Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_A02
(360 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X51346-1|CAA35739.1| 303|Homo sapiens protein ( Human jun-D mRN... 46 4e-05
EF044249-1|ABJ53425.1| 347|Homo sapiens jun D proto-oncogene pr... 46 4e-05
AK223630-1|BAD97350.1| 347|Homo sapiens jun D proto-oncogene va... 46 4e-05
X56681-1|CAA40010.1| 347|Homo sapiens junD protein protein. 44 1e-04
J04111-1|AAA59197.1| 331|Homo sapiens JUN protein. 34 0.15
CR541724-1|CAG46525.1| 331|Homo sapiens JUN protein. 34 0.15
BT019759-1|AAV38564.1| 331|Homo sapiens v-jun sarcoma virus 17 ... 34 0.15
BC068522-1|AAH68522.1| 331|Homo sapiens jun oncogene protein. 34 0.15
BC006175-1|AAH06175.1| 331|Homo sapiens jun oncogene protein. 34 0.15
AY217548-1|AAO22993.1| 331|Homo sapiens v-jun sarcoma virus 17 ... 34 0.15
AL136985-1|CAC10201.1| 331|Homo sapiens jun oncogene protein. 34 0.15
CR541752-1|CAG46552.1| 331|Homo sapiens JUN protein. 33 0.20
BC117452-1|AAI17453.1| 797|Homo sapiens interphotoreceptor matr... 29 4.3
BC117450-1|AAI17451.1| 797|Homo sapiens interphotoreceptor matr... 29 4.3
AL392166-2|CAI41298.1| 797|Homo sapiens interphotoreceptor matr... 29 4.3
AL356962-1|CAC36327.2| 797|Homo sapiens interphotoreceptor matr... 29 4.3
AF047492-1|AAC03789.2| 797|Homo sapiens interphotoreceptor matr... 29 4.3
AF017776-1|AAC68835.1| 797|Homo sapiens interphotoreceptor matr... 29 4.3
>X51346-1|CAA35739.1| 303|Homo sapiens protein ( Human jun-D mRNA
for JUN-D protein. ).
Length = 303
Score = 46.0 bits (104), Expect = 4e-05
Identities = 34/81 (41%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Frame = +2
Query: 122 AALWKTLKGP*PXDVGRGGKRSRIAAP---VLSSPDLQMXKLGSPEXEKLIIQ-NGMVXX 289
AA K P P + G S AAP +L+SPDL + KL SPE E+LIIQ NG+V
Sbjct: 15 AAALKPAAAPPPTPLRADGAPS--AAPPDGLLASPDLGLLKLASPELERLIIQSNGLV-- 70
Query: 290 XXXXXXXXVLFPAXAPTEEQQ 352
L+P A +EEQ+
Sbjct: 71 TTTPTSSQFLYPKVAASEEQE 91
>EF044249-1|ABJ53425.1| 347|Homo sapiens jun D proto-oncogene
protein.
Length = 347
Score = 46.0 bits (104), Expect = 4e-05
Identities = 34/81 (41%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Frame = +2
Query: 122 AALWKTLKGP*PXDVGRGGKRSRIAAP---VLSSPDLQMXKLGSPEXEKLIIQ-NGMVXX 289
AA K P P + G S AAP +L+SPDL + KL SPE E+LIIQ NG+V
Sbjct: 59 AAALKPAAAPPPTPLRADGAPS--AAPPDGLLASPDLGLLKLASPELERLIIQSNGLV-- 114
Query: 290 XXXXXXXXVLFPAXAPTEEQQ 352
L+P A +EEQ+
Sbjct: 115 TTTPTSSQFLYPKVAASEEQE 135
>AK223630-1|BAD97350.1| 347|Homo sapiens jun D proto-oncogene
variant protein.
Length = 347
Score = 46.0 bits (104), Expect = 4e-05
Identities = 34/81 (41%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Frame = +2
Query: 122 AALWKTLKGP*PXDVGRGGKRSRIAAP---VLSSPDLQMXKLGSPEXEKLIIQ-NGMVXX 289
AA K P P + G S AAP +L+SPDL + KL SPE E+LIIQ NG+V
Sbjct: 59 AAALKPAAAPPPTPLRADGAPS--AAPPDGLLASPDLGLLKLASPELERLIIQSNGLV-- 114
Query: 290 XXXXXXXXVLFPAXAPTEEQQ 352
L+P A +EEQ+
Sbjct: 115 TTTPTSSQFLYPKVAASEEQE 135
>X56681-1|CAA40010.1| 347|Homo sapiens junD protein protein.
Length = 347
Score = 44.4 bits (100), Expect = 1e-04
Identities = 38/104 (36%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Frame = +2
Query: 68 GIPATAWRPPSMTSNILSAALWK----TLK-GP*PXDVGRGGKRSRIAAP---VLSSPDL 223
G P TA M + L+ +L + LK P P + AAP +L+SPDL
Sbjct: 34 GAPPTAAAGSMMKKDALTLSLSEQVAAALKPAPAPASYPPAADGAPSAAPPDGLLASPDL 93
Query: 224 QMXKLGSPEXEKLIIQ-NGMVXXXXXXXXXXVLFPAXAPTEEQQ 352
+ KL SPE E+LIIQ NG+V L+P A +EEQ+
Sbjct: 94 GLLKLASPELERLIIQSNGLV--TTTPTSSQFLYPKVAASEEQE 135
>J04111-1|AAA59197.1| 331|Homo sapiens JUN protein.
Length = 331
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 203 VLSSPDLQMXKLGSPEXEKLIIQNGMVXXXXXXXXXXVLFPAXAPTEEQQ 352
+L+SPD+ + KL SPE E+LIIQ+ L P T+EQ+
Sbjct: 60 LLTSPDVGLLKLASPELERLIIQSSNGHITTTPTPTQFLCPKNV-TDEQE 108
>CR541724-1|CAG46525.1| 331|Homo sapiens JUN protein.
Length = 331
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 203 VLSSPDLQMXKLGSPEXEKLIIQNGMVXXXXXXXXXXVLFPAXAPTEEQQ 352
+L+SPD+ + KL SPE E+LIIQ+ L P T+EQ+
Sbjct: 60 LLTSPDVGLLKLASPELERLIIQSSNGHITTTPTPTQFLCPKNV-TDEQE 108
>BT019759-1|AAV38564.1| 331|Homo sapiens v-jun sarcoma virus 17
oncogene homolog (avian) protein.
Length = 331
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 203 VLSSPDLQMXKLGSPEXEKLIIQNGMVXXXXXXXXXXVLFPAXAPTEEQQ 352
+L+SPD+ + KL SPE E+LIIQ+ L P T+EQ+
Sbjct: 60 LLTSPDVGLLKLASPELERLIIQSSNGHITTTPTPTQFLCPKNV-TDEQE 108
>BC068522-1|AAH68522.1| 331|Homo sapiens jun oncogene protein.
Length = 331
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 203 VLSSPDLQMXKLGSPEXEKLIIQNGMVXXXXXXXXXXVLFPAXAPTEEQQ 352
+L+SPD+ + KL SPE E+LIIQ+ L P T+EQ+
Sbjct: 60 LLTSPDVGLLKLASPELERLIIQSSNGHITTTPTPTQFLCPKNV-TDEQE 108
>BC006175-1|AAH06175.1| 331|Homo sapiens jun oncogene protein.
Length = 331
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 203 VLSSPDLQMXKLGSPEXEKLIIQNGMVXXXXXXXXXXVLFPAXAPTEEQQ 352
+L+SPD+ + KL SPE E+LIIQ+ L P T+EQ+
Sbjct: 60 LLTSPDVGLLKLASPELERLIIQSSNGHITTTPTPTQFLCPKNV-TDEQE 108
>AY217548-1|AAO22993.1| 331|Homo sapiens v-jun sarcoma virus 17
oncogene homolog (avian) protein.
Length = 331
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 203 VLSSPDLQMXKLGSPEXEKLIIQNGMVXXXXXXXXXXVLFPAXAPTEEQQ 352
+L+SPD+ + KL SPE E+LIIQ+ L P T+EQ+
Sbjct: 60 LLTSPDVGLLKLASPELERLIIQSSNGHITTTPTPTQFLCPKNV-TDEQE 108
>AL136985-1|CAC10201.1| 331|Homo sapiens jun oncogene protein.
Length = 331
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 203 VLSSPDLQMXKLGSPEXEKLIIQNGMVXXXXXXXXXXVLFPAXAPTEEQQ 352
+L+SPD+ + KL SPE E+LIIQ+ L P T+EQ+
Sbjct: 60 LLTSPDVGLLKLASPELERLIIQSSNGHITTTPTPTQFLCPKNV-TDEQE 108
>CR541752-1|CAG46552.1| 331|Homo sapiens JUN protein.
Length = 331
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +2
Query: 203 VLSSPDLQMXKLGSPEXEKLIIQN 274
+L+SPD+ + KL SPE E+LIIQ+
Sbjct: 60 LLTSPDMGLLKLASPELERLIIQS 83
>BC117452-1|AAI17453.1| 797|Homo sapiens interphotoreceptor matrix
proteoglycan 1 protein.
Length = 797
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 68 GIPATAWRPPSMTSNILSAA 127
G+P T+W PP+M S LS A
Sbjct: 428 GLPDTSWSPPAMASTSLSEA 447
>BC117450-1|AAI17451.1| 797|Homo sapiens interphotoreceptor matrix
proteoglycan 1 protein.
Length = 797
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 68 GIPATAWRPPSMTSNILSAA 127
G+P T+W PP+M S LS A
Sbjct: 428 GLPDTSWSPPAMASTSLSEA 447
>AL392166-2|CAI41298.1| 797|Homo sapiens interphotoreceptor matrix
proteoglycan 1 protein.
Length = 797
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 68 GIPATAWRPPSMTSNILSAA 127
G+P T+W PP+M S LS A
Sbjct: 428 GLPDTSWSPPAMASTSLSEA 447
>AL356962-1|CAC36327.2| 797|Homo sapiens interphotoreceptor matrix
proteoglycan 1 protein.
Length = 797
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 68 GIPATAWRPPSMTSNILSAA 127
G+P T+W PP+M S LS A
Sbjct: 428 GLPDTSWSPPAMASTSLSEA 447
>AF047492-1|AAC03789.2| 797|Homo sapiens interphotoreceptor matrix
proteoglycan 150 protein.
Length = 797
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 68 GIPATAWRPPSMTSNILSAA 127
G+P T+W PP+M S LS A
Sbjct: 428 GLPDTSWSPPAMASTSLSEA 447
>AF017776-1|AAC68835.1| 797|Homo sapiens interphotoreceptor matrix
protein.
Length = 797
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 68 GIPATAWRPPSMTSNILSAA 127
G+P T+W PP+M S LS A
Sbjct: 428 GLPDTSWSPPAMASTSLSEA 447
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,838,515
Number of Sequences: 237096
Number of extensions: 1048956
Number of successful extensions: 1791
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1791
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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