Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_A17
         (620 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968...    32   0.42 
08_02_0856 - 21928499-21929626,21929728-21929788,21929950-21930899     30   1.7  
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072...    29   2.3  
08_02_1383 + 26594304-26594386,26595927-26595972,26596108-265962...    29   3.9  
03_05_0222 + 22082863-22082938,22083261-22083333,22083451-220834...    28   5.2  
02_01_0443 + 3204142-3204674,3205446-3206178                           28   5.2  
05_05_0033 + 21737075-21737721,21737819-21738134,21738463-21739722     28   6.9  

>10_08_0043 - 14390398-14391531,14391850-14393691,14393800-14396825,
            14397510-14397609
          Length = 2033

 Score = 31.9 bits (69), Expect = 0.42
 Identities = 25/79 (31%), Positives = 39/79 (49%)
 Frame = +2

Query: 341  THEDSHVVMSEKVQSLAGSIYQEFERMIARYDEDVVKTXMPLLVNVLECLDSAYQTNQEH 520
            T ++++V M E  + L   + Q  ER      E+V+K  + +L   L C   +YQT+Q  
Sbjct: 1291 TLQNNNVQMLEWNEQLKQELQQGCER------EEVLKAEILVLQEKLSCSRESYQTSQNE 1344

Query: 521  EVELELXREDNEQLVTQYE 577
             V L    E NE L  +Y+
Sbjct: 1345 IVSL---TEKNETLCKEYQ 1360


>08_02_0856 - 21928499-21929626,21929728-21929788,21929950-21930899
          Length = 712

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +2

Query: 290 FDDSASSGYVTNETIYGTHEDSHVVMSEK---VQSLAGSIYQEFERMIARYDEDVVKTXM 460
           FD   S  Y    TI+ T+ED H+  S K   V + AG IY     +I  + E++V+  M
Sbjct: 421 FDPLRSENYNIQVTIFDTNEDRHIFRSSKDGWVLASAG-IYGNDIFIINPFTEEIVEPPM 479


>10_08_0425 - 17806117-17806401,17806862-17806984,17807076-17807222,
            17807307-17807450,17808557-17808668,17808762-17808898,
            17809016-17809156,17810921-17811004,17811275-17811742,
            17811858-17811936,17812494-17812506,17813884-17814460,
            17814502-17814774,17814899-17815045,17815354-17815413,
            17816124-17816510
          Length = 1058

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 21/81 (25%), Positives = 37/81 (45%)
 Frame = +2

Query: 365  MSEKVQSLAGSIYQEFERMIARYDEDVVKTXMPLLVNVLECLDSAYQTNQEHEVELELXR 544
            + EKVQS+  ++  EF+ M+ R  +D+  T     V      D+ Y+  +  E E+    
Sbjct: 793  IEEKVQSVRNAVIAEFKSML-RESKDITSTSRWTKVKENFRSDARYKAMKHEEREVAFNE 851

Query: 545  EDNEQLVTQYERQKAARXYAD 607
               E    + E ++AA+   D
Sbjct: 852  YIAELKSAEKEAEQAAKAKLD 872


>08_02_1383 +
           26594304-26594386,26595927-26595972,26596108-26596222,
           26596645-26596712,26596814-26597440,26597527-26597631,
           26597715-26598062
          Length = 463

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
 Frame = +2

Query: 326 ETIYGTHEDSHVVMSEKVQSLAGSIYQEFERMIARY-DEDVVKTXMPLLVNVLECLDSAY 502
           +T+    +  +VV    V +  GS  + ++    R+ D   V+     L  ++ CL++A 
Sbjct: 284 DTLCALTDLHYVVFHGTVDAEGGSAKEAYQEYYVRHVDGHPVRCDAERL-RLVRCLEAAV 342

Query: 503 QTNQEHEVELELXREDNEQLVTQYER 580
           +      +ELE+  ED   L+++  R
Sbjct: 343 ERRASDGLELEVKTEDRAGLLSEITR 368


>03_05_0222 +
           22082863-22082938,22083261-22083333,22083451-22083496,
           22083639-22083753,22083847-22083926,22084022-22084621,
           22084718-22084822,22084916-22085248
          Length = 475

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 19/75 (25%), Positives = 34/75 (45%)
 Frame = +2

Query: 356 HVVMSEKVQSLAGSIYQEFERMIARYDEDVVKTXMPLLVNVLECLDSAYQTNQEHEVELE 535
           +VV    + +     YQEF   +   +   + T    L  V++CL++A +      V+LE
Sbjct: 314 YVVFHANIDAKDNQAYQEF--YVRHVNGSPMHTEADRL-RVIQCLEAAIERRVSEGVKLE 370

Query: 536 LXREDNEQLVTQYER 580
           L   D   L+++  R
Sbjct: 371 LCTNDKVGLLSEVTR 385


>02_01_0443 + 3204142-3204674,3205446-3206178
          Length = 421

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -1

Query: 527 PPRALDSSDRLN---PSTLIHSLEVASMFLLHPHRIALSYVRTLGRYFQQEIVP 375
           P  A+D   R+     S + HSLE  +++ LHP+   L  + T  +   + +VP
Sbjct: 143 PSEAVDLDRRMAVPVSSVIGHSLEGLTLWTLHPNTSVLDCMETFSKGVHRALVP 196


>05_05_0033 + 21737075-21737721,21737819-21738134,21738463-21739722
          Length = 740

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +2

Query: 491 DSAYQTNQEHEVELELXREDNEQLVTQYERQKAARXYADRSY 616
           D+ Y    E + E+E   E   +L+ QYE ++ A+   +R +
Sbjct: 272 DNPYTVEYEKDGEMERVLEKQAELIEQYEEEEYAQREWERKF 313


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,769,088
Number of Sequences: 37544
Number of extensions: 240183
Number of successful extensions: 538
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 538
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)