Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_A02
         (360 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y12573-1|CAA73154.1|  289|Drosophila melanogaster Jun protein.         34   0.063
M36181-1|AAA28650.1|  289|Drosophila melanogaster protein ( D.me...    34   0.063
AY058562-1|AAL13791.1|  289|Drosophila melanogaster LD25202p pro...    34   0.063
AE013599-1018|AAM71059.1|  289|Drosophila melanogaster CG2275-PB...    34   0.063
AE013599-1017|AAF58845.1|  289|Drosophila melanogaster CG2275-PA...    34   0.063
AE014297-3561|AAF56307.1|  272|Drosophila melanogaster CG13622-P...    32   0.19 
AJ276483-1|CAB81550.1|  197|Drosophila melanogaster putative Sar...    27   9.5  

>Y12573-1|CAA73154.1|  289|Drosophila melanogaster Jun protein.
          Length = 289

 Score = 33.9 bits (74), Expect = 0.063
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +2

Query: 170 RGGKRSRIAAP-VLSSPDLQMXKLGSPEXEKLIIQNGMV 283
           +  K  RI AP V++SPDL    + +P+ EK+++ N ++
Sbjct: 67  KSAKNKRIFAPLVINSPDLSSKTVNTPDLEKILLSNNLM 105


>M36181-1|AAA28650.1|  289|Drosophila melanogaster protein (
           D.melanogaster Djungene, complete cds. ).
          Length = 289

 Score = 33.9 bits (74), Expect = 0.063
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +2

Query: 170 RGGKRSRIAAP-VLSSPDLQMXKLGSPEXEKLIIQNGMV 283
           +  K  RI AP V++SPDL    + +P+ EK+++ N ++
Sbjct: 67  KSAKNKRIFAPLVINSPDLSSKTVNTPDLEKILLSNNLM 105


>AY058562-1|AAL13791.1|  289|Drosophila melanogaster LD25202p
           protein.
          Length = 289

 Score = 33.9 bits (74), Expect = 0.063
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +2

Query: 170 RGGKRSRIAAP-VLSSPDLQMXKLGSPEXEKLIIQNGMV 283
           +  K  RI AP V++SPDL    + +P+ EK+++ N ++
Sbjct: 67  KSAKNKRIFAPLVINSPDLSSKTVNTPDLEKILLSNNLM 105


>AE013599-1018|AAM71059.1|  289|Drosophila melanogaster CG2275-PB,
           isoform B protein.
          Length = 289

 Score = 33.9 bits (74), Expect = 0.063
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +2

Query: 170 RGGKRSRIAAP-VLSSPDLQMXKLGSPEXEKLIIQNGMV 283
           +  K  RI AP V++SPDL    + +P+ EK+++ N ++
Sbjct: 67  KSAKNKRIFAPLVINSPDLSSKTVNTPDLEKILLSNNLM 105


>AE013599-1017|AAF58845.1|  289|Drosophila melanogaster CG2275-PA,
           isoform A protein.
          Length = 289

 Score = 33.9 bits (74), Expect = 0.063
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +2

Query: 170 RGGKRSRIAAP-VLSSPDLQMXKLGSPEXEKLIIQNGMV 283
           +  K  RI AP V++SPDL    + +P+ EK+++ N ++
Sbjct: 67  KSAKNKRIFAPLVINSPDLSSKTVNTPDLEKILLSNNLM 105


>AE014297-3561|AAF56307.1|  272|Drosophila melanogaster CG13622-PA
           protein.
          Length = 272

 Score = 32.3 bits (70), Expect = 0.19
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +1

Query: 262 DHSERYGDNRYPYSGSACLISRXSTYG 342
           +H ERY DNR  Y  SAC+ SR  + G
Sbjct: 113 NHHERYTDNRRLYEQSACVASRQRSQG 139


>AJ276483-1|CAB81550.1|  197|Drosophila melanogaster putative Sar1
           protein protein.
          Length = 197

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 11/55 (20%), Positives = 28/55 (50%)
 Frame = -2

Query: 233 STFVNLARRERVQRFVNVSHPAQHXKVRGLLRFSTGPLRGYCSS*KVVSMLWPEF 69
           +T +++ + +++ + V   HP+      G +RF+T  L G+     +   +W ++
Sbjct: 46  TTLLHMLKDDKLAQHVPTLHPSSEELSIGNMRFTTFDLGGHTQGKCLARRVWKDY 100


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,348,998
Number of Sequences: 53049
Number of extensions: 325253
Number of successful extensions: 681
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 901135692
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)