Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_A04
(558 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 111 5e-26
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 79 4e-16
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 77 2e-15
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 64 1e-11
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 62 4e-11
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 62 7e-11
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 58 9e-10
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 55 8e-09
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 52 6e-08
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 44 2e-05
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 42 5e-05
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 41 1e-04
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 38 0.001
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 37 0.002
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 35 0.009
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 31 0.11
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 31 0.15
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 31 0.15
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 29 0.35
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 29 0.61
SPBC354.01 |gtp1|SPBC649.06|GTP binding protein Gtp1|Schizosacch... 27 1.4
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 27 1.4
SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces po... 27 2.5
SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomy... 27 2.5
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 4.3
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 25 7.5
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 25 7.5
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 25 7.5
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 25 10.0
SPAC2F3.08 |sut1||alpha-glucoside transporter |Schizosaccharomyc... 25 10.0
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 111 bits (268), Expect = 5e-26
Identities = 52/63 (82%), Positives = 57/63 (90%)
Frame = +2
Query: 251 REDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAX 430
+EDEYDYLFK VLIGDSGVGKS+LL RFTRNEFN+ESKSTIGVEFATR+I +D K IKA
Sbjct: 3 QEDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQ 62
Query: 431 IWD 439
IWD
Sbjct: 63 IWD 65
Score = 69.3 bits (162), Expect = 4e-13
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +3
Query: 441 TAGQERYRAITSAYYRGAVGALLVYDIAXPLSYENVERW 557
TAGQERYRAITSAYYRGAVGAL+VYDI S++NV RW
Sbjct: 66 TAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRW 104
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 79.0 bits (186), Expect = 4e-16
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = +2
Query: 260 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAXIWD 439
EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+ E++GKT+K IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWD 63
Score = 58.4 bits (135), Expect = 7e-10
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +3
Query: 423 KLXYGTTAGQERYRAITSAYYRGAVGALLVYDIAXPLSYENVERW 557
KL TAGQER+R ITS+YYRGA G ++VYD+ S+ NV++W
Sbjct: 58 KLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQW 102
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 77.0 bits (181), Expect = 2e-15
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +2
Query: 263 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAXIWD 439
YDYL K++LIGDSGVGKS LL RF+ + F +TIG++F R+IE+DGK IK IWD
Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Score = 60.9 bits (141), Expect = 1e-10
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = +3
Query: 423 KLXYGTTAGQERYRAITSAYYRGAVGALLVYDIAXPLSYENVERW 557
KL TAGQER+R IT+AYYRGA+G LL+YD+ S++NV W
Sbjct: 59 KLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTW 103
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 64.5 bits (150), Expect = 1e-11
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Frame = +2
Query: 254 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV----DGKTI 421
++ YDYL K+VL G SG GKS LL RF +N+++ + T+G++FA+R I V K I
Sbjct: 3 KESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRI 62
Query: 422 KAXIWD 439
K IWD
Sbjct: 63 KLQIWD 68
Score = 52.8 bits (121), Expect = 3e-08
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = +3
Query: 423 KLXYGTTAGQERYRAITSAYYRGAVGALLVYDIAXPLSYENVERW 557
KL TAGQE++R++ YYRGA GA+LVYD+ S+E + W
Sbjct: 63 KLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSW 107
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 62.5 bits (145), Expect = 4e-11
Identities = 25/54 (46%), Positives = 39/54 (72%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAXIWD 439
KVV++GDSGVGK+ L+++F +F+ E K+TIG +F T+ + VD K + +WD
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWD 63
Score = 44.0 bits (99), Expect = 2e-05
Identities = 17/39 (43%), Positives = 29/39 (74%)
Frame = +3
Query: 441 TAGQERYRAITSAYYRGAVGALLVYDIAXPLSYENVERW 557
TAGQER++++ A+YRGA ++VY++ S+++VE W
Sbjct: 64 TAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENW 102
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 61.7 bits (143), Expect = 7e-11
Identities = 22/57 (38%), Positives = 42/57 (73%)
Frame = +2
Query: 269 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAXIWD 439
+L KV+++G+SGVGK+S+++++ +F+ + K+TIG +F T+ + VD K + +WD
Sbjct: 7 HLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWD 63
Score = 44.4 bits (100), Expect = 1e-05
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +3
Query: 441 TAGQERYRAITSAYYRGAVGALLVYDIAXPLSYENVERW 557
TAGQER++++ A+YRGA +LVYD+ S+E ++ W
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSW 102
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 58.0 bits (134), Expect = 9e-10
Identities = 27/55 (49%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAXIWD 439
K+VL+GDS VGKSSL+ RF +++F+ +STIG F T+++ +D T +K IWD
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWD 70
Score = 46.4 bits (105), Expect = 3e-06
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +3
Query: 423 KLXYGTTAGQERYRAITSAYYRGAVGALLVYDIAXPLSYENVERW 557
KL TAGQERY+++ YYR A A++VYDI S E + W
Sbjct: 65 KLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSW 109
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 54.8 bits (126), Expect = 8e-09
Identities = 19/55 (34%), Positives = 42/55 (76%)
Frame = +2
Query: 275 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAXIWD 439
FK+V +G+ VGK+SL++RF ++F+ ++TIG++F ++++ ++ +T++ +WD
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Score = 44.0 bits (99), Expect = 2e-05
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 423 KLXYGTTAGQERYRAITSAYYRGAVGALLVYDIAXPLSYENVERW 557
+L TAGQER+R++ +Y R + A++VYDI S+ N E+W
Sbjct: 61 RLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKW 105
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 52.0 bits (119), Expect = 6e-08
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAXIWDXG 445
KV +IGDS +GK+SL+ + + F+ ES T+GV F ++I + I IWD G
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLG 67
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 43.6 bits (98), Expect = 2e-05
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAXIWD 439
K+V++GD GK+SLLS FT F E T+ + + VDGK+++ +WD
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVS-DCRVDGKSVQLALWD 62
Score = 26.2 bits (55), Expect = 3.3
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 441 TAGQERYRAITSAYYRGAVGALLVYDIAXPLSYENVE-RW 557
TAGQE Y + Y A L+ + I P S ENV +W
Sbjct: 63 TAGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKW 102
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 42.3 bits (95), Expect = 5e-05
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAXIWD 439
K+V++GD GK+SLL+ FT+ F + TI E I VDG +I+ +WD
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTI-FENYIHDIFVDGNSIELSLWD 67
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 40.7 bits (91), Expect = 1e-04
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +2
Query: 275 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAXIWD 439
FK+VL+GD G GK++ + R EF + +T+GVE + I +WD
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWD 64
Score = 33.9 bits (74), Expect = 0.016
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 441 TAGQERYRAITSAYYRGAVGALLVYDIAXPLSYENVERW 557
TAGQE+ + YY ++++D+ ++Y+NV W
Sbjct: 65 TAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHW 103
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 37.5 bits (83), Expect = 0.001
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAXIWD 439
K+V++GD GK+ LL F++ F T+ E +EVDG+ I+ +WD
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGRHIELALWD 60
Score = 27.1 bits (57), Expect = 1.9
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 441 TAGQERYRAITSAYYRGAVGALLVYDIAXPLSYENV-ERW 557
TAGQE Y + Y + L+ + + P S +NV E+W
Sbjct: 61 TAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKW 100
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAXIWD 439
K+V++GD GK+ LL F++ F T+ E +EVDG+ ++ +WD
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGRHVELALWD 60
Score = 25.4 bits (53), Expect = 5.7
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 441 TAGQERYRAITSAYYRGAVGALLVYDIAXPLSYENV-ERW 557
TAGQE Y + Y + L+ + + P S +NV E+W
Sbjct: 61 TAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKW 100
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 34.7 bits (76), Expect = 0.009
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 441 TAGQERYRAITSAYYRGAVGALLVYDIAXPLSYENV 548
TAGQE Y A+ Y R G LLVY+I S++ +
Sbjct: 63 TAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEI 98
Score = 34.3 bits (75), Expect = 0.012
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +2
Query: 275 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 415
+K+V++GD GVGKS+L + ++ F E TI + + E+DG+
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSY-RKKCEIDGE 54
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 31.1 bits (67), Expect = 0.11
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATR-SIEVDGKTIKAXIWD 439
K+V++GD G GK+ LL F+ F T+ + T + + K I+ +WD
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWD 70
Score = 29.1 bits (62), Expect = 0.46
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 441 TAGQERYRAITSAYYRGAVGALLVYDIAXPLSYENV-ERW 557
TAGQE Y + Y + LL + I P S NV E+W
Sbjct: 71 TAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKW 110
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 30.7 bits (66), Expect = 0.15
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFA 388
K V++GD VGK+ LL +T N+F + T+ +A
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYA 41
Score = 29.5 bits (63), Expect = 0.35
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 441 TAGQERYRAITSAYYRGAVGALLVYDIAXPLSYENV-ERW 557
TAGQE Y + Y L+ + + P S+ENV E+W
Sbjct: 58 TAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKW 97
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 30.7 bits (66), Expect = 0.15
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 441 TAGQERYRAITSAYYRGAVGALLVYDIAXPLSYENVE 551
TAGQ+ Y + S + G G +LVY I S+E V+
Sbjct: 61 TAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVK 97
Score = 27.5 bits (58), Expect = 1.4
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAXIWD 439
++ ++G VGKSSL ++ N F TI F +++I+ G+ I D
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTF-SKNIKYKGQEFATEIID 60
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 29.5 bits (63), Expect = 0.35
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNE 346
+VV+ GD GVGKSSL+S + +
Sbjct: 5 RVVICGDQGVGKSSLISALIQED 27
Score = 27.5 bits (58), Expect = 1.4
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +2
Query: 260 EYDY-LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTI--GVEF 385
+YD +F ++G GK++LLS F N N + +T+ VEF
Sbjct: 416 KYDRNVFLCFVVGSKSCGKTALLSSFINNNTNRLTPNTVVNSVEF 460
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 28.7 bits (61), Expect = 0.61
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 281 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDG 412
VV+ G SGVGKS+LL R ++ + S R+ E DG
Sbjct: 21 VVVFGPSGVGKSTLLKRLLKDHGDKLGFSVSHTTRTPRAGEKDG 64
>SPBC354.01 |gtp1|SPBC649.06|GTP binding protein
Gtp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 27.5 bits (58), Expect = 1.4
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +2
Query: 236 TKMGTREDEYDYL----FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIE 403
+K G + + +D L +V IG VGKS+LLS T+ + S + +E
Sbjct: 46 SKSGPKGEGFDVLKSGDARVAFIGFPSVGKSTLLSAITKTKSATASYEFTTLTAIPGVLE 105
Query: 404 VDGKTIK 424
DG I+
Sbjct: 106 YDGAEIQ 112
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -1
Query: 381 STPMVDL--DSKLNSFLVKRDRRLLLPTPESPMS 286
ST M DL D +++ FL+ R++ +PT + P S
Sbjct: 219 STGMADLSKDDRISRFLILREQSKQIPTQQKPSS 252
>SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 433
Score = 26.6 bits (56), Expect = 2.5
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +2
Query: 143 VIFVSNIIFIYGHLDVSKLTDF*RRLKSSG*TKMGTREDEYDYLFKVVLIGDSGVGKSSL 322
+IF + + + V+KL +L S+G + E +YD KVV I SG KSSL
Sbjct: 259 IIFDPDCAYAFPPYPVTKLI----KLASTGYEYVCNVETDYDENSKVVSIPHSGPSKSSL 314
>SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 537
Score = 26.6 bits (56), Expect = 2.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 324 RRLLLPTPESPMSTTLNK*SYSSSLVPILVYPE 226
R L+ P+P S +STT+NK + S+ + PE
Sbjct: 6 RILITPSPLSDISTTINKPNVHPSMSLLKALPE 38
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.8 bits (54), Expect = 4.3
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 275 FKVVLIGDSGVGKSSLLSR-FTRNEFNLESKSTIG 376
F V+++G+SG GKS+L++ R+ + KS G
Sbjct: 96 FNVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTG 130
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 25.0 bits (52), Expect = 7.5
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -1
Query: 366 DLDSKLNSFLVKRDRRLLLPTPESPMSTTLNK*SYSSSLVPILVYPELFSRR 211
DL+SKL F RD+ L + T LN S+ S + L PE S +
Sbjct: 276 DLESKLYRFEEYRDKVATLELENEKIQTELN--SWKSLITNELPTPEAVSNK 325
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 25.0 bits (52), Expect = 7.5
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = -1
Query: 369 VDLDSKLNSFLVKRDRRLLLPTPESPM-STTLNK*SYSSSLVPILVYPELF--SRRQKSV 199
VD KL+++ + R++ L P+ S LNK +YS+ P+ ++ +L+ +RR K +
Sbjct: 66 VDGSEKLHAYSFTQ-RKISLAKNLIPLFSVDLNKDTYSALKAPLKIWSKLWEDNRRLKKI 124
Query: 198 SFETS 184
TS
Sbjct: 125 IKYTS 129
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 25.0 bits (52), Expect = 7.5
Identities = 9/32 (28%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 281 VVLIGDSGVGKSSLLSRFTR-NEFNLESKSTI 373
++++G+S +GK++ ++ F + N+ N K T+
Sbjct: 121 LIVVGESSLGKTTFVNSFLQSNDTNFRPKKTM 152
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 24.6 bits (51), Expect = 10.0
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 299 SGVGKSSLLSRFTRNEFNLES 361
SGV SSL S +RN+ NL S
Sbjct: 395 SGVESSSLSSAISRNQSNLSS 415
>SPAC2F3.08 |sut1||alpha-glucoside transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 553
Score = 24.6 bits (51), Expect = 10.0
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -1
Query: 381 STPMVDLDSKLNSFLVKRD--RRLLLPTPESPMSTTLNK*SYSSSLVPIL 238
+TP + S+ SF + + RR LLP+ S M+T +K +PIL
Sbjct: 378 NTPRLGNLSETTSFRSENEPSRRRLLPSSRSIMTTISSKVQIKGLTLPIL 427
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,007,767
Number of Sequences: 5004
Number of extensions: 36778
Number of successful extensions: 157
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 233995432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -