Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_P02
         (513 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q01XW6 Cluster: Putative uncharacterized protein precur...    33   2.9  
UniRef50_O83968 Cluster: Uncharacterized protein TP_1003; n=1; T...    33   2.9  
UniRef50_Q5RLL0 Cluster: OrfT; n=16; Gammaproteobacteria|Rep: Or...    33   3.8  
UniRef50_A2EN31 Cluster: Viral A-type inclusion protein, putativ...    33   3.8  
UniRef50_A7NL29 Cluster: ABC transporter related; n=1; Roseiflex...    32   6.7  

>UniRef50_Q01XW6 Cluster: Putative uncharacterized protein
           precursor; n=1; Solibacter usitatus Ellin6076|Rep:
           Putative uncharacterized protein precursor - Solibacter
           usitatus (strain Ellin6076)
          Length = 543

 Score = 33.5 bits (73), Expect = 2.9
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -1

Query: 510 PRVPALXWRLEGFPETIRVSIXRCHSVPEADPRHSDTTVWWGETP 376
           P  PA+   + G P T    I R +S+   DP  + T++WWG  P
Sbjct: 315 PNKPAMVGFVTGGPSTTARGIYRLYSL---DPTSAHTSLWWGANP 356


>UniRef50_O83968 Cluster: Uncharacterized protein TP_1003; n=1;
           Treponema pallidum|Rep: Uncharacterized protein TP_1003
           - Treponema pallidum
          Length = 345

 Score = 33.5 bits (73), Expect = 2.9
 Identities = 21/59 (35%), Positives = 32/59 (54%)
 Frame = +2

Query: 194 FVLFTLILIVDDYVTSHRIHAPKYRKHRATPDVELRFAPEPYSRKMELNSSGEDTLVKV 370
           FVL T+  ++  Y T H IHA  YR  ++T    L   P   S  + ++S+GE+  +KV
Sbjct: 184 FVLCTVAFLISRYTTIHTIHA--YRPSQSTQGAILLAQPISESGSI-IDSTGEEKTLKV 239


>UniRef50_Q5RLL0 Cluster: OrfT; n=16; Gammaproteobacteria|Rep: OrfT
           - Pseudomonas fluorescens
          Length = 341

 Score = 33.1 bits (72), Expect = 3.8
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = -1

Query: 390 WGETPPATFTSVSSPELFNSIFRLYGSG 307
           WG  PPAT T+ SS   F   FR  G G
Sbjct: 28  WGAVPPATLTAASSDASFRRYFRWEGEG 55


>UniRef50_A2EN31 Cluster: Viral A-type inclusion protein, putative;
            n=1; Trichomonas vaginalis G3|Rep: Viral A-type inclusion
            protein, putative - Trichomonas vaginalis G3
          Length = 5296

 Score = 33.1 bits (72), Expect = 3.8
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
 Frame = -1

Query: 216  KMSVNKTKRITAIL--ANWHKII*IFEL-RMLYLASVHFLLLLEDEWKNHNKNLWKHA 52
            K S+NKT    ++   A+W+K++ ++ L R     S+HFL +      +H+ N WKH+
Sbjct: 5228 KKSLNKTLMTCSMKSRADWNKVLKLWSLSRNTRNLSMHFLKVSAIRHLDHSPNSWKHS 5285


>UniRef50_A7NL29 Cluster: ABC transporter related; n=1; Roseiflexus
           castenholzii DSM 13941|Rep: ABC transporter related -
           Roseiflexus castenholzii DSM 13941
          Length = 504

 Score = 32.3 bits (70), Expect = 6.7
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 275 RATPDVELRFAPEPYSRKMELNSSGEDTLVKVAGGV 382
           RA  DV + FAP      +  N +G+ TL+K+ GG+
Sbjct: 15  RALSDVSIDFAPGKIHALVGENGAGKSTLIKIIGGI 50


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,682,832
Number of Sequences: 1657284
Number of extensions: 11366058
Number of successful extensions: 28315
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28312
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)