Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_O18
(308 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_02_0040 + 4482853-4482988,4483111-4483224,4485372-4485514 79 9e-16
03_02_0370 + 7853646-7853772,7854508-7854621,7855152-7855294 78 2e-15
06_01_0239 - 1819316-1819458,1820578-1820691,1820794-1820923 75 2e-14
03_02_0020 - 5045900-5046211,5046233-5046290,5046604-5047242,504... 34 0.026
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 29 0.98
03_06_0314 - 33077621-33077869,33078218-33078280,33079392-330794... 29 0.98
01_05_0426 + 22042215-22042595,22044846-22045688 28 1.7
02_01_0686 + 5112712-5112942 27 3.0
05_05_0026 + 21645845-21647404 27 4.0
01_06_1409 - 37111954-37112061,37112295-37112330,37112434-371124... 27 4.0
06_02_0345 + 14833838-14833997,14834095-14834552,14834633-148348... 26 5.2
05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663 26 5.2
12_02_0964 - 24860373-24860381,24860427-24860768,24861436-248615... 26 6.9
09_06_0343 - 22415525-22415833,22415999-22416134,22416593-224166... 26 6.9
03_06_0569 + 34789286-34790052,34791216-34791512,34791604-347918... 26 6.9
02_05_0398 - 28644632-28644889,28644997-28645032,28645101-286453... 26 6.9
04_04_1654 - 35075409-35075926,35076396-35078694 25 9.2
>10_02_0040 + 4482853-4482988,4483111-4483224,4485372-4485514
Length = 130
Score = 78.6 bits (185), Expect = 9e-16
Identities = 36/67 (53%), Positives = 50/67 (74%)
Frame = +1
Query: 106 AAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 285
A + G + +A ++RIRITL+S+NV++LEKVCADL+ GAK ++LRVKGPVR+P
Sbjct: 9 AGGAMKGGKLGMEEARELQLNRIRITLSSKNVKNLEKVCADLVKGAKDKQLRVKGPVRIP 68
Query: 286 TXILRIT 306
T +L IT
Sbjct: 69 TKVLHIT 75
>03_02_0370 + 7853646-7853772,7854508-7854621,7855152-7855294
Length = 127
Score = 77.8 bits (183), Expect = 2e-15
Identities = 40/72 (55%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Frame = +1
Query: 103 MAAAVV----SGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKG 270
MAAA V G + +A ++RIRITL+S+NV++LEKVCADL+ GAK ++LRVKG
Sbjct: 1 MAAAAVYGGMKGGKLGVEEAHELQLNRIRITLSSKNVKNLEKVCADLVKGAKDKQLRVKG 60
Query: 271 PVRMPTXILRIT 306
PVR+PT +L IT
Sbjct: 61 PVRIPTKVLHIT 72
>06_01_0239 - 1819316-1819458,1820578-1820691,1820794-1820923
Length = 128
Score = 74.5 bits (175), Expect = 2e-14
Identities = 38/67 (56%), Positives = 49/67 (73%)
Frame = +1
Query: 106 AAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 285
A + SGK + EV HRIRITL+S++V++LEKVC DL+ GAK + L+VKGPVRMP
Sbjct: 9 APPMKSGKIGFESSQEVQ--HRIRITLSSKSVKNLEKVCGDLVKGAKDKSLKVKGPVRMP 66
Query: 286 TXILRIT 306
T +L IT
Sbjct: 67 TKVLHIT 73
>03_02_0020 -
5045900-5046211,5046233-5046290,5046604-5047242,
5048475-5048515,5048672-5048728,5048952-5049140
Length = 431
Score = 33.9 bits (74), Expect = 0.026
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 154 VSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPT 288
++P +IRI L S V +E C +I AK + GPV +PT
Sbjct: 329 LAPKQKIRIKLRSYWVPLIEDSCKKIIEAAKTTNAKTMGPVPLPT 373
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 28.7 bits (61), Expect = 0.98
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 105 GSRCSVRQRHRETPGRGLPYSP 170
G CS R+RHR G LP++P
Sbjct: 73 GVTCSRRRRHRRVTGLSLPHTP 94
>03_06_0314 -
33077621-33077869,33078218-33078280,33079392-33079449,
33079534-33079688,33079797-33080106,33080634-33080890,
33081280-33081359,33083888-33083948
Length = 410
Score = 28.7 bits (61), Expect = 0.98
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 198 CALTREGLC*PNQWSQETEAACKGPSP 278
C L EGL ++W++ A +GPSP
Sbjct: 155 CRLAAEGLVTASKWARPGRAGTRGPSP 181
>01_05_0426 + 22042215-22042595,22044846-22045688
Length = 407
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +3
Query: 177 DHSYFSQCALTREGLC*PNQWSQETEAACKGPSPHANQXPAYH 305
DH A TR G+ E P PH PAYH
Sbjct: 13 DHGVRQVWADTRHGIAGGEHERVHAETFALAPQPHKQHRPAYH 55
>02_01_0686 + 5112712-5112942
Length = 76
Score = 27.1 bits (57), Expect = 3.0
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 74 FISAGIQQA-TWQPL*CQAKTSRNPRQRSPLFTASGSLLLLAMCAHSRR 217
FI A + + W+ + K +RN R+R LF L LA A RR
Sbjct: 6 FIGAALIEVWRWEERMVEKKRTRNTRERGGLFPRKLQLRALAAIARFRR 54
>05_05_0026 + 21645845-21647404
Length = 519
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 251 CFLAPLIRSAQTFSSERTL 195
C L PL+RSA ++ SER L
Sbjct: 171 CRLIPLLRSASSYGSERLL 189
>01_06_1409 -
37111954-37112061,37112295-37112330,37112434-37112498,
37112610-37112688,37112967-37113041,37113623-37114147
Length = 295
Score = 26.6 bits (56), Expect = 4.0
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 52 TIFD*KVVYLGRNSTSNMAAAVVSGKDIEK-PQAEVSPIHRIRITLTSRNVRSLEKVCAD 228
+I + K V L + N+ SG +I+ + V+ IHR R+TL +++ S
Sbjct: 215 SILEAKDVLLHAERSWNITLPGFSGDEIKLYKKPHVNDIHRERLTLIKKSMASESNAKGS 274
Query: 229 LINGAKKQKLRVKGP 273
A QK + P
Sbjct: 275 AAQAAANQKNQTPKP 289
>06_02_0345 +
14833838-14833997,14834095-14834552,14834633-14834870,
14834974-14835431,14836554-14836955
Length = 571
Score = 26.2 bits (55), Expect = 5.2
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 171 HQDHSYFSQCALTREGLC*PNQWSQETEAACKGPSP 278
H S +CAL R+G +W ET C G P
Sbjct: 11 HHLQSTLFECALLRDGRAESFEWLFETFKNCMGNCP 46
>05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663
Length = 741
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 99 QHGSRCSVRQRHRETPGRGLPYSPHQDHSYFSQCALTR 212
+H SRCS R R R T QD + + CA T+
Sbjct: 676 RHSSRCSCRYRSRRTRSPSSLTPRDQDGTGDAGCATTK 713
>12_02_0964 -
24860373-24860381,24860427-24860768,24861436-24861583,
24862070-24862089
Length = 172
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 78 SRPEFNKQHGSRCSVRQRHRETPGRGLPYSPHQDH 182
+RPE GSR + R+ R G P PH H
Sbjct: 90 ARPEAAAGGGSRGTARRILRSASGSATPLPPHHLH 124
>09_06_0343 -
22415525-22415833,22415999-22416134,22416593-22416697,
22417696-22418291
Length = 381
Score = 25.8 bits (54), Expect = 6.9
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 108 SRCSVRQR-HRETPGRGLPYSPHQDHSYFSQCALTREGL 221
+RC VR+R + +T GR PY + DH S L GL
Sbjct: 69 ARCVVRRRTYADTRGRVTPYLLYLDHPN-SDIVLALRGL 106
>03_06_0569 +
34789286-34790052,34791216-34791512,34791604-34791835,
34792334-34792391,34792800-34792931,34793108-34793246,
34793460-34793622,34793693-34793734
Length = 609
Score = 25.8 bits (54), Expect = 6.9
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 136 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKG 270
EK EVS I R+ ++ + +L +C D+I+ + LR KG
Sbjct: 547 EKSDVEVSGIDRLIRSIPAGERAALGFMCKDIIDTGRLLWLREKG 591
>02_05_0398 -
28644632-28644889,28644997-28645032,28645101-28645364,
28645439-28645522,28645718-28645798,28645888-28645965,
28646571-28646672,28646754-28646849,28646955-28647161,
28647246-28647493,28647577-28647773,28647997-28648112
Length = 588
Score = 25.8 bits (54), Expect = 6.9
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 82 GRNSTSNMAAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLI 234
G ++T + AVV + K +V IT T RN L++ C+D I
Sbjct: 272 GTHTTGSRGFAVVLDQTELKENRKVGRAELYVITHTKRNGEPLDEYCSDKI 322
>04_04_1654 - 35075409-35075926,35076396-35078694
Length = 938
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +1
Query: 91 STSNMAAAVVSGKDIEKPQAEVSPIHRIR 177
+ M AAV+S K +++ QAE++ + ++R
Sbjct: 615 AVKRMEAAVISNKALDEFQAEITILTKVR 643
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,212,521
Number of Sequences: 37544
Number of extensions: 155997
Number of successful extensions: 448
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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