Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_A10
         (419 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0061 + 527417-527856,527957-528017,528113-528685                 27   4.6  
12_02_0844 - 23609783-23609926,23610014-23610331,23610771-236109...    27   8.1  

>06_01_0061 + 527417-527856,527957-528017,528113-528685
          Length = 357

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 181 WKPLFADFFKEQNKLAESTSENRV 252
           WKP+  D +KE+ K   S   N++
Sbjct: 180 WKPMIEDMYKEETKPESSDGNNKL 203


>12_02_0844 -
           23609783-23609926,23610014-23610331,23610771-23610926,
           23611068-23611318,23611384-23611530,23612450-23612501,
           23612628-23612763,23613507-23613538
          Length = 411

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 396 LIPLSFYVRSVKHSINNDDTRSNCYSH 316
           L+P   YV   K +I N D R+NCY +
Sbjct: 98  LVPNDHYVE--KQNITNADWRTNCYEY 122


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,152,915
Number of Sequences: 37544
Number of extensions: 120309
Number of successful extensions: 209
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)