Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_P19
(651 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0577 + 4280590-4281225,4281749-4282102,4282214-4282412,428... 39 0.004
01_06_1695 + 39251266-39252390,39252852-39252983,39253560-392537... 38 0.005
07_01_1136 + 10668637-10669665,10670259-10670282 34 0.085
06_03_0983 - 26559772-26559915,26560149-26560251,26560335-265605... 33 0.15
01_06_1694 + 39246262-39247320,39247464-39247590,39248638-392487... 31 0.60
06_02_0365 + 15190841-15190988,15191296-15191754,15192692-151927... 31 0.80
04_04_1568 - 34475707-34476822,34476894-34477083,34477330-344774... 29 4.2
09_03_0052 + 11904633-11905616,11906324-11906491,11906588-11906977 28 5.6
04_03_0305 - 14125193-14125421,14125666-14127104 28 5.6
01_01_0216 + 1843413-1843509,1844583-1844694,1844841-1844908,184... 28 7.4
08_01_0180 - 1524302-1524877,1525998-1527056 27 9.8
05_03_0076 + 8164466-8164511,8164643-8164698,8165529-8165867,816... 27 9.8
>02_01_0577 +
4280590-4281225,4281749-4282102,4282214-4282412,
4284991-4285204,4285299-4285401,4285481-4285639
Length = 554
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/109 (27%), Positives = 47/109 (43%)
Frame = +1
Query: 181 QQGETESNASVLQRSVRLAKYMRTLGLKPGDVLALGGRNHLDLYIPYYAALMNGYPITGV 360
Q GE+ + A V S R A +R +G+ GDV+ RN + + A G T
Sbjct: 48 QTGESYTYAEVESASRRAAAGLRRMGVGKGDVVMSLLRNCPEFAFSFLGAARLGAATTTA 107
Query: 361 DPLFKLHEIKSFFKLTQPKIAFCQQNQRENYLEAARELGLDTRVITFDG 507
+P + HE+ + ++ + E E A E G+ V+T DG
Sbjct: 108 NPFYTPHEVHRQAEAAGARVIVTEACAVEKVREFAAERGVP--VVTVDG 154
>01_06_1695 +
39251266-39252390,39252852-39252983,39253560-39253748,
39253887-39253954,39254080-39254182,39254387-39254509
Length = 579
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +1
Query: 250 TLGLKPGDVLALGGRNHLDLYIPYYAALMNGYPITGVDPLFKLHEIKSFFKLTQPKIAF 426
+LGL+PGDV + + LD+ + Y+A + G ++ +P E +L++P IAF
Sbjct: 106 SLGLRPGDVALVVSPSCLDVAVLYFALMSIGVVVSPANPASTADEYAHQVRLSRPAIAF 164
>07_01_1136 + 10668637-10669665,10670259-10670282
Length = 350
Score = 34.3 bits (75), Expect = 0.085
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 187 GETESNASVLQRSVRLAKYMRT-LGLKPGDVLALGGRNHLDLYIPYYAALMNGYPITGVD 363
GE S + L R LA +R+ +GL+ GDV + LD+ + Y+A L G ++ +
Sbjct: 70 GEAVSFQAFLSRVRALAGALRSRVGLRGGDVAFVLAPAGLDVPVLYFALLSIGAVVSPAN 129
Query: 364 PLFKLHEIKSFFKLTQPKIAF 426
P E+ L+ +AF
Sbjct: 130 PALTPAEVSRLVSLSGASVAF 150
>06_03_0983 -
26559772-26559915,26560149-26560251,26560335-26560548,
26563352-26563550,26564509-26564862,26565430-26566086
Length = 556
Score = 33.5 bits (73), Expect = 0.15
Identities = 29/110 (26%), Positives = 43/110 (39%)
Frame = +1
Query: 181 QQGETESNASVLQRSVRLAKYMRTLGLKPGDVLALGGRNHLDLYIPYYAALMNGYPITGV 360
Q G S V + S R A +R LG+ GDV+ RN + + A G T
Sbjct: 52 QTGAVYSYGEVEELSRRAAAGLRRLGVGKGDVVMSLLRNCPEFAFTFLGAARLGAATTTA 111
Query: 361 DPLFKLHEIKSFFKLTQPKIAFCQQNQRENYLEAARELGLDTRVITFDGD 510
+P + HEI ++ + E A + G+ V+ DGD
Sbjct: 112 NPFYTPHEIHRQASAAGARVIVTEACAVEKVRGFAADRGIP--VVAVDGD 159
>01_06_1694 +
39246262-39247320,39247464-39247590,39248638-39248783,
39248898-39248965,39249055-39249157,39249616-39249741
Length = 542
Score = 31.5 bits (68), Expect = 0.60
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +1
Query: 250 TLGLKPGDVLALGGRNHLDLYIPYYAALMNGYPITGVDPLFKLHEIKSFFKLTQPKIAF 426
+LGL+PGDV + + L++ + +A + G ++ +P+ E L++P +AF
Sbjct: 93 SLGLRPGDVALVVAPSRLEVPVLDFALMSIGAVVSPANPVSTPEEYAHQVALSRPVVAF 151
>06_02_0365 +
15190841-15190988,15191296-15191754,15192692-15192782,
15192902-15193003,15193126-15193228,15193548-15193685,
15193912-15193974,15195042-15195124,15196312-15196411,
15196640-15196717,15196834-15196941,15197987-15198067,
15200179-15200220,15200221-15200283,15200426-15200482
Length = 571
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 212 YYSGLCG*PSTCGRSVLSRVMYWHWGEETTW 304
YY G TC + L V YW++GE W
Sbjct: 81 YYGARRGCGETCSPAALDAVRYWYYGEGRGW 111
>04_04_1568 - 34475707-34476822,34476894-34477083,34477330-34477464,
34477571-34477668,34477789-34477979,34478784-34479286,
34480169-34481568,34481655-34481855
Length = 1277
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 299 WFLPPSASTSPGLRPSVRMYLANRTDRCSTDAFDSVSP 186
W LP S G++P + M +RT DAF + P
Sbjct: 1238 WTLPQSVLALAGVKPPICMKFLSRTTNIKVDAFIAKLP 1275
>09_03_0052 + 11904633-11905616,11906324-11906491,11906588-11906977
Length = 513
Score = 28.3 bits (60), Expect = 5.6
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = +1
Query: 217 QRSVRLAKYMR--TLGLKPGDVLALGGRNHLDLYIPYYAALMNGYPITGVDPLFKLHEIK 390
Q+ VR++K MR T LKPG + +GG LD+ + + Y PL LH K
Sbjct: 311 QKLVRVSKEMRPRTYRLKPGQSVHIGGLVRLDI---EELTVGSVYVTVWASPLVPLHMGK 367
Query: 391 SFFKLTQPKIAFCQQNQRENYLEAARELG 477
+ K F Q Q + ELG
Sbjct: 368 TENAAAMVKDHFGLQLQPPIGQQRVNELG 396
>04_03_0305 - 14125193-14125421,14125666-14127104
Length = 555
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 187 GETESNASVLQRSVRLAKYMRTLGLKPGDVLALGGRNHLDLYIPYYAALMN-GYPITGVD 363
G + + V + + R A+ +R++G++ G V+ + N L +Y +M+ G +GV+
Sbjct: 59 GRSYTYGEVARDTARFARALRSVGVRKGHVVVVALPN-LAVYPVVSLGIMSAGAVFSGVN 117
Query: 364 PLFKLHEIKSFFKLTQPKIAFCQQ 435
P EIK + ++ K+ +
Sbjct: 118 PRALAAEIKKQVEDSEAKLVVANE 141
>01_01_0216 +
1843413-1843509,1844583-1844694,1844841-1844908,
1845165-1845297,1845404-1845503,1845562-1845722,
1846095-1846188,1846273-1846426,1846597-1846743,
1846819-1846892,1846985-1847073,1847161-1847275,
1847569-1847751
Length = 508
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 205 ASVLQRSVRLAKYMRTLGLKPGDVL-ALGGRNHLDLYIPYYAALMNGYPITG 357
+ VL+ + +L+ L + P ++ ALG N L + I AAL+ G P+ G
Sbjct: 169 SEVLEHAQQLSYLRLRLQISPTEIRGALGSVNQLFICIGILAALVAGLPLAG 220
>08_01_0180 - 1524302-1524877,1525998-1527056
Length = 544
Score = 27.5 bits (58), Expect = 9.8
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Frame = +1
Query: 202 NASVLQRSVRLAKYMRTLGLKPGDVLALG-GRNHLDLYIPYYAALMNGY--PITGVDPLF 372
+A L + A + R L P + LG G + ++ P + L G P+TGVD F
Sbjct: 58 DAWFLSPRISTALHERLATLLPDRSVCLGSGHGWVAVHDPIFYELQFGLVDPLTGVDIPF 117
Query: 373 KLHEIKSFFKLTQPKIAFCQQNQRENYLEAARELGLDTRVITF 501
+ KL K+ F ++ AA + RVIT+
Sbjct: 118 SSFPHFAEHKLRVSKVVFAPHPTPTDFTAAAITGHDEGRVITY 160
>05_03_0076 +
8164466-8164511,8164643-8164698,8165529-8165867,
8165938-8166012,8166674-8166846,8168697-8168795,
8169002-8169161,8169321-8169464,8169551-8169723,
8169796-8169991,8170061-8170258,8170864-8171016,
8171838-8171959,8172037-8172136,8172221-8172316,
8172400-8172530,8173717-8173819,8174373-8174555,
8174632-8174724,8174818-8174853,8175672-8175773,
8176310-8176472,8176557-8176678,8176994-8177158,
8177667-8177849,8178679-8178831,8179136-8179288,
8179373-8179444,8179530-8179664,8179739-8179800,
8179999-8180096,8180628-8180737,8180832-8181005,
8181092-8181157,8181847-8181915,8181989-8182099,
8182418-8182558,8182638-8182766,8182864-8183029,
8183174-8183388,8184883-8185089,8185501-8185572,
8185897-8186010,8186090-8186281,8186489-8186569,
8186654-8186728,8186812-8186878,8187292-8187452,
8187943-8188116,8188209-8188337,8188421-8188504,
8188589-8188650,8188728-8188800,8189008-8189142,
8189790-8189960,8190054-8190319,8190440-8190458
Length = 2448
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -2
Query: 260 RPSVRMYLANRTDRCSTDAFDSVSPCCCVYLAHRIRSSS 144
R SV +YL + + CST + + CCC +AH + +SS
Sbjct: 496 RESVILYLED--EDCSTRK--AAATCCCKLVAHSLSASS 530
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,514,509
Number of Sequences: 37544
Number of extensions: 312838
Number of successful extensions: 837
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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