Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_P14
(656 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC646.07c |||enoyl reductase|Schizosaccharomyces pombe|chr 2||... 61 2e-10
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 34 0.021
SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit Ssr1|Schizosa... 30 0.26
SPCC338.04 |cid2||caffeine induced death protein Cid2|Schizosacc... 29 0.59
SPCC1919.07 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 29 0.78
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 28 1.0
SPBC428.18 |cdt1||replication licensing factor Cdt1|Schizosaccha... 28 1.4
SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit S5|S... 27 1.8
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 3.1
SPBC365.05c |slu7||splicing factor Slu7|Schizosaccharomyces pomb... 26 4.2
SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|c... 26 4.2
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 25 7.3
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 25 7.3
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 25 9.6
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 25 9.6
>SPBC646.07c |||enoyl reductase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 295
Score = 60.9 bits (141), Expect = 2e-10
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +2
Query: 257 AKGKTLKDEDTLNSLNIQDGSKLFLKDLGPQVSWRNVFLAEYAGPLFVYL-WVYQRPWIY 433
A G TL TL + G+ +++KDLGPQ+ WR VF+ EY GPL ++L ++ WIY
Sbjct: 50 ADGTTLLPNTTLRKYGVGPGATIWVKDLGPQIGWRTVFMIEYLGPLVIHLFFILNYKWIY 109
Score = 48.0 bits (109), Expect = 1e-06
Identities = 18/35 (51%), Positives = 28/35 (80%)
Frame = +1
Query: 505 KXWFETLFIHRFSHGTMPLKNLFRNCAYYWVVXPL 609
K +E++F+HRFS TMPL+N+F+NCA+Y ++ L
Sbjct: 132 KREYESIFVHRFSLATMPLRNIFKNCAHYHLLSGL 166
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 33.9 bits (74), Expect = 0.021
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 155 IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGSKLFL- 331
+ V ESS+ +KE I + +RQ +L G+ LKDE++L + IQDG + L
Sbjct: 18 VTVDSESSVLALKEAIAPVA--DIEKERQ--RLIYAGRVLKDEESLKTYKIQDGHSIHLV 73
Query: 332 KDLG 343
K LG
Sbjct: 74 KTLG 77
>SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit
Ssr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 30.3 bits (65), Expect = 0.26
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +2
Query: 119 ILSVSS--AKPLGKIHVTGESSIKNVKEKIQQSVKKSLYP--DRQALKLEAKGKTLKDED 286
ILSV S AK + T +SS K +E+ + +S+YP + ++ +E GK+L+D D
Sbjct: 362 ILSVVSFLAKMVPPSSFTQKSSAK--EEESDKVKGESVYPKPESESYDVEMNGKSLEDSD 419
Query: 287 TLNSLNIQDGSK 322
+L+ L + + K
Sbjct: 420 SLSELYLTNEEK 431
>SPCC338.04 |cid2||caffeine induced death protein
Cid2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 167
Score = 29.1 bits (62), Expect = 0.59
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Frame = +2
Query: 122 LSVSSAK---PLGKIHVTGESSIKNVKEKI 202
LS++SAK P GK+H T E +NVK+K+
Sbjct: 31 LSLNSAKWEYPEGKVHETQEERCQNVKKKL 60
>SPCC1919.07 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 206
Score = 28.7 bits (61), Expect = 0.78
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 140 KPLGKIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDED 286
KP K E KN E + + YP ++LK G T++DE+
Sbjct: 27 KPRKKNLGNNEWRFKNAGEYFDEDNNEEEYPSLESLKTVGNGDTIQDEE 75
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 28.3 bits (60), Expect = 1.0
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +2
Query: 95 DKHNMEIEILSVSSAKPLGKIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTL 274
+K N+ I+ L+ + K L K V ESS+K+ ++ Q +K+ + + E +TL
Sbjct: 495 EKANIVIDELNSAKLK-LSK-QVEEESSMKDDLTEMNQRLKEQIESYENEVNSEITSRTL 552
Query: 275 KDEDTLNS 298
K+ +TL +
Sbjct: 553 KEFETLKT 560
>SPBC428.18 |cdt1||replication licensing factor
Cdt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 444
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 176 SIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSL-NIQ 310
S+ + +Q S+ SL PD+ A +E K L T+N L NIQ
Sbjct: 365 SMSEIVTSMQMSISSSLSPDQCAKAIELLSKALPAWCTINLLGNIQ 410
>SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 182 KNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGSKLFLKDLGPQVS 355
K+V+E + K+ + E++GKT + L+ +++ SKLF D+ VS
Sbjct: 48 KSVEESSKNETKEQFNSSSIPRESESEGKTASNTSPLSPKKVENLSKLF-NDINEDVS 104
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.6 bits (56), Expect = 3.1
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = +2
Query: 125 SVSSAKPLGKIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLN 304
+V L K+H S ++N+K ++Q++ K+ + D ++ T + LN
Sbjct: 1479 AVEKLGALQKLHSESLSLMENIKSQLQEA-KEKIQVDESTIQELDHEITASKNNYEGKLN 1537
Query: 305 IQDGSKLFLKDLGPQVSWRNVFLAE 379
+D ++DL + N LAE
Sbjct: 1538 DKDS---IIRDLSENIEQLNNLLAE 1559
>SPBC365.05c |slu7||splicing factor Slu7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 26.2 bits (55), Expect = 4.2
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +2
Query: 173 SSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGSKLFLKDLG 343
+SI ++++ V L D + L+ E K ++++DE + ++ G F+K G
Sbjct: 214 ASITTPSLRMREDVVAYLRADNKNLQYEPKSRSMRDETGYHMVDDSSGGAGFVKASG 270
>SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1316
Score = 26.2 bits (55), Expect = 4.2
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 404 LWVYQRPWIYMVHKRQV 454
LW+ +RPW+Y H Q+
Sbjct: 926 LWLKERPWVYAHHHVQL 942
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 25.4 bits (53), Expect = 7.3
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Frame = +2
Query: 122 LSVSSAKPLGKIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSL 301
L S+ + L +HV E + + +++ VK ++P+ + L++E + + + T+ +
Sbjct: 326 LKSSADEFLDALHVVDEYQLLLLGKQVAMEVKHLMFPNDKPLEMEFPSSS-QPQQTVPTN 384
Query: 302 NIQDGSKLFLKDLGPQVSWRNVFLAEYAGPL--FVYLWVYQRPWIYMVHKRQVLSSSYSC 475
N S LK++ + L Y+ L FV LW+ R R S+ C
Sbjct: 385 N----SLFLLKNIPSFGGLHHCILGRYSISLDDFV-LWLLDRAQRLQQAVRISHPSTTFC 439
Query: 476 SNM 484
SN+
Sbjct: 440 SNV 442
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 191 KEKIQQSVKKSLYPDRQALK-LEAKGKTLKDEDTLNS 298
KEK Q KKSL D Q+L+ LE + +++ NS
Sbjct: 767 KEKSQNHEKKSLNSDNQSLRPLENENQSVSSTQGSNS 803
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 25.0 bits (52), Expect = 9.6
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = +2
Query: 98 KHNMEIEILSVSSAKPLGKI-HVTGESSIKNVKEKIQQSVKKSL-----YPDRQALKLEA 259
+ ++E++I+ K K+ GESS K KEK + KKS D ++ K +
Sbjct: 442 QEDVEMDIVIEKKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSEESEDGESPKKKK 501
Query: 260 KGKTLKD 280
K K KD
Sbjct: 502 KSKKSKD 508
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = +2
Query: 533 IAFHMVRCH*RTCSETVHIIGWFXLYVAYHVNH--PLY 640
IAF +V C T+ GW+ Y NH P Y
Sbjct: 1168 IAFFLVEAVINCCFATLFFFGWYYPSGFYEFNHNIPFY 1205
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,729,356
Number of Sequences: 5004
Number of extensions: 55053
Number of successful extensions: 156
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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