SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_A05
         (412 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80223-1|CAB02319.1|  640|Caenorhabditis elegans Hypothetical pr...   119   7e-28
M18540-1|AAA28078.1|  640|Caenorhabditis elegans protein ( C.ele...   119   7e-28
Z83108-5|CAB05508.1|  645|Caenorhabditis elegans Hypothetical pr...   103   7e-23
Z83108-4|CAB05507.1|  645|Caenorhabditis elegans Hypothetical pr...   103   7e-23
Z81467-1|CAB03871.1|  643|Caenorhabditis elegans Hypothetical pr...   103   7e-23
U56965-1|AAB52671.1|  661|Caenorhabditis elegans Heat shock prot...    94   4e-20
M26604-1|AAA28074.1|  661|Caenorhabditis elegans protein ( C. el...    94   4e-20
AF000264-1|AAC71123.1|  657|Caenorhabditis elegans Heat shock pr...    91   4e-19
X07678-1|CAA30525.1|  487|Caenorhabditis elegans hsp6F protein.        61   4e-10
U88315-3|AAB42371.1|  657|Caenorhabditis elegans Heat shock prot...    61   4e-10
Z81113-10|CAB54300.1|  607|Caenorhabditis elegans Hypothetical p...    54   3e-08
Z81059-7|CAB54217.1|  607|Caenorhabditis elegans Hypothetical pr...    54   3e-08
Z49967-2|CAA90248.2|  450|Caenorhabditis elegans Hypothetical pr...    45   2e-05
L09634-1|AAA27967.1|  776|Caenorhabditis elegans Hypothetical pr...    42   1e-04
U50313-3|AAA92327.1|  335|Caenorhabditis elegans Cysteine protea...    29   1.3  
L39926-1|AAA98783.1|  335|Caenorhabditis elegans cathepsin B-lik...    29   1.3  
L39895-1|AAA98785.1|  335|Caenorhabditis elegans cathepsin B-lik...    29   1.3  
Z80220-6|CAB02305.1|  282|Caenorhabditis elegans Hypothetical pr...    29   1.7  
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass...    27   4.0  
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p...    27   7.0  
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr...    27   7.0  
U00047-3|AAA50689.2|  225|Caenorhabditis elegans Hypothetical pr...    26   9.2  

>Z80223-1|CAB02319.1|  640|Caenorhabditis elegans Hypothetical
           protein F26D10.3 protein.
          Length = 640

 Score =  119 bits (287), Expect = 7e-28
 Identities = 53/68 (77%), Positives = 62/68 (91%), Gaps = 1/68 (1%)
 Frame = +1

Query: 211 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGG 387
           YVAFTDTERLIGDAAKNQVAMNP+NT+FDAKRLIGRKF+D  VQ+DMKHWPF+V+S +G 
Sbjct: 41  YVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGA 100

Query: 388 XPKIKVAY 411
            PK++V Y
Sbjct: 101 KPKVQVEY 108



 Score = 37.9 bits (84), Expect = 0.003
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +3

Query: 141 VGVFQHGKVEIIANDQGQQ 197
           VGVF HGKVEIIANDQG +
Sbjct: 18  VGVFMHGKVEIIANDQGNR 36



 Score = 32.7 bits (71), Expect = 0.11
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +2

Query: 89  MAKAPAVGIDLGTTYSC 139
           M+K  AVGIDLGTTYSC
Sbjct: 1   MSKHNAVGIDLGTTYSC 17


>M18540-1|AAA28078.1|  640|Caenorhabditis elegans protein (
           C.elegans heat shockprotein 70A gene, complete cds. ).
          Length = 640

 Score =  119 bits (287), Expect = 7e-28
 Identities = 53/68 (77%), Positives = 62/68 (91%), Gaps = 1/68 (1%)
 Frame = +1

Query: 211 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGG 387
           YVAFTDTERLIGDAAKNQVAMNP+NT+FDAKRLIGRKF+D  VQ+DMKHWPF+V+S +G 
Sbjct: 41  YVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGA 100

Query: 388 XPKIKVAY 411
            PK++V Y
Sbjct: 101 KPKVQVEY 108



 Score = 37.9 bits (84), Expect = 0.003
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +3

Query: 141 VGVFQHGKVEIIANDQGQQ 197
           VGVF HGKVEIIANDQG +
Sbjct: 18  VGVFMHGKVEIIANDQGNR 36



 Score = 32.7 bits (71), Expect = 0.11
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +2

Query: 89  MAKAPAVGIDLGTTYSC 139
           M+K  AVGIDLGTTYSC
Sbjct: 1   MSKHNAVGIDLGTTYSC 17


>Z83108-5|CAB05508.1|  645|Caenorhabditis elegans Hypothetical
           protein F44E5.5 protein.
          Length = 645

 Score =  103 bits (246), Expect = 7e-23
 Identities = 45/65 (69%), Positives = 54/65 (83%)
 Frame = +1

Query: 211 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGX 390
           YVAFTDTERL+GDAAK+Q A NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V    G 
Sbjct: 41  YVAFTDTERLVGDAAKDQAARNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGK 100

Query: 391 PKIKV 405
           P I+V
Sbjct: 101 PVIEV 105



 Score = 31.5 bits (68), Expect = 0.25
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +2

Query: 89  MAKAPAVGIDLGTTYSC 139
           M+   A+GIDLGTTYSC
Sbjct: 1   MSSCKAIGIDLGTTYSC 17



 Score = 31.1 bits (67), Expect = 0.33
 Identities = 11/19 (57%), Positives = 17/19 (89%)
 Frame = +3

Query: 141 VGVFQHGKVEIIANDQGQQ 197
           VG++Q+GKVEI+AN +G +
Sbjct: 18  VGIYQNGKVEILANSEGNK 36


>Z83108-4|CAB05507.1|  645|Caenorhabditis elegans Hypothetical
           protein F44E5.4 protein.
          Length = 645

 Score =  103 bits (246), Expect = 7e-23
 Identities = 45/65 (69%), Positives = 54/65 (83%)
 Frame = +1

Query: 211 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGX 390
           YVAFTDTERL+GDAAK+Q A NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V    G 
Sbjct: 41  YVAFTDTERLVGDAAKDQAARNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGK 100

Query: 391 PKIKV 405
           P I+V
Sbjct: 101 PVIEV 105



 Score = 31.5 bits (68), Expect = 0.25
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +2

Query: 89  MAKAPAVGIDLGTTYSC 139
           M+   A+GIDLGTTYSC
Sbjct: 1   MSSCKAIGIDLGTTYSC 17



 Score = 31.1 bits (67), Expect = 0.33
 Identities = 11/19 (57%), Positives = 17/19 (89%)
 Frame = +3

Query: 141 VGVFQHGKVEIIANDQGQQ 197
           VG++Q+GKVEI+AN +G +
Sbjct: 18  VGIYQNGKVEILANSEGNK 36


>Z81467-1|CAB03871.1|  643|Caenorhabditis elegans Hypothetical
           protein C12C8.1 protein.
          Length = 643

 Score =  103 bits (246), Expect = 7e-23
 Identities = 44/65 (67%), Positives = 54/65 (83%)
 Frame = +1

Query: 211 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGX 390
           YVAFTDTERL+GDAAK+Q A NP NT+FDAKRLIGR+F++ TVQ+D+KHWPF V    G 
Sbjct: 41  YVAFTDTERLVGDAAKDQAARNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGK 100

Query: 391 PKIKV 405
           P ++V
Sbjct: 101 PVVEV 105



 Score = 31.1 bits (67), Expect = 0.33
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +2

Query: 89  MAKAPAVGIDLGTTYSC 139
           M+   A+GIDLGTTYSC
Sbjct: 1   MSTCKAIGIDLGTTYSC 17



 Score = 31.1 bits (67), Expect = 0.33
 Identities = 11/19 (57%), Positives = 17/19 (89%)
 Frame = +3

Query: 141 VGVFQHGKVEIIANDQGQQ 197
           VG++Q+GKVEI+AN +G +
Sbjct: 18  VGIYQNGKVEILANSEGNK 36


>U56965-1|AAB52671.1|  661|Caenorhabditis elegans Heat shock protein
           protein 3 protein.
          Length = 661

 Score = 93.9 bits (223), Expect = 4e-20
 Identities = 42/67 (62%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
 Frame = +1

Query: 211 YVAFTDTE--RLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDG 384
           YVAF+  +  RLIGDAAKNQ+ +NP NTIFDAKRLIGR + D TVQAD+KHWPF+V+   
Sbjct: 70  YVAFSGDQGDRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKS 129

Query: 385 GXPKIKV 405
             P ++V
Sbjct: 130 NKPSVEV 136



 Score = 33.1 bits (72), Expect = 0.081
 Identities = 13/19 (68%), Positives = 18/19 (94%)
 Frame = +3

Query: 141 VGVFQHGKVEIIANDQGQQ 197
           VGV+++G+VEIIANDQG +
Sbjct: 47  VGVYKNGRVEIIANDQGNR 65



 Score = 27.9 bits (59), Expect = 3.0
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = +2

Query: 107 VGIDLGTTYSC 139
           +GIDLGTTYSC
Sbjct: 36  IGIDLGTTYSC 46


>M26604-1|AAA28074.1|  661|Caenorhabditis elegans protein ( C.
           elegans BiP (hsp3)gene, complete cds. ).
          Length = 661

 Score = 93.9 bits (223), Expect = 4e-20
 Identities = 42/67 (62%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
 Frame = +1

Query: 211 YVAFTDTE--RLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDG 384
           YVAF+  +  RLIGDAAKNQ+ +NP NTIFDAKRLIGR + D TVQAD+KHWPF+V+   
Sbjct: 70  YVAFSGDQGDRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKS 129

Query: 385 GXPKIKV 405
             P ++V
Sbjct: 130 NKPSVEV 136



 Score = 33.1 bits (72), Expect = 0.081
 Identities = 13/19 (68%), Positives = 18/19 (94%)
 Frame = +3

Query: 141 VGVFQHGKVEIIANDQGQQ 197
           VGV+++G+VEIIANDQG +
Sbjct: 47  VGVYKNGRVEIIANDQGNR 65



 Score = 27.9 bits (59), Expect = 3.0
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = +2

Query: 107 VGIDLGTTYSC 139
           +GIDLGTTYSC
Sbjct: 36  IGIDLGTTYSC 46


>AF000264-1|AAC71123.1|  657|Caenorhabditis elegans Heat shock
           protein protein 4 protein.
          Length = 657

 Score = 90.6 bits (215), Expect = 4e-19
 Identities = 41/67 (61%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
 Frame = +1

Query: 211 YVAFTDT--ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDG 384
           YVAF+    ERLIGDAAKNQ+ +NP NTIFDAKRLIGR + + TVQ D+KHWPF++V   
Sbjct: 67  YVAFSGDQGERLIGDAAKNQLTINPENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKS 126

Query: 385 GXPKIKV 405
             P ++V
Sbjct: 127 NKPNVEV 133



 Score = 34.3 bits (75), Expect = 0.035
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = +3

Query: 141 VGVFQHGKVEIIANDQGQQ 197
           VGVF++G+VEIIANDQG +
Sbjct: 44  VGVFKNGRVEIIANDQGNR 62



 Score = 27.9 bits (59), Expect = 3.0
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = +2

Query: 107 VGIDLGTTYSC 139
           +GIDLGTTYSC
Sbjct: 33  IGIDLGTTYSC 43


>X07678-1|CAA30525.1|  487|Caenorhabditis elegans hsp6F protein.
          Length = 487

 Score = 60.9 bits (141), Expect = 4e-10
 Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = +1

Query: 214 VAFT-DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 375
           VAFT D ERL+G  AK Q   N  NT+F  KRLIGR++ED  VQ D+K  P+++V
Sbjct: 69  VAFTADGERLVGAPAKRQAVTNSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIV 123


>U88315-3|AAB42371.1|  657|Caenorhabditis elegans Heat shock protein
           protein 6 protein.
          Length = 657

 Score = 60.9 bits (141), Expect = 4e-10
 Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = +1

Query: 214 VAFT-DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 375
           VAFT D ERL+G  AK Q   N  NT+F  KRLIGR++ED  VQ D+K  P+++V
Sbjct: 69  VAFTADGERLVGAPAKRQAVTNSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIV 123


>Z81113-10|CAB54300.1|  607|Caenorhabditis elegans Hypothetical
           protein F11F1.1 protein.
          Length = 607

 Score = 54.4 bits (125), Expect = 3e-08
 Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
 Frame = +1

Query: 226 DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGXPKIK 402
           D + LIG  AK+ +     N++FD KR+IGR+++D  +Q DM  WPF+V   D G P ++
Sbjct: 43  DGDLLIGQHAKDVIG-KATNSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLE 101

Query: 403 V 405
           +
Sbjct: 102 I 102



 Score = 26.6 bits (56), Expect = 7.0
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = +2

Query: 104 AVGIDLGTTYSC 139
           ++GIDLGTT+SC
Sbjct: 2   SIGIDLGTTFSC 13


>Z81059-7|CAB54217.1|  607|Caenorhabditis elegans Hypothetical
           protein F11F1.1 protein.
          Length = 607

 Score = 54.4 bits (125), Expect = 3e-08
 Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
 Frame = +1

Query: 226 DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGXPKIK 402
           D + LIG  AK+ +     N++FD KR+IGR+++D  +Q DM  WPF+V   D G P ++
Sbjct: 43  DGDLLIGQHAKDVIG-KATNSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLE 101

Query: 403 V 405
           +
Sbjct: 102 I 102



 Score = 26.6 bits (56), Expect = 7.0
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = +2

Query: 104 AVGIDLGTTYSC 139
           ++GIDLGTT+SC
Sbjct: 2   SIGIDLGTTFSC 13


>Z49967-2|CAA90248.2|  450|Caenorhabditis elegans Hypothetical
           protein F54C9.2 protein.
          Length = 450

 Score = 44.8 bits (101), Expect = 2e-05
 Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
 Frame = +1

Query: 238 LIGDAAKNQVAMNPNNTIFDAKRLIGRKFE--DATVQADMKHWPFEVVSD 381
           LIG  A  Q   NP  TI+DAKR IGR FE  +    +D K +PF++  D
Sbjct: 82  LIGTRATEQQEHNPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLD 131


>L09634-1|AAA27967.1|  776|Caenorhabditis elegans Hypothetical
           protein C30C11.4 protein.
          Length = 776

 Score = 42.3 bits (95), Expect = 1e-04
 Identities = 22/54 (40%), Positives = 30/54 (55%)
 Frame = +1

Query: 214 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 375
           V+F   +R +G AA+  V  N  NT+ + K LIGRKF D   Q  +   P +VV
Sbjct: 39  VSFGPKDRSMGVAARQAVTTNIKNTVINFKHLIGRKFSDPVAQRFIPFIPCKVV 92


>U50313-3|AAA92327.1|  335|Caenorhabditis elegans Cysteine protease
           related protein 4 protein.
          Length = 335

 Score = 29.1 bits (62), Expect = 1.3
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -1

Query: 283 CWGSSPPGSWRHLR*DARCL*TQHKTEWSCXPWSLAMISTFPCWKT 146
           C G  P  +W++L     C    ++ ++ C P+SLA     PC +T
Sbjct: 150 CEGGYPINAWKYLVKSGFCTGGSYEAQFGCKPYSLA-----PCGET 190


>L39926-1|AAA98783.1|  335|Caenorhabditis elegans cathepsin B-like
           cysteine proteinaseprotein.
          Length = 335

 Score = 29.1 bits (62), Expect = 1.3
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -1

Query: 283 CWGSSPPGSWRHLR*DARCL*TQHKTEWSCXPWSLAMISTFPCWKT 146
           C G  P  +W++L     C    ++ ++ C P+SLA     PC +T
Sbjct: 150 CEGGYPINAWKYLVKSGFCTGGSYEAQFGCKPYSLA-----PCGET 190


>L39895-1|AAA98785.1|  335|Caenorhabditis elegans cathepsin B-like
           cysteine proteinaseprotein.
          Length = 335

 Score = 29.1 bits (62), Expect = 1.3
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -1

Query: 283 CWGSSPPGSWRHLR*DARCL*TQHKTEWSCXPWSLAMISTFPCWKT 146
           C G  P  +W++L     C    ++ ++ C P+SLA     PC +T
Sbjct: 150 CEGGYPINAWKYLVKSGFCTGGSYEAQFGCKPYSLA-----PCGET 190


>Z80220-6|CAB02305.1|  282|Caenorhabditis elegans Hypothetical
           protein T08G11.2 protein.
          Length = 282

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 198 DHSVLCCVHRHRASHRRCRQEPGGDEPQQHNI 293
           D  V+CCVH  R S+ +  Q+   D+ Q  N+
Sbjct: 23  DGEVVCCVHGRRCSYGKGNQDGKRDDNQYVNL 54


>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 177 protein.
          Length = 1667

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -2

Query: 399 DLRXASITDNLERPVLHVGLHSSIFELTSDETFGIEY 289
           DLR +S    L  PVL   +H+  FEL+S +   I Y
Sbjct: 81  DLRSSSDKVLLRLPVLKQEVHNISFELSSSDVLAIMY 117


>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
            protein 44, isoform f protein.
          Length = 6994

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 243  RRCRQEPGGDEPQQHNIRCQTS 308
            R   + P GDEP+QH I  +T+
Sbjct: 4602 REVYESPEGDEPEQHYIETKTT 4623


>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
            protein.
          Length = 6994

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 243  RRCRQEPGGDEPQQHNIRCQTS 308
            R   + P GDEP+QH I  +T+
Sbjct: 4602 REVYESPEGDEPEQHYIETKTT 4623


>U00047-3|AAA50689.2|  225|Caenorhabditis elegans Hypothetical
           protein ZK418.5 protein.
          Length = 225

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -3

Query: 122 PDRFLLRVLLPFCIFNQSCYLFXKTTQQTCAIDGFS 15
           P++FL+  +L  C+F+   Y   +T Q T ++ G+S
Sbjct: 161 PNKFLVSPILAMCVFSTFVY---QTVQHTFSLYGWS 193


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,795,990
Number of Sequences: 27780
Number of extensions: 166858
Number of successful extensions: 454
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -