) protein.
          Length = 5596

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 164  LLSNVKSTIKKDVIKELLENHFQESKTKIAPHALMLLADVAKCL 295
            L   V+   + DVI+E+LE HF   K K+ P +L    +V K L
Sbjct: 1306 LAGRVRKQEEIDVIQEVLEKHF---KKKLCPQSLFSKENVLKLL 1346


>AL158813-2|CAI13203.1| 5596|Homo sapiens MDN1, midasin homolog
            (yeast) protein.
          Length = 5596

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 164  LLSNVKSTIKKDVIKELLENHFQESKTKIAPHALMLLADVAKCL 295
            L   V+   + DVI+E+LE HF   K K+ P +L    +V K L
Sbjct: 1306 LAGRVRKQEEIDVIQEVLEKHF---KKKLCPQSLFSKENVLKLL 1346


>AL096678-1|CAI42279.1| 5596|Homo sapiens MDN1, midasin homolog
            (yeast) protein.
          Length = 5596

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 164  LLSNVKSTIKKDVIKELLENHFQESKTKIAPHALMLLADVAKCL 295
            L   V+   + DVI+E+LE HF   K K+ P +L    +V K L
Sbjct: 1306 LAGRVRKQEEIDVIQEVLEKHF---KKKLCPQSLFSKENVLKLL 1346


>AF503925-1|AAM77722.1| 5596|Homo sapiens midasin protein.
          Length = 5596

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 164  LLSNVKSTIKKDVIKELLENHFQESKTKIAPHALMLLADVAKCL 295
            L   V+   + DVI+E+LE HF   K K+ P +L    +V K L
Sbjct: 1306 LAGRVRKQEEIDVIQEVLEKHF---KKKLCPQSLFSKENVLKLL 1346


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,672,565
Number of Sequences: 237096
Number of extensions: 1007145
Number of successful extensions: 2327
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2327
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)