Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_A11
(633 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0095 + 13559997-13560232,13561295-13561683,13562092-135623... 30 1.3
04_04_0859 + 28805836-28805842,28806405-28806492,28807474-288075... 30 1.3
08_02_0977 + 23227081-23228004,23228244-23228315,23229788-232298... 29 4.1
03_03_0210 + 15470680-15470715,15473088-15473342,15473417-154734... 29 4.1
03_01_0166 + 1362254-1363138,1363225-1363545 28 5.4
01_01_1082 - 8516525-8517409 28 5.4
05_05_0204 + 23241555-23241696,23241770-23242910,23243058-23243583 28 7.1
03_06_0438 - 33917678-33918084,33929568-33930402,33931055-339313... 28 7.1
01_02_0116 - 11252220-11253313,11253398-11253559,11253977-112543... 28 7.1
12_02_1091 - 26001129-26001181,26001292-26001325,26001339-260014... 27 9.4
07_01_0716 + 5472618-5472818,5472943-5472985,5473672-5473761,547... 27 9.4
06_03_0271 - 19041491-19042069 27 9.4
05_04_0117 + 18136189-18137073,18137160-18137516 27 9.4
04_03_0141 + 11767781-11767880,11767953-11769262 27 9.4
02_05_1059 + 33815979-33816235,33816467-33816732,33817149-338171... 27 9.4
>12_02_0095 +
13559997-13560232,13561295-13561683,13562092-13562387,
13562475-13563361,13563440-13563562,13563693-13563981,
13564211-13564249
Length = 752
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = -2
Query: 431 LNFFSKTLALWIAAVISTSFSSCGYKGVHV---LFNWDFLHLTI 309
+N+ T A WI VI+ +S+C Y + ++W +HL I
Sbjct: 637 VNYIYDTFAHWILLVITPKWSTCHYLNSRIDKNAYDWTPIHLAI 680
>04_04_0859 + 28805836-28805842,28806405-28806492,28807474-28807558,
28807638-28807763,28807819-28807968,28808497-28808541,
28808612-28808875,28809843-28809887,28810395-28810430,
28812048-28812816,28813063-28813925,28814024-28814182,
28814440-28814558,28815356-28815417,28816677-28816805,
28817395-28817460,28817757-28817890,28818025-28818162,
28818630-28818889,28818996-28819107,28819590-28819675,
28820655-28820735,28822841-28822928,28823222-28823260,
28823847-28823964,28824063-28824130,28824884-28824981,
28825238-28825397,28825691-28825816,28825876-28825945,
28826046-28826449
Length = 1664
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -1
Query: 522 VCSRKDFPIYLLNLVL-ILQSRVSQVQCFSFFELLLENACSVDSRCYQHFFF*LWLQGCS 346
V + P L L+ L+ + +VQC EL+L+ C + +RCY + L GC
Sbjct: 967 VIKERVIPSILATLLKGFLEFKNVKVQCQEDNELVLKVVCKIHNRCYWKEYPSTALTGCG 1026
Query: 345 R 343
R
Sbjct: 1027 R 1027
>08_02_0977 +
23227081-23228004,23228244-23228315,23229788-23229841,
23231763-23231840,23233080-23233173,23233352-23233423,
23233537-23233584,23233608-23233777,23234016-23234088,
23234850-23235199
Length = 644
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 276 VKTSGINHMATDCEMQEVPIEKNVNTLVTTARKRSADNSGYPQSKR 413
V G+++ AT C + EK + TL+ + A N+ Y Q KR
Sbjct: 355 VGRDGVHYSATKCTKYTISTEKVMITLIHGKQVLEAVNNPYGQKKR 400
>03_03_0210 +
15470680-15470715,15473088-15473342,15473417-15473499,
15473617-15473698,15474886-15474939
Length = 169
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +3
Query: 321 QEVPIEKNVNTLVTTARKRSADNSGYPQSKRFREEVQRKKNIGPETHETAKLKPSSE 491
QE P+EK V A S N PQ+ +E + PET E ++ SE
Sbjct: 19 QEAPVEKAVEDKPQEAESISVTNDETPQA----DETATAVEVNPETSEVQEVADKSE 71
>03_01_0166 + 1362254-1363138,1363225-1363545
Length = 401
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 195 PICGDANQPGQCHNVHISTNFYYGFHEVKTSGINH 299
P CG+A H V + ++F+YG + TS H
Sbjct: 41 PACGEAFPSPDTHEVVVFSHFFYGGFALPTSKFFH 75
>01_01_1082 - 8516525-8517409
Length = 294
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 195 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 287
P CG+A H V + ++F+YG + TS
Sbjct: 40 PACGEAFPTSDMHEVVVFSHFFYGGFSLPTS 70
>05_05_0204 + 23241555-23241696,23241770-23242910,23243058-23243583
Length = 602
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 410 LALWIAAVISTSFSSCGYKGVHVLF 336
L LW+ AV+ SF GY GV LF
Sbjct: 111 LPLWLVAVVGASFGLVGY-GVQFLF 134
>03_06_0438 -
33917678-33918084,33929568-33930402,33931055-33931335,
33931358-33931451,33931549-33931857
Length = 641
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 312 CEMQEVPIEKNVNTLVTTARKRSADNSGYP-QSKRFREEVQRKKNIGPETHETAKLKPSS 488
C++Q+ P + T R+ NS P Q R+ V R G + + +L+P+S
Sbjct: 278 CDVQDAPSQGQELTRHQWVH-RNLPNSTVPWQELTGRQWVARNLANGNKCYLNFRLRPAS 336
Query: 489 EDILESLFWNIHG 527
D+L N HG
Sbjct: 337 FDLLHKTLVNNHG 349
>01_02_0116 -
11252220-11253313,11253398-11253559,11253977-11254306,
11254328-11254377,11255195-11255389,11255532-11255625,
11255713-11255961,11256831-11256892,11257434-11257534,
11257766-11257880,11258384-11258475,11259197-11259333,
11259721-11259760
Length = 906
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 296 VDTRRFYFMKSIVKICGYVYIVALTWLVGV 207
+DT F+ + I G +Y + TW+VG+
Sbjct: 65 LDTMMGVFVPCLQNILGIIYYIRFTWIVGM 94
>12_02_1091 -
26001129-26001181,26001292-26001325,26001339-26001437,
26002327-26002369,26002389-26002494,26002776-26002818,
26003526-26003579,26003831-26003911,26003997-26004119,
26004197-26004846,26004928-26005554,26005633-26005870,
26006082-26006258,26006373-26006723,26006824-26007111,
26008340-26008462,26008551-26009007,26009115-26009263,
26009466-26009489
Length = 1239
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 453 QVQCFSFFELLLENACSVDSR 391
Q Q S F + ENACS+DS+
Sbjct: 72 QTQSASMFAAMQENACSIDSK 92
>07_01_0716 +
5472618-5472818,5472943-5472985,5473672-5473761,
5473863-5473938,5474435-5474504,5474911-5475075,
5475261-5475404,5475547-5475651,5475876-5476022,
5476463-5476531,5476882-5476989,5477392-5477483,
5477559-5477598,5478129-5478221,5478386-5478958,
5479596-5479610
Length = 676
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 407 QAFSRRSSKKEKHWT*DTRDCKIKTKFRRYIGKSFLE 517
Q F R ++ H++ T+DCKI Y+ +FLE
Sbjct: 97 QEFHRHIYNRDWHFSCGTKDCKILMDKFHYVLTAFLE 133
>06_03_0271 - 19041491-19042069
Length = 192
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 195 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 287
P CG+A H V + ++F+YG + TS
Sbjct: 17 PACGEAFPTPDTHEVVVFSHFFYGGFSLPTS 47
>05_04_0117 + 18136189-18137073,18137160-18137516
Length = 413
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 195 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 287
P CG+A H V + ++F+YG + TS
Sbjct: 41 PACGEAFPSPDTHEVAVFSHFFYGGFALPTS 71
>04_03_0141 + 11767781-11767880,11767953-11769262
Length = 469
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 6/30 (20%)
Frame = +2
Query: 455 DTRDCKIKTKFRR------YIGKSFLEHTW 526
DTRD + T F++ Y GK+F EH W
Sbjct: 90 DTRDPRFHTAFQKSVYEQVYAGKAFAEHKW 119
>02_05_1059 +
33815979-33816235,33816467-33816732,33817149-33817192,
33817363-33817539,33817638-33817964,33818067-33818192,
33818518-33818622,33818815-33820125,33820221-33820382,
33820416-33820517,33820549-33821272,33821358-33821451,
33821824-33821986
Length = 1285
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +3
Query: 333 IEKNVNTLVTTARKRSADNSGYPQSKRFREEVQRKKNIGP--ETHETAKLKPSSEDILES 506
IEK + L ++ S N + K+ + Q N+ P E + K S +L
Sbjct: 314 IEKAPSVLTIHLKRFSPFNPRHKIDKKV--QFQPTLNLKPYVSNPEGMEFKYSLYGVLVH 371
Query: 507 LFWNIHGGHFYSYLNCASSL 566
WN GH+Y ++ +S +
Sbjct: 372 AGWNTQSGHYYCFVRTSSGI 391
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,334,628
Number of Sequences: 37544
Number of extensions: 334733
Number of successful extensions: 881
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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