Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_A16
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22176-1|CAA80142.1|  724|Caenorhabditis elegans Hypothetical pr...    53   2e-07
U58758-4|AAK68614.1|  914|Caenorhabditis elegans Hypothetical pr...    44   7e-05
U58758-3|AAK68615.1|  905|Caenorhabditis elegans Hypothetical pr...    44   7e-05
U58758-6|AAO38577.1|  604|Caenorhabditis elegans Hypothetical pr...    44   1e-04
U58758-5|AAL11107.1|  693|Caenorhabditis elegans Hypothetical pr...    44   1e-04
AL034392-2|CAA22305.1|  120|Caenorhabditis elegans Hypothetical ...    32   0.31 
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl...    32   0.41 
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl...    32   0.41 
U58758-7|AAO38576.1|  220|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z46241-4|CAA86318.1|  837|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z73969-9|CAE17694.1|  244|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z46793-4|CAA86773.1|  889|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z34800-5|CAA84325.1|  889|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AC084161-4|AAK29730.3|  724|Caenorhabditis elegans Hypothetical ...    27   8.7  

>Z22176-1|CAA80142.1|  724|Caenorhabditis elegans Hypothetical
           protein ZK1098.1 protein.
          Length = 724

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
 Frame = +3

Query: 438 PNQSSPWSEHKAPDGRTYXYNSVTKQSLWGKPDXXKTSAXKLLSA----CVWKEYXTNXG 605
           P+  S WS H    G  Y +N VTKQ+ W KPD  KT   +  S       WKE+ ++ G
Sbjct: 78  PSVESDWSVHTNEKGTPYYHNRVTKQTSWIKPDVLKTPLERSTSGQPQQGQWKEFMSDDG 137

Query: 606 RLYYHN 623
           + YY+N
Sbjct: 138 KPYYYN 143



 Score = 39.5 bits (88), Expect = 0.002
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +3

Query: 444 QSSPWSEHKAPDGRTYXYNSVTKQSLWGKPD 536
           Q   W E  + DG+ Y YN++TK++ W KPD
Sbjct: 125 QQGQWKEFMSDDGKPYYYNTLTKKTQWVKPD 155


>U58758-4|AAK68614.1|  914|Caenorhabditis elegans Hypothetical
           protein ZK1127.9a protein.
          Length = 914

 Score = 44.4 bits (100), Expect = 7e-05
 Identities = 18/46 (39%), Positives = 28/46 (60%)
 Frame = +3

Query: 396 NRN*MLLHQMLLHRPNQSSPWSEHKAPDGRTYXYNSVTKQSLWGKP 533
           NR   + H  +   P+ +  W+E  APDGR Y +NS+T+++ W KP
Sbjct: 217 NREERMPHGQIPQNPDDA--WNEFNAPDGRKYYFNSITQENTWEKP 260



 Score = 29.9 bits (64), Expect(2) = 0.24
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 456 WSEHKAPDGRTYXYNSVTKQSLWGKPDXXK 545
           W E +  +G+ Y Y+ V + ++W +P   K
Sbjct: 168 WVETETAEGKKYFYHPVNRNTIWERPQNAK 197



 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 438 PNQSSPWSEHKAPDGRTYXYNSVTKQSLWGKP 533
           P   +PW      D + + YN  TK S+W +P
Sbjct: 344 PVSGTPWCVVWTGDDKVFFYNPSTKCSVWERP 375



 Score = 21.4 bits (43), Expect(2) = 0.24
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 579 WKEYXTNXGRLYYHN 623
           W E+    GR YY N
Sbjct: 235 WNEFNAPDGRKYYFN 249


>U58758-3|AAK68615.1|  905|Caenorhabditis elegans Hypothetical
           protein ZK1127.9b protein.
          Length = 905

 Score = 44.4 bits (100), Expect = 7e-05
 Identities = 18/46 (39%), Positives = 28/46 (60%)
 Frame = +3

Query: 396 NRN*MLLHQMLLHRPNQSSPWSEHKAPDGRTYXYNSVTKQSLWGKP 533
           NR   + H  +   P+ +  W+E  APDGR Y +NS+T+++ W KP
Sbjct: 208 NREERMPHGQIPQNPDDA--WNEFNAPDGRKYYFNSITQENTWEKP 251



 Score = 29.9 bits (64), Expect(2) = 0.24
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 456 WSEHKAPDGRTYXYNSVTKQSLWGKPDXXK 545
           W E +  +G+ Y Y+ V + ++W +P   K
Sbjct: 159 WVETETAEGKKYFYHPVNRNTIWERPQNAK 188



 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 438 PNQSSPWSEHKAPDGRTYXYNSVTKQSLWGKP 533
           P   +PW      D + + YN  TK S+W +P
Sbjct: 335 PVSGTPWCVVWTGDDKVFFYNPSTKCSVWERP 366



 Score = 21.4 bits (43), Expect(2) = 0.24
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 579 WKEYXTNXGRLYYHN 623
           W E+    GR YY N
Sbjct: 226 WNEFNAPDGRKYYFN 240


>U58758-6|AAO38577.1|  604|Caenorhabditis elegans Hypothetical
           protein ZK1127.9e protein.
          Length = 604

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +3

Query: 441 NQSSPWSEHKAPDGRTYXYNSVTKQSLWGKP 533
           N    W+E  APDGR Y +NS+T+++ W KP
Sbjct: 9   NPDDAWNEFNAPDGRKYYFNSITQENTWEKP 39



 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 438 PNQSSPWSEHKAPDGRTYXYNSVTKQSLWGKP 533
           P   +PW      D + + YN  TK S+W +P
Sbjct: 123 PVSGTPWCVVWTGDDKVFFYNPSTKCSVWERP 154


>U58758-5|AAL11107.1|  693|Caenorhabditis elegans Hypothetical
           protein ZK1127.9c protein.
          Length = 693

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +3

Query: 441 NQSSPWSEHKAPDGRTYXYNSVTKQSLWGKP 533
           N    W+E  APDGR Y +NS+T+++ W KP
Sbjct: 9   NPDDAWNEFNAPDGRKYYFNSITQENTWEKP 39



 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 438 PNQSSPWSEHKAPDGRTYXYNSVTKQSLWGKP 533
           P   +PW      D + + YN  TK S+W +P
Sbjct: 123 PVSGTPWCVVWTGDDKVFFYNPSTKCSVWERP 154


>AL034392-2|CAA22305.1|  120|Caenorhabditis elegans Hypothetical
           protein Y40B1A.2 protein.
          Length = 120

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 438 PNQSSPWSEHKAPDGRTYXYNSVTKQSLWGKP 533
           P   + W+E  +  G+ Y YN  T+ S W KP
Sbjct: 5   PRTFAGWTEQMSSSGKMYYYNKKTEISQWDKP 36


>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
            methyltransferase-likeprotein 1, isoform b protein.
          Length = 1590

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 456  WSEHKAPDGRTYXYNSVTKQSLWGKP 533
            W+  K+  G TY YN +TK++ W  P
Sbjct: 1352 WAIAKSEAGETYYYNKITKETQWTAP 1377


>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
            methyltransferase-likeprotein 1, isoform a protein.
          Length = 1604

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 456  WSEHKAPDGRTYXYNSVTKQSLWGKP 533
            W+  K+  G TY YN +TK++ W  P
Sbjct: 1366 WAIAKSEAGETYYYNKITKETQWTAP 1391


>U58758-7|AAO38576.1|  220|Caenorhabditis elegans Hypothetical
           protein ZK1127.9d protein.
          Length = 220

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 456 WSEHKAPDGRTYXYNSVTKQSLWGKPDXXK 545
           W E +  +G+ Y Y+ V + ++W +P   K
Sbjct: 159 WVETETAEGKKYFYHPVNRNTIWERPQNAK 188


>Z46241-4|CAA86318.1|  837|Caenorhabditis elegans Hypothetical
           protein C38D4.5 protein.
          Length = 837

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 456 WSEHKAPDGRTYXYNSVTKQSLWGKPDXXKTSA 554
           W E++   GRT+ +N  T +S W  P   +T A
Sbjct: 102 WFEYETDVGRTFFFNKETGKSQWIPPRFIRTPA 134


>Z73969-9|CAE17694.1|  244|Caenorhabditis elegans Hypothetical
           protein C12D8.13 protein.
          Length = 244

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -1

Query: 521 QALFGYRIIVICSSIRGLMFRPWTTLIWPMEQHLVQEHLIPV 396
           Q+  G R I I S I  L F PW +    +  H  +  L P+
Sbjct: 76  QSKIGSRAIWILSFIYALWFHPWNSYNQMVYHHTFEGSLFPI 117


>Z46793-4|CAA86773.1|  889|Caenorhabditis elegans Hypothetical
           protein F45H7.6 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 450 SPWSEHKAPDGRTYXYNSVTKQSLWGKPD 536
           S W  +     R +  N VTK++ W KPD
Sbjct: 233 SHWKTYLDAKKRKFYVNHVTKETRWTKPD 261


>Z34800-5|CAA84325.1|  889|Caenorhabditis elegans Hypothetical
           protein F45H7.6 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 450 SPWSEHKAPDGRTYXYNSVTKQSLWGKPD 536
           S W  +     R +  N VTK++ W KPD
Sbjct: 233 SHWKTYLDAKKRKFYVNHVTKETRWTKPD 261


>AC084161-4|AAK29730.3|  724|Caenorhabditis elegans Hypothetical
           protein Y92H12A.2 protein.
          Length = 724

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +3

Query: 456 WSEHKAPDGRTYXYNSVTKQSLWGKPDXXKTSAXKLL 566
           W    AP+GRT+  +  TK + W  P     +   LL
Sbjct: 276 WDMQVAPNGRTFFIDHRTKTTTWTDPRPGAATRVPLL 312


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,029,155
Number of Sequences: 27780
Number of extensions: 251033
Number of successful extensions: 605
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)