Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_P24
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 39 0.004
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 36 0.019
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 34 0.10
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 33 0.13
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical pr... 32 0.31
AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein. 32 0.31
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 32 0.31
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 32 0.41
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 32 0.41
Z98866-11|CAB11564.2| 335|Caenorhabditis elegans Hypothetical p... 31 0.71
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 31 0.71
U62896-1|AAB17868.1| 335|Caenorhabditis elegans PIE-1 protein. 31 0.71
Z30662-4|CAA83139.3| 376|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 30 1.6
AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical ... 30 1.6
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 2.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 2.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 2.9
Z93393-15|CAE54926.1| 347|Caenorhabditis elegans Hypothetical p... 29 3.8
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 3.8
AC024783-3|AAL32245.1| 273|Caenorhabditis elegans Hypothetical ... 29 3.8
Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical pr... 28 5.0
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 28 5.0
U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical pr... 28 5.0
U28993-3|AAT81196.1| 635|Caenorhabditis elegans Hypothetical pr... 28 5.0
U28993-2|AAK31497.1| 720|Caenorhabditis elegans Hypothetical pr... 28 5.0
U22832-3|AAA64508.2| 359|Caenorhabditis elegans Hypothetical pr... 28 5.0
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 23 5.4
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 6.7
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 28 6.7
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 6.7
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 28 6.7
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 6.7
AC024783-2|AAL32246.1| 275|Caenorhabditis elegans Hypothetical ... 28 6.7
Z83226-4|CAI79261.2| 206|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 27 8.8
U56965-10|AAB52670.1| 1041|Caenorhabditis elegans Nicotinamide n... 27 8.8
L23647-4|AAK29991.1| 233|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocar... 27 8.8
AC026301-5|AAK68894.1| 745|Caenorhabditis elegans Hypothetical ... 27 8.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 27 8.8
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/58 (34%), Positives = 24/58 (41%)
Frame = +1
Query: 436 PPPAPHDHRHLQHAAHGWHAPVVSPHYGAGSPVTLHGGYPMPVHQHHMLRDIQPSPHP 609
PPP P+ H H AH H P+ G PV G+ +P QH P P P
Sbjct: 70 PPPYPYQHPHQPPPAHPHHLQHPHPYAYPGYPVPGQEGHQVPAPQHGDHEASPPPPPP 127
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 36.3 bits (80), Expect = 0.019
Identities = 35/131 (26%), Positives = 46/131 (35%), Gaps = 2/131 (1%)
Frame = +1
Query: 259 AASPRSAEPADMKYQHPLHSGGSPSPGAPVIGNPWTSLP-PADPWAMXXXXXXXXXPDVK 435
A P+ A PA P P+P P+ P ++P PA P A P
Sbjct: 55 APYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPA---PYPQHAVPAPA 111
Query: 436 PPPAPHDHRHLQHAAHGWHAPVVSPHYGAGSPVTLHGGYPMPVHQHHMLRDIQPSPHPLH 615
PPPAP+ + A P P P H YP P H +P P +
Sbjct: 112 PPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPH--YPPPPPAPHSAYIDHSAPRPAY 169
Query: 616 -HHAMERDQPE 645
H+ QP+
Sbjct: 170 IEHSAPPPQPQ 180
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 445 APHDHRHLQHAAHGWHAPVVSPHYGAGSPVTLHGGYPMPVHQHHMLRDIQPSP 603
+PH H +H H+PV S A SP ++H + +HH + Q SP
Sbjct: 760 SPHVSEHFEHHEEAQHSPVASQEEAARSP-SVHSSHASEHFEHH--EEAQDSP 809
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +1
Query: 436 PPPAPHDHRHLQHAAHGWHAPVVSPHYGAGSPVTL---HGGYPMPVHQHHMLRDIQPSPH 606
PP P RH +H + H+P H G P HG + P H HH R PS H
Sbjct: 359 PPHCPG--RHGRHGSRS-HSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGR--SPSRH 413
Query: 607 PLHHH 621
HHH
Sbjct: 414 GHHHH 418
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 32.7 bits (71), Expect = 0.23
Identities = 31/120 (25%), Positives = 43/120 (35%), Gaps = 3/120 (2%)
Frame = +1
Query: 292 MKYQHPLHSGGSPSPGAPVIGNPWTS--LPPADPWAMXXXXXXXXXPDVKPPPAPHDHRH 465
M +P S G P+PG P+ + +P + P P D +
Sbjct: 214 MPQGYPGVSRGGPTPGQPMGRGAMMNGAMPRSGPMPTQGRPGIPPNQQAMMQPMMTDRQF 273
Query: 466 LQHAAHGWHAPVVSPHYGAGSPVTLHGGYPMPVHQHHML-RDIQPSPHPLHHHAMERDQP 642
+QH +G P YG GGYPM +HQ M+ + QP P M P
Sbjct: 274 MQHGQYGQQRPEFMQQYGR------PGGYPM-MHQGMMMDSNGQPIRGPNQMMMMSNGHP 326
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 32.7 bits (71), Expect = 0.23
Identities = 31/120 (25%), Positives = 43/120 (35%), Gaps = 3/120 (2%)
Frame = +1
Query: 292 MKYQHPLHSGGSPSPGAPVIGNPWTS--LPPADPWAMXXXXXXXXXPDVKPPPAPHDHRH 465
M +P S G P+PG P+ + +P + P P D +
Sbjct: 214 MPQGYPGVSRGGPTPGQPMGRGAMMNGAMPRSGPMPTQGRPGIPPNQQAMMQPMMTDRQF 273
Query: 466 LQHAAHGWHAPVVSPHYGAGSPVTLHGGYPMPVHQHHML-RDIQPSPHPLHHHAMERDQP 642
+QH +G P YG GGYPM +HQ M+ + QP P M P
Sbjct: 274 MQHGQYGQQRPEFMQQYGR------PGGYPM-MHQGMMMDSNGQPIRGPNQMMMMSNGHP 326
>Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical
protein D2045.1b protein.
Length = 634
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/64 (31%), Positives = 24/64 (37%)
Frame = +1
Query: 424 PDVKPPPAPHDHRHLQHAAHGWHAPVVSPHYGAGSPVTLHGGYPMPVHQHHMLRDIQPSP 603
P PPP P +H Q HAP PH GA P + QH + P
Sbjct: 463 PGAVPPPPPPQQQHQQQQHPPHHAP---PHVGAPPPQMM-----QQQQQHIQQYMVMQGP 514
Query: 604 HPLH 615
H +H
Sbjct: 515 HQMH 518
>Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical
protein D2045.1a protein.
Length = 959
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/64 (31%), Positives = 24/64 (37%)
Frame = +1
Query: 424 PDVKPPPAPHDHRHLQHAAHGWHAPVVSPHYGAGSPVTLHGGYPMPVHQHHMLRDIQPSP 603
P PPP P +H Q HAP PH GA P + QH + P
Sbjct: 788 PGAVPPPPPPQQQHQQQQHPPHHAP---PHVGAPPPQMM-----QQQQQHIQQYMVMQGP 839
Query: 604 HPLH 615
H +H
Sbjct: 840 HQMH 843
>AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein.
Length = 959
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/64 (31%), Positives = 24/64 (37%)
Frame = +1
Query: 424 PDVKPPPAPHDHRHLQHAAHGWHAPVVSPHYGAGSPVTLHGGYPMPVHQHHMLRDIQPSP 603
P PPP P +H Q HAP PH GA P + QH + P
Sbjct: 788 PGAVPPPPPPQQQHQQQQHPPHHAP---PHVGAPPPQMM-----QQQQQHIQQYMVMQGP 839
Query: 604 HPLH 615
H +H
Sbjct: 840 HQMH 843
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/54 (31%), Positives = 20/54 (37%)
Frame = +1
Query: 457 HRHLQHAAHGWHAPVVSPHYGAGSPVTLHGGYPMPVHQHHMLRDIQPSPHPLHH 618
H H + HG HAP H+G H G H H +PH HH
Sbjct: 587 HGHHESHGHGHHAPAHHGHHGEHGVHHGHHGAGYGAHHGHHGAHHHHAPHHEHH 640
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/58 (29%), Positives = 21/58 (36%)
Frame = +1
Query: 445 APHDHRHLQHAAHGWHAPVVSPHYGAGSPVTLHGGYPMPVHQHHMLRDIQPSPHPLHH 618
AP H H + HG H+P H+G H G+ H H H HH
Sbjct: 435 APAHHGHHESHGHGHHSPAHHGHHGEHHHAPAHHGH-HGEHHHAPAHHGHHGEHGTHH 491
Score = 31.9 bits (69), Expect = 0.41
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Frame = +1
Query: 454 DHRHLQHAAH-GWHAPVVS-PHYGA-GSPVTLHGGYPMPVHQ-HHMLRDIQPSPHPLHH 618
DH H H H G H S H+G G T HG + P H HH + H HH
Sbjct: 645 DHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHGAHH 703
Score = 31.1 bits (67), Expect = 0.71
Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = +1
Query: 451 HDHRHLQHAAHGWHAP--VVSPHYGAGSPVTLHGGYPMPVHQHHMLRDIQPSPHPLHHH 621
H H H A HG H V H+GAG H G+ H HH H HHH
Sbjct: 593 HGHGHHAPAHHGHHGEHGVHHGHHGAG--YGAHHGH-HGAHHHHAPHHEHHEHHGDHHH 648
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 10/68 (14%)
Frame = +1
Query: 451 HDHRHLQHAAHGWH-----APVVSPHYGAGSPVTLHGGYPMPVHQHHMLRDIQPSP---- 603
H H H A HG H AP H+G H G+ HH SP
Sbjct: 445 HGHGHHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHG 504
Query: 604 -HPLHHHA 624
H HHHA
Sbjct: 505 HHGEHHHA 512
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = +1
Query: 442 PAPHDHRHLQHAAH-GWHAPVVSP-HYGAGSPVTLHGGYPMPVHQHHMLRDIQPSPHPLH 615
PA H H H +H H G H SP H+G H P H HH H H
Sbjct: 478 PAHHGH-HGEHGTHHGHHGSHHSPAHHGHHGE---HHHAPAH-HGHHGEHGTHHGHHGEH 532
Query: 616 HHA 624
HHA
Sbjct: 533 HHA 535
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Frame = +1
Query: 442 PAPHDHRHLQHAAH-GWHAPVVSPHYGAGSPVTLHGGYPMPVHQHHMLR-DIQPSPHPLH 615
PA H H H +H H G H H+G H P H+HH D H +H
Sbjct: 600 PAHHGH-HGEHGVHHGHHGAGYGAHHGHHGAHHHHA----PHHEHHEHHGDHHHGSHGVH 654
Query: 616 H 618
H
Sbjct: 655 H 655
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/58 (31%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Frame = +1
Query: 451 HDHRHLQHAAHGWHAPVVSPHYG-AGSPVTLHGGYPMPVHQHHM-LRDIQPSPHPLHH 618
H H H HAP H+G GS HG + H HH H +HH
Sbjct: 556 HSPAHHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHH 613
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 31.9 bits (69), Expect = 0.41
Identities = 21/73 (28%), Positives = 32/73 (43%)
Frame = +2
Query: 383 TPGRCTSITHTHINQT*SLPRLLTTTATCSMRPTAGTRPSSARITVRARPSHCMEDTQCP 562
T T+ T T QT + P TTT T + PT T P++ T + S
Sbjct: 250 TTSETTTTTPTTTTQTTTKPT--TTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTK 307
Query: 563 CTNTICSETSSPR 601
T+T + T++P+
Sbjct: 308 TTSTPTTTTTTPK 320
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +1
Query: 442 PAPHDHRHLQHAA-HGWHAPVVSPHYGAGSPVTLHGGYPMPVHQHH 576
P PH HLQ+ HG P PHY P GY Q H
Sbjct: 77 PPPHHQYHLQYPPPHGLGPPPPPPHYYTQPPPPPQSGYYHHQQQQH 122
>Z98866-11|CAB11564.2| 335|Caenorhabditis elegans Hypothetical
protein Y49E10.14 protein.
Length = 335
Score = 31.1 bits (67), Expect = 0.71
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = +1
Query: 436 PPPAPHDHRHLQHAAHGWHAPVVSPHYGAGSPVTLHGGYPMPVH---QHHMLRDIQPSPH 606
PPP + H H QH P P++ A P G P PV Q H L + QP
Sbjct: 230 PPPIAYYHHHPQHQQQ--FLPFPMPYFLAPPPQAQQGA-PFPVQYIPQQHDLMNSQPMYA 286
Query: 607 PL 612
P+
Sbjct: 287 PM 288
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 31.1 bits (67), Expect = 0.71
Identities = 27/101 (26%), Positives = 34/101 (33%), Gaps = 3/101 (2%)
Frame = +1
Query: 238 GNIGGYHAASPRSAEPA-DMKYQHPLHSGGSPSPGAPVIGNPWTSLPPADPWAMXXXXXX 414
GN GG+ + + P D Y P GG G P P PP P
Sbjct: 56 GNGGGFGGNNYNNGPPPFDGGYNRPYGGGGGGGYGRPQGYVPPPPPPPTQP-EPEPEPRP 114
Query: 415 XXXPDVKPPPAPHDHRHLQHAAHGWHA--PVVSPHYGAGSP 531
P+ +P P P Q H A P+V P+ P
Sbjct: 115 EPQPEPQPEPQPEPQPEPQPEPHPEPAPEPIVKPYNSYAQP 155
>U62896-1|AAB17868.1| 335|Caenorhabditis elegans PIE-1 protein.
Length = 335
Score = 31.1 bits (67), Expect = 0.71
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = +1
Query: 436 PPPAPHDHRHLQHAAHGWHAPVVSPHYGAGSPVTLHGGYPMPVH---QHHMLRDIQPSPH 606
PPP + H H QH P P++ A P G P PV Q H L + QP
Sbjct: 230 PPPIAYYHHHPQHQQQ--FLPFPMPYFLAPPPQAQQGA-PFPVQYIPQQHDLMNSQPMYA 286
Query: 607 PL 612
P+
Sbjct: 287 PM 288
>Z30662-4|CAA83139.3| 376|Caenorhabditis elegans Hypothetical
protein T16H12.4 protein.
Length = 376
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = -2
Query: 230 ISAGMYVVAAMAPYLRSTVDGVLPARRLSSLQLAYSFA-KTARGSRCAAVAAGATSHHRI 54
+SA M+V MA + L L L ++ +A+ S C A+ G H I
Sbjct: 205 LSAEMFVCKEMAKATKGEYSVALDPDHLQLLFSKHTLPPSSAKSSECNAIHVGFPHHELI 264
Query: 53 RQRATCAC 30
R+ C C
Sbjct: 265 TTRSFCVC 272
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
Frame = +2
Query: 368 HCHPPTPGRCTSITHTHINQT*SLPRLLTTTATCSMRPTAGTRPSSAR--ITVRARPSHC 541
H PP+ + + H+ L+TT + C P T+P S+R I + HC
Sbjct: 239 HTLPPSSAKSSECNAIHVGFPHH--ELITTRSFCVCHPD--TKPISSRGFICTQCGARHC 294
Query: 542 MEDTQCP-CTNTICSETSSPRRIR 610
+CP C T+ + R R
Sbjct: 295 SIPAECPVCKLTLVAAPQLARAFR 318
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 1.6
Identities = 26/73 (35%), Positives = 34/73 (46%)
Frame = +2
Query: 377 PPTPGRCTSITHTHINQT*SLPRLLTTTATCSMRPTAGTRPSSARITVRARPSHCMEDTQ 556
P T T +T T T + P TTT T S T+ T PS++ TV PS
Sbjct: 407 PSTSTTTTEVTSTSSTVTTTEP---TTTLTTSTASTSTTEPSTS--TVTTSPS------T 455
Query: 557 CPCTNTICSETSS 595
P T+T+ S +SS
Sbjct: 456 SPVTSTVTSSSSS 468
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 1.6
Identities = 26/73 (35%), Positives = 34/73 (46%)
Frame = +2
Query: 377 PPTPGRCTSITHTHINQT*SLPRLLTTTATCSMRPTAGTRPSSARITVRARPSHCMEDTQ 556
P T T +T T T + P TTT T S T+ T PS++ TV PS
Sbjct: 407 PSTSTTTTEVTSTSSTVTTTEP---TTTLTTSTASTSTTEPSTS--TVTTSPS------T 455
Query: 557 CPCTNTICSETSS 595
P T+T+ S +SS
Sbjct: 456 SPVTSTVTSSSSS 468
>AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical
protein Y34B4A.8 protein.
Length = 604
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/69 (30%), Positives = 31/69 (44%)
Frame = +2
Query: 380 PTPGRCTSITHTHINQT*SLPRLLTTTATCSMRPTAGTRPSSARITVRARPSHCMEDTQC 559
P+P S+T +H + P + A C+ P + RP S I V ARP+ +Q
Sbjct: 489 PSPFNGGSLTRSHTEHRPNRPPPPSFRAACADTPKS--RPISYNIAVGARPNESHSVSQP 546
Query: 560 PCTNTICSE 586
P T+ E
Sbjct: 547 PKGMTVSME 555
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/61 (36%), Positives = 23/61 (37%)
Frame = +1
Query: 301 QHPLHSGGSPSPGAPVIGNPWTSLPPADPWAMXXXXXXXXXPDVKPPPAPHDHRHLQHAA 480
QHP P PG P G P PPA +A P PPPA H QH
Sbjct: 725 QHP-----GPYPGYPGYGPPGAMRPPAG-FAPPPGAPYGYPPGA-PPPAGFHPSHPQHPQ 777
Query: 481 H 483
H
Sbjct: 778 H 778
Score = 28.7 bits (61), Expect = 3.8
Identities = 28/99 (28%), Positives = 35/99 (35%), Gaps = 4/99 (4%)
Frame = +1
Query: 271 RSAEPADMKYQHPL----HSGGSPSPGAPVIGNPWTSLPPADPWAMXXXXXXXXXPDVKP 438
R+ E AD KY + H GG P V PPA +M P++ P
Sbjct: 2 RNGEDAD-KYAASVAEVAHGGGGPKKDDQV--------PPAPDASMPTPQQQQQQPNLPP 52
Query: 439 PPAPHDHRHLQHAAHGWHAPVVSPHYGAGSPVTLHGGYP 555
P P++H QH P S G H G P
Sbjct: 53 PQQPYEHPAQQHPPQHHSVPPNSFAPPPGQHHPQHPGMP 91
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 238 GNIGGYHAASPRSAEPADMKYQHPLHSGGSPSPGAPVIGNPWTSLPP 378
G GG +S+E + + P SP G+P G+P T PP
Sbjct: 381 GPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPP 427
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 238 GNIGGYHAASPRSAEPADMKYQHPLHSGGSPSPGAPVIGNPWTSLPP 378
G GG +S+E + + P SP G+P G+P T PP
Sbjct: 402 GPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPP 448
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 238 GNIGGYHAASPRSAEPADMKYQHPLHSGGSPSPGAPVIGNPWTSLPP 378
G GG +S+E + + P SP G+P G+P T PP
Sbjct: 387 GPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPP 433
>Z93393-15|CAE54926.1| 347|Caenorhabditis elegans Hypothetical
protein Y48E1B.16 protein.
Length = 347
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +1
Query: 424 PDVKPPPAPHDHRHLQHAAHGWHAPVVSPHYGAGSPVTLHGGYPMP 561
P P P P +L + +GW+ P A +P G P P
Sbjct: 74 PAPTPQPRPPAQNNLPKSQYGWNTQAPGPRAPAPAPTRPQYGVPAP 119
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/84 (26%), Positives = 27/84 (32%)
Frame = +1
Query: 325 SPSPGAPVIGNPWTSLPPADPWAMXXXXXXXXXPDVKPPPAPHDHRHLQHAAHGWHAPVV 504
SP P G P P+D P PP PH H + P
Sbjct: 59 SPPPAPRPSGQPPGPQGPSDLPGPSGAPPGPPHPS-GPPHRPHPHPSRRPRPTRLPRPSR 117
Query: 505 SPHYGAGSPVTLHGGYPMPVHQHH 576
SPH A P G+ + +HH
Sbjct: 118 SPHSDAPEPSAATDGFELVFGKHH 141
>AC024783-3|AAL32245.1| 273|Caenorhabditis elegans Hypothetical
protein Y45G5AL.1a protein.
Length = 273
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 541 HGGYPMPVHQHHMLRDIQPSPHPLHHHAMERD 636
H G+ PVH+++ P+ +P HH M D
Sbjct: 57 HQGFVNPVHEYNYDATDGPNMYPSDHHGMHSD 88
>Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical
protein T06G6.8 protein.
Length = 417
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = +2
Query: 377 PPTPGRCTSITHTHINQT*SLPRLLTTTATCSMRPTAGTRPSSA 508
P P R S+T T T LP TTT+T P A T PS A
Sbjct: 237 PTKPSRTRSLTSTSTT-TAKLP---TTTSTTFAAPQASTEPSEA 276
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/66 (34%), Positives = 27/66 (40%)
Frame = +1
Query: 157 AGKTPSTVDLRYGAMAATTYMPAEMELGNIGGYHAASPRSAEPADMKYQHPLHSGGSPSP 336
A PS D +G A P E E G A S RS P Y P+ GG+P P
Sbjct: 513 APSPPSGPDPDFGGDTAAAG-PTEEEF--FTGESALS-RSKGPTGDGYGPPVFPGGAPPP 568
Query: 337 GAPVIG 354
P +G
Sbjct: 569 PVPAVG 574
>U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical
protein T26A8.1 protein.
Length = 708
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +2
Query: 398 TSITHTHINQT*SLPRLLTTTATC-SMRPTAGTRPSSARITVRARPSHCMEDTQ-CPCTN 571
T++ T I T S P T S T G P+S+ I P +C ED+ P T
Sbjct: 357 TTVITTTIPSTTSEPEATIDVKTRDSKEDTNGVLPTSSAIETPPYPENCPEDSLFLPGTI 416
Query: 572 TICSETSS 595
ETSS
Sbjct: 417 AASEETSS 424
>U28993-3|AAT81196.1| 635|Caenorhabditis elegans Hypothetical
protein F22D3.2b protein.
Length = 635
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 14 CCRSARTRMSLAVESGDVRWPPPLPQRSATPAQ---FSRKNKPVEGSR 148
C RS +S A + V+ PPP RS TP + + +P+ G+R
Sbjct: 136 CLRSLSCEVSAASKKNPVQPPPPPLSRSTTPRKIHPYVIHEEPLHGTR 183
>U28993-2|AAK31497.1| 720|Caenorhabditis elegans Hypothetical
protein F22D3.2a protein.
Length = 720
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 14 CCRSARTRMSLAVESGDVRWPPPLPQRSATPAQ---FSRKNKPVEGSR 148
C RS +S A + V+ PPP RS TP + + +P+ G+R
Sbjct: 136 CLRSLSCEVSAASKKNPVQPPPPPLSRSTTPRKIHPYVIHEEPLHGTR 183
>U22832-3|AAA64508.2| 359|Caenorhabditis elegans Hypothetical
protein C09F5.3 protein.
Length = 359
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/47 (27%), Positives = 18/47 (38%)
Frame = +1
Query: 490 HAPVVSPHYGAGSPVTLHGGYPMPVHQHHMLRDIQPSPHPLHHHAME 630
H+P+ P++ G P PVH L+ PH H E
Sbjct: 7 HSPITEPYFSFGERHLPFAAQPCPVHVFKTLKVEYRQPHNSSHVKQE 53
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore
complex protein protein7 protein.
Length = 1217
Score = 23.4 bits (48), Expect(2) = 5.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 157 AGKTPSTVDLRYGAMAATT 213
A TPSTV +G+ A+TT
Sbjct: 590 ASNTPSTVKFGFGSGASTT 608
Score = 23.0 bits (47), Expect(2) = 5.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 322 GSPSPGAPVIGNPWTSLPP 378
GS S AP+ G P T+ PP
Sbjct: 622 GSGSSVAPLFGAPKTTAPP 640
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +1
Query: 526 SPVTLHGGYPMPVH-QHHMLRDIQPSPHP 609
S V +H YP H QH+ L +Q PHP
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical
protein T23B5.3b protein.
Length = 540
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +1
Query: 526 SPVTLHGGYPMPVH-QHHMLRDIQPSPHP 609
S V +H YP H QH+ L +Q PHP
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -2
Query: 614 CSGCGEGWMSLSIWCWCTGIGYPPCSVTGEPAP*CGLTTGAC 489
C C +G+ +++ C G C TG C L TG C
Sbjct: 1067 CEKCADGYFNITSGDGCEDCG---CDPTGSEDVSCNLVTGQC 1105
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +1
Query: 526 SPVTLHGGYPMPVH-QHHMLRDIQPSPHP 609
S V +H YP H QH+ L +Q PHP
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Frame = +2
Query: 455 TTATCSMRPTAGTRPSSAR----ITVRARPSHCMEDTQ 556
T +T ++ T+GT PSS R IT+ PS E TQ
Sbjct: 1952 TGSTVTIGSTSGTNPSSPRSLSQITITPSPSQSTESTQ 1989
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -2
Query: 614 CSGCGEGWMSLSIWCWCTGIGYPPCSVTGEPAP*CGLTTGAC 489
C C +G+ +++ C G C TG C L TG C
Sbjct: 1067 CEKCADGYFNITSGDGCEDCG---CDPTGSEDVSCNLVTGQC 1105
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 533 SHCMEDTQCPCTNTICSETSSPRRIRCIITPWSGISPRRT 652
SH TQ P T T + T++ RR+ ++T + +PRRT
Sbjct: 276 SHTTPPTQTPPTQTPPTTTTT-RRVTVVVTSPTTTTPRRT 314
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -2
Query: 614 CSGCGEGWMSLSIWCWCTGIGYPPCSVTGEPAP*CGLTTGAC 489
C C +G+ +++ C G C TG C L TG C
Sbjct: 1067 CEKCADGYFNITSGDGCEDCG---CDPTGSEDVSCNLVTGQC 1105
>AC024783-2|AAL32246.1| 275|Caenorhabditis elegans Hypothetical
protein Y45G5AL.1b protein.
Length = 275
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +1
Query: 541 HGGYPMPVHQHHMLRDIQ--PSPHPLHHHAMERD 636
H G+ PVH+++ D P+ +P HH M D
Sbjct: 57 HQGFVNPVHEYYSNYDATDGPNMYPSDHHGMHSD 90
>Z83226-4|CAI79261.2| 206|Caenorhabditis elegans Hypothetical
protein F43D2.6 protein.
Length = 206
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/48 (29%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Frame = -2
Query: 314 CNGCWYFMSAG----SALRGDAAWYPPMLPSSISAGMYVVAAMAPYLR 183
CNGCW ++ D WYP I G V + P R
Sbjct: 112 CNGCWLHRRRNPQQYESVHNDNGWYPICCGFGIPMGTVVFSTHPPQYR 159
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 3/71 (4%)
Frame = +2
Query: 371 CHPPTPGRCTSITHTHINQT*SLPRLLTTTATCSMRPTAGTRPSSARITVRARP---SHC 541
C P +C T +Q P+ + TT P + A +P S C
Sbjct: 479 CQPACDPKCIIATIKTPSQQ---PQFVVTTTQAPPAPAPQQQQQLASCPQLCQPQCTSQC 535
Query: 542 MEDTQCPCTNT 574
++ QCPC T
Sbjct: 536 VQQQQCPCQQT 546
>Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical
protein C41G7.5b protein.
Length = 560
Score = 27.5 bits (58), Expect = 8.8
Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 8/79 (10%)
Frame = +1
Query: 430 VKPPPAPHDHRHL-QHAAHGWHAPVVSPHYGAG-SPVTLHGGYPMPVHQ----HHMLRDI 591
V PP PHD HL Q+ H P + +PV G +P +H H D
Sbjct: 454 VHPPAWPHDVYHLTQYPPTYPHPPGTVGYPDVQIAPVDYPGWHPNDIHMTQLPHGFTPDA 513
Query: 592 QP--SPHPLHHHAMERDQP 642
Q PHP H E P
Sbjct: 514 QKLVPPHPQMSHFTEYPTP 532
>Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical
protein C41G7.5a protein.
Length = 602
Score = 27.5 bits (58), Expect = 8.8
Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 8/79 (10%)
Frame = +1
Query: 430 VKPPPAPHDHRHL-QHAAHGWHAPVVSPHYGAG-SPVTLHGGYPMPVHQ----HHMLRDI 591
V PP PHD HL Q+ H P + +PV G +P +H H D
Sbjct: 496 VHPPAWPHDVYHLTQYPPTYPHPPGTVGYPDVQIAPVDYPGWHPNDIHMTQLPHGFTPDA 555
Query: 592 QP--SPHPLHHHAMERDQP 642
Q PHP H E P
Sbjct: 556 QKLVPPHPQMSHFTEYPTP 574
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 27.5 bits (58), Expect = 8.8
Identities = 27/119 (22%), Positives = 36/119 (30%), Gaps = 2/119 (1%)
Frame = +1
Query: 301 QHPLHSGGSPSPGAPVIGNPWTSLPPADPWAMXXXXXXXXXPDVKPPPAPHDHRHLQHAA 480
QHP S P P AP+ + P DP+ P P ++
Sbjct: 621 QHPAESAAPPRPVAPMEPLFKQAPPQPDPFGWDSSGHTGDAPTASEPVQELSPTPEASSS 680
Query: 481 HGWHAPVVSPHYGAGSPVTLHGGY--PMPVHQHHMLRDIQPSPHPLHHHAMERDQPEED 651
G AP P +P P R P P P + + +PEED
Sbjct: 681 TGTSAPARPPPARPEAPKKDETAVDAAAPPRPPPAARPPPPRPAPANKEKPKEPEPEED 739
>U56965-10|AAB52670.1| 1041|Caenorhabditis elegans Nicotinamide
nucleotide transhydrogenaseprotein 1 protein.
Length = 1041
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 35 RMSLAVESGDVRWPPPLPQRSATPAQFSRKNKPVEGS 145
R +L V G ++WPPP P PA + +KP E +
Sbjct: 381 RGALVVRDGQMKWPPP-PINFPPPAA-PKSDKPSENT 415
>L23647-4|AAK29991.1| 233|Caenorhabditis elegans Hypothetical
protein ZC262.2a protein.
Length = 233
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +3
Query: 138 KAREPSSRQDAVHRGSEIRRHGGDHVHARRDGARQHRRVPR 260
K RE S ++D +E RRH RRD R RR R
Sbjct: 44 KERERSPKRDRHPEKNESRRHDDRDQERRRDYGRNDRRDDR 84
>AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocarbon
receptor orthologAHR-1 protein.
Length = 602
Score = 27.5 bits (58), Expect = 8.8
Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 8/79 (10%)
Frame = +1
Query: 430 VKPPPAPHDHRHL-QHAAHGWHAPVVSPHYGAG-SPVTLHGGYPMPVHQ----HHMLRDI 591
V PP PHD HL Q+ H P + +PV G +P +H H D
Sbjct: 496 VHPPAWPHDVYHLTQYPPTYPHPPGTVGYPDVQIAPVDYPGWHPNDIHMTQLPHGFTPDA 555
Query: 592 QP--SPHPLHHHAMERDQP 642
Q PHP H E P
Sbjct: 556 QKLVPPHPQMSHFTEYPTP 574
>AC026301-5|AAK68894.1| 745|Caenorhabditis elegans Hypothetical
protein Y54F10BM.3 protein.
Length = 745
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 65 VRWPPPLPQRSATPAQFSRKNKPVE 139
V WP P P S TP S K P E
Sbjct: 150 VDWPTPAPPTSTTPPVSSTKPPPAE 174
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 27.5 bits (58), Expect = 8.8
Identities = 19/62 (30%), Positives = 22/62 (35%)
Frame = +1
Query: 265 SPRSAEPADMKYQHPLHSGGSPSPGAPVIGNPWTSLPPADPWAMXXXXXXXXXPDVKPPP 444
+P P K Q S P P P P +S+PP P A P PPP
Sbjct: 510 TPPPPAPGPHKEQRRSTSKDPPRPAPP----PVSSIPPPPPIAGLLAANGTNVPIPPPPP 565
Query: 445 AP 450
P
Sbjct: 566 PP 567
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,273,886
Number of Sequences: 27780
Number of extensions: 360153
Number of successful extensions: 1817
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1795
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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