Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_P24
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 38 0.002
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 31 0.15
SPBC16A3.13 |meu7|aah4|alpha-amylase homolog Aah4|Schizosaccharo... 27 2.4
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 27 3.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 3.1
SPBC2D10.18 |abc1|coq8|ABC1 kinase family protein|Schizosaccharo... 26 4.1
SPAC4C5.01 |||haloacid dehalogenase-like hydrolase |Schizosaccha... 25 7.2
SPAC24H6.11c |||sulfate transporter |Schizosaccharomyces pombe|c... 25 7.2
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 25 9.5
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 37.5 bits (83), Expect = 0.002
Identities = 35/140 (25%), Positives = 46/140 (32%), Gaps = 7/140 (5%)
Frame = +1
Query: 247 GGYHAASPRSAEPADMKYQHPLH-SGGSPSPGAPVIGNPWTSLPPADPWAMXXXXXXXXX 423
G + P EP + P+H G P P+ P +PP P
Sbjct: 217 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP--PPMHHEPGEHMPP 274
Query: 424 PDVKPPPAPHDHRHLQHAAHGWHAPVVSPHYGAGS---PVTLH---GGYPMPVHQHHMLR 585
P + P H H G H P H+ G P +H G + P HH
Sbjct: 275 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 334
Query: 586 DIQPSPHPLHHHAMERDQPE 645
+ P P HH E + PE
Sbjct: 335 EHMPPPPFKHHELEEHEGPE 354
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 31.1 bits (67), Expect = 0.15
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -1
Query: 645 LGLIPLHGVMMQRMRRGLDVSEHMVLVHGHWVSSMQCDGRARTVMRA 505
LGLIP+ + MR DV + L+ ++VS++ + A T +RA
Sbjct: 966 LGLIPIPVPPLDHMRLSEDVPAFLFLIKHYYVSAVLVNSEADTALRA 1012
>SPBC16A3.13 |meu7|aah4|alpha-amylase homolog
Aah4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 774
Score = 27.1 bits (57), Expect = 2.4
Identities = 27/95 (28%), Positives = 32/95 (33%), Gaps = 19/95 (20%)
Frame = +1
Query: 427 DVKPPPAPH-----DHRHLQHAAHGWHA--PVVSPHYGAG--------SPVTLHGGYPMP 561
D P P PH DH+ +H H H P PH G HG +P P
Sbjct: 263 DKFPRPVPHNGTKPDHKPWKHEEHCHHGKFPRPIPHNGTKPDHKPWKHEEHCHHGRFPRP 322
Query: 562 VHQHHMLRDIQPSPH----PLHHHAMERDQPEEDT 654
V + D +P H HH R P T
Sbjct: 323 VPHNGTKPDHKPWKHEEHCSCHHDKFSRPVPHNGT 357
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 297 VPASVALGRVAVPGGARDRE 356
V A+ ALGR+AVPGGA E
Sbjct: 102 VLAAKALGRLAVPGGALTSE 121
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 3.1
Identities = 23/83 (27%), Positives = 30/83 (36%)
Frame = +1
Query: 202 AATTYMPAEMELGNIGGYHAASPRSAEPADMKYQHPLHSGGSPSPGAPVIGNPWTSLPPA 381
AA +P + + NI +SP S P D PL S SP AP+ +PP
Sbjct: 964 AAPPSIPPPLPVSNI----LSSPTSEPPKDHPPSAPLSKPVSTSPAAPL-----ARVPPV 1014
Query: 382 DPWAMXXXXXXXXXPDVKPPPAP 450
+ D P P P
Sbjct: 1015 PKLSSKAPPVPLPSADAPPIPVP 1037
>SPBC2D10.18 |abc1|coq8|ABC1 kinase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 610
Score = 26.2 bits (55), Expect = 4.1
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -2
Query: 311 NGCWYFMSAGSALRGDAAWYPPMLPSSISA-GMYVVAAMAPYLRSTVD 171
+G W ++ GSA+R A Y SSI+A +Y + + RST D
Sbjct: 4 SGLWELITIGSAVRNVAKSYLKAEASSITAKQLYDASKITSSKRSTSD 51
>SPAC4C5.01 |||haloacid dehalogenase-like hydrolase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 246
Score = 25.4 bits (53), Expect = 7.2
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -1
Query: 183 IHGGRRLAGSKALEPSTGLFFRENCAGVALRCGSGGGHLTSPDSTASDM 37
I+ R+ G KAL PS + F ++ GV +G + PD+ ++
Sbjct: 163 INESRKQRGLKALTPSQCIAFEDSIPGVKSAKAAGMHVIWVPDAAIKNL 211
>SPAC24H6.11c |||sulfate transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 958
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 166 SCRLEGSRAFNWLILS 119
S RLEGS +FNW LS
Sbjct: 311 SSRLEGSVSFNWASLS 326
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +1
Query: 424 PDVKPPPAPHDHRHLQHAAHGWHAPVVSPHYGAGSPVTLHGGYPMPVHQHHMLRDIQPSP 603
P ++PPP P H + +P + PH P + + VH + + P
Sbjct: 151 PVLRPPPVPQVPSHWYPVS--LPSPNL-PHQPISKPPVIPNLPKLQVHPNRL-------P 200
Query: 604 HPLHHH 621
HP+H+H
Sbjct: 201 HPIHNH 206
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,534,735
Number of Sequences: 5004
Number of extensions: 51353
Number of successful extensions: 199
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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