Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_A05
(412 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 119 2e-28
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 114 4e-27
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 108 4e-25
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 88 4e-19
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 64 8e-12
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 38 6e-04
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 29 0.37
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 27 1.1
SPBP8B7.27 |mug30||ubiquitin-protein ligase E3|Schizosaccharomyc... 27 1.5
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 27 1.5
SPAC3H8.08c |||transcription factor|Schizosaccharomyces pombe|ch... 25 3.5
SPAC1F7.08 |fio1||iron transport multicopper oxidase Fio1|Schizo... 25 4.6
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 25 4.6
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr... 25 6.1
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 119 bits (286), Expect = 2e-28
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = +1
Query: 211 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGX 390
YVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGRKF+D VQ+DMKHWPF+V+S G
Sbjct: 39 YVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGK 98
Query: 391 PKIKVAY 411
P ++V Y
Sbjct: 99 PVLQVEY 105
Score = 28.7 bits (61), Expect = 0.37
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 141 VGVFQHGKVEIIANDQGQQ 197
VG F + +VEIIANDQG +
Sbjct: 16 VGHFSNNRVEIIANDQGNR 34
Score = 28.3 bits (60), Expect = 0.49
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +2
Query: 104 AVGIDLGTTYSC 139
++GIDLGTTYSC
Sbjct: 4 SIGIDLGTTYSC 15
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 114 bits (275), Expect = 4e-27
Identities = 51/67 (76%), Positives = 58/67 (86%)
Frame = +1
Query: 211 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGX 390
YVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGR+F D VQ+DMKHWPF+V+ G
Sbjct: 39 YVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGK 98
Query: 391 PKIKVAY 411
P I+V +
Sbjct: 99 PLIQVEF 105
Score = 28.7 bits (61), Expect = 0.37
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 141 VGVFQHGKVEIIANDQGQQ 197
VG F + +VEIIANDQG +
Sbjct: 16 VGHFSNNRVEIIANDQGNR 34
Score = 28.3 bits (60), Expect = 0.49
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +2
Query: 104 AVGIDLGTTYSC 139
++GIDLGTTYSC
Sbjct: 4 SIGIDLGTTYSC 15
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 108 bits (259), Expect = 4e-25
Identities = 45/67 (67%), Positives = 56/67 (83%)
Frame = +1
Query: 211 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGX 390
+VAFT+TERL+GDAAKNQ AMNP NT+FDAKRLIGR++ED Q D+KHWPF+V+ + G
Sbjct: 43 FVAFTETERLVGDAAKNQAAMNPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGI 102
Query: 391 PKIKVAY 411
P I+V Y
Sbjct: 103 PTIEVNY 109
Score = 29.5 bits (63), Expect = 0.21
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2
Query: 104 AVGIDLGTTYSC 139
A+GIDLGTTYSC
Sbjct: 8 AIGIDLGTTYSC 19
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 88.2 bits (209), Expect = 4e-19
Identities = 38/65 (58%), Positives = 50/65 (76%)
Frame = +1
Query: 211 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGX 390
YVAFT+ ERL+G+AAKNQ NP NTIFD KRLIGRKF++ T+ D+K +PF +V+D
Sbjct: 72 YVAFTEDERLVGEAAKNQAPSNPENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNR 131
Query: 391 PKIKV 405
P ++V
Sbjct: 132 PLVEV 136
Score = 29.5 bits (63), Expect = 0.21
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 141 VGVFQHGKVEIIANDQGQQ 197
V V ++G+VEIIANDQG +
Sbjct: 49 VAVMKNGRVEIIANDQGNR 67
Score = 27.9 bits (59), Expect = 0.65
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2
Query: 107 VGIDLGTTYSC 139
+GIDLGTTYSC
Sbjct: 38 IGIDLGTTYSC 48
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 64.1 bits (149), Expect = 8e-12
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +1
Query: 214 VAFT-DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 375
VAFT D ERL+G +AK Q +NP NT F KRLIGR+F++ VQ D+K P+++V
Sbjct: 88 VAFTKDGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIV 142
Score = 29.1 bits (62), Expect = 0.28
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 95 KAPAVGIDLGTTYSC 139
K P +GIDLGTT SC
Sbjct: 49 KGPVIGIDLGTTTSC 63
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 37.9 bits (84), Expect = 6e-04
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +1
Query: 214 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQ 342
V++ + R +G+AAK+ A N NT+ KRL GR ++D ++
Sbjct: 43 VSYGERSRFLGEAAKSAEASNFRNTVGSLKRLAGRTYDDPEIK 85
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 28.7 bits (61), Expect = 0.37
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +1
Query: 214 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD 381
+ F+D E GD A + P + AK L+G+ + + D P++V+ D
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYD 180
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 27.1 bits (57), Expect = 1.1
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 96 KHPQ*ESIWVPRTLAVGVF-QHGKVEII 176
KHPQ + +WVP A+ + ++G EI+
Sbjct: 131 KHPQIDGVWVPYDRAISIAKRYGVYEIL 158
>SPBP8B7.27 |mug30||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 807
Score = 26.6 bits (56), Expect = 1.5
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -1
Query: 106 CGCFCHFVFLISL-VTCSLKQLSKRARL 26
C CFC + FL+S+ S+ QL R ++
Sbjct: 384 CFCFCQYPFLLSMGAKISILQLDARRKM 411
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 26.6 bits (56), Expect = 1.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 132 TLAVGVFQHGKVEIIANDQGQQDHSVLCCVHRHRASHR 245
T A G +H KV + DQG +D C + ++SH+
Sbjct: 1256 TKAKGDIEH-KVYQLLKDQGCEDFGTKCVIEEVKSSHK 1292
>SPAC3H8.08c |||transcription factor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 563
Score = 25.4 bits (53), Expect = 3.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 110 LLRVLLPFCIFNQSCYLFXKTTQQTCAI 27
L +L PFCI + LF KT C I
Sbjct: 132 LANLLPPFCISQKIVNLFFKTLNVVCPI 159
>SPAC1F7.08 |fio1||iron transport multicopper oxidase
Fio1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 622
Score = 25.0 bits (52), Expect = 4.6
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 208 TEWSCXPWSLAMISTFPCWKTPT 140
T+W P+++ + F WK PT
Sbjct: 164 TDWYYTPFNILVPDEFKTWKNPT 186
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 25.0 bits (52), Expect = 4.6
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +1
Query: 214 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRK-FEDATVQADMKHWP 363
VAF ER+ G A N P ++I + K L+ E VQ +P
Sbjct: 61 VAFKGNERIFGVDASNLATRFPAHSIRNVKELLDTAGLESVLVQKYQSSYP 111
>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 455
Score = 24.6 bits (51), Expect = 6.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 387 ASITDNLERPVLHVGLHSS 331
A + NL RP+ H LHSS
Sbjct: 408 APVIRNLPRPIYHQDLHSS 426
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,539,753
Number of Sequences: 5004
Number of extensions: 27330
Number of successful extensions: 94
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 94
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 142254980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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