Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_P19
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81071-2|CAB03012.1|  618|Caenorhabditis elegans Hypothetical pr...    38   0.006
Z81027-1|CAB02686.1|  566|Caenorhabditis elegans Hypothetical pr...    33   0.18 
Z79597-2|CAB01860.2|  611|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AL132841-7|CAB61033.1|  611|Caenorhabditis elegans Hypothetical ...    29   3.8  
U58758-13|AAB93427.1|  565|Caenorhabditis elegans Hypothetical p...    28   5.0  
Z73102-17|CAA97418.2|  375|Caenorhabditis elegans Hypothetical p...    27   8.7  

>Z81071-2|CAB03012.1|  618|Caenorhabditis elegans Hypothetical
           protein F28F8.2 protein.
          Length = 618

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
 Frame = +1

Query: 229 RLAKYMRTLGLKPGDVLALGGRNHLDLYIPYYAALMNGYPITGVDPLFKLHEIKSFFKLT 408
           ++A  + TLGL+ GD + + G N+ +  +  YA    G     V+P +   E++   + T
Sbjct: 98  QMAASLYTLGLEKGDRVGVWGPNYYEWVVLQYACAFAGVIQVNVNPHYLHEELRFVMRKT 157

Query: 409 QPKIAFC-QQNQRENYLEAARE 471
             K+ F  ++++  NY+    E
Sbjct: 158 GMKVLFAPKRHKHSNYVHTMLE 179


>Z81027-1|CAB02686.1|  566|Caenorhabditis elegans Hypothetical
           protein AH10.1 protein.
          Length = 566

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 20/70 (28%), Positives = 33/70 (47%)
 Frame = +1

Query: 232 LAKYMRTLGLKPGDVLALGGRNHLDLYIPYYAALMNGYPITGVDPLFKLHEIKSFFKLTQ 411
           LA  +  LG KPGDV A    N  +  I   A +  G  ++    +F  +E++  FK + 
Sbjct: 60  LATALVKLGFKPGDVAAQAFPNCPEFLIAMLAVMKCGGAMSNASAIFTDYELQLQFKDSN 119

Query: 412 PKIAFCQQNQ 441
             I F  +++
Sbjct: 120 TSIVFTDEDR 129


>Z79597-2|CAB01860.2|  611|Caenorhabditis elegans Hypothetical
           protein C33A11.1 protein.
          Length = 611

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 187 GETESNASVLQRSVRLAKYMRTLGLKP 267
           GET    +VLQRS+ + +Y+  LG  P
Sbjct: 418 GETPLYVAVLQRSIEVVEYLLELGASP 444


>AL132841-7|CAB61033.1|  611|Caenorhabditis elegans Hypothetical
           protein C33A11.1 protein.
          Length = 611

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 187 GETESNASVLQRSVRLAKYMRTLGLKP 267
           GET    +VLQRS+ + +Y+  LG  P
Sbjct: 418 GETPLYVAVLQRSIEVVEYLLELGASP 444


>U58758-13|AAB93427.1|  565|Caenorhabditis elegans Hypothetical
           protein ZK1127.2 protein.
          Length = 565

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/70 (24%), Positives = 32/70 (45%)
 Frame = +1

Query: 232 LAKYMRTLGLKPGDVLALGGRNHLDLYIPYYAALMNGYPITGVDPLFKLHEIKSFFKLTQ 411
           LA  +  LG KPGDV +    N  +  +   A +  G  ++    +F  +E++  F  + 
Sbjct: 60  LATALVKLGFKPGDVASQAFPNCPEFLVAMLAVMKCGGAMSNASAIFTDYELQLQFCDSN 119

Query: 412 PKIAFCQQNQ 441
             I F  +++
Sbjct: 120 TSIVFTDEDR 129


>Z73102-17|CAA97418.2|  375|Caenorhabditis elegans Hypothetical
           protein B0035.16 protein.
          Length = 375

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
 Frame = +1

Query: 202 NASVLQRSVRLAKYMRTLGLKPGDVLALGGRNHLDLYIPYYAALMNGYP--ITGVDPLFK 375
           N   L+    L  ++  +    GD++A  G +H DLY   +  L+N +P  I   DP  +
Sbjct: 252 NGKYLEARSHLGFFVSHIHSDTGDIIACEGSHHPDLYASRF--LIN-HPKWIRTFDPFNR 308

Query: 376 LHEIKSFFKL--TQPKIAFCQQNQRENYLEAARELGL 480
           +       ++  T P I  C   ++E +L     L L
Sbjct: 309 ISSNNFLCRIQRTHPPIP-CVAEKQEQFLSVIPRLAL 344


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,096,284
Number of Sequences: 27780
Number of extensions: 272827
Number of successful extensions: 685
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)