Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_O18
         (308 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L06498-1|AAA60286.1|  119|Homo sapiens ribosomal protein S20 pro...    86   2e-17
BC087850-1|AAH87850.1|  119|Homo sapiens ribosomal protein S20 p...    86   2e-17
BC007507-1|AAH07507.1|  119|Homo sapiens ribosomal protein S20 p...    86   2e-17
AB061842-1|BAB79480.1|  119|Homo sapiens ribosomal protein S20 p...    86   2e-17
D25538-1|BAA05021.2| 1088|Homo sapiens KIAA0037 protein.               30   1.2  
BC126271-1|AAI26272.1| 1080|Homo sapiens adenylate cyclase 7 pro...    30   1.2  
AB029009-1|BAA83038.1|  902|Homo sapiens KIAA1086 protein protein.     29   3.7  
AB007156-1|BAA25820.1|   60|Homo sapiens ribosomal protein S20 p...    28   4.8  

>L06498-1|AAA60286.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score = 85.8 bits (203), Expect = 2e-17
 Identities = 44/61 (72%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
 Frame = +1

Query: 127 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTXILRI 303
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPT  LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 304 T 306
           T
Sbjct: 64  T 64


>BC087850-1|AAH87850.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score = 85.8 bits (203), Expect = 2e-17
 Identities = 44/61 (72%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
 Frame = +1

Query: 127 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTXILRI 303
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPT  LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 304 T 306
           T
Sbjct: 64  T 64


>BC007507-1|AAH07507.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score = 85.8 bits (203), Expect = 2e-17
 Identities = 44/61 (72%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
 Frame = +1

Query: 127 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTXILRI 303
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPT  LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 304 T 306
           T
Sbjct: 64  T 64


>AB061842-1|BAB79480.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score = 85.8 bits (203), Expect = 2e-17
 Identities = 44/61 (72%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
 Frame = +1

Query: 127 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTXILRI 303
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPT  LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 304 T 306
           T
Sbjct: 64  T 64


>D25538-1|BAA05021.2| 1088|Homo sapiens KIAA0037 protein.
          Length = 1088

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +3

Query: 36  PXSALNNF*LKSCLSRPEFNKQHGSRC-SVRQRHRETPGRGL-PYSPHQDHSYFSQCALT 209
           P + LN+   +  +S  E +  +G R  SV QRHR TP R + P    +D SY  +    
Sbjct: 504 PFAHLNH---RESVSSGETHVPNGRRPKSVPQRHRRTPDRSMSPKGRSEDDSYDDEMLSA 560

Query: 210 REGL 221
            EGL
Sbjct: 561 IEGL 564


>BC126271-1|AAI26272.1| 1080|Homo sapiens adenylate cyclase 7
           protein.
          Length = 1080

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +3

Query: 36  PXSALNNF*LKSCLSRPEFNKQHGSRC-SVRQRHRETPGRGL-PYSPHQDHSYFSQCALT 209
           P + LN+   +  +S  E +  +G R  SV QRHR TP R + P    +D SY  +    
Sbjct: 496 PFAHLNH---RESVSSGETHVPNGRRPKSVPQRHRRTPDRSMSPKGRSEDDSYDDEMLSA 552

Query: 210 REGL 221
            EGL
Sbjct: 553 IEGL 556


>AB029009-1|BAA83038.1|  902|Homo sapiens KIAA1086 protein protein.
          Length = 902

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/51 (27%), Positives = 21/51 (41%)
 Frame = +3

Query: 147 GRGLPYSPHQDHSYFSQCALTREGLC*PNQWSQETEAACKGPSPHANQXPA 299
           G+      ++D  YF   AL    +   +     T+ AC  PSPH +   A
Sbjct: 57  GQSAAARSYEDRPYFQSAALQSGRMTAADSGQPGTQEACGQPSPHGSHSHA 107


>AB007156-1|BAA25820.1|   60|Homo sapiens ribosomal protein S20
           protein.
          Length = 60

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +1

Query: 265 KGPVRMPTXILRIT 306
           KGPVRMPT  LRIT
Sbjct: 1   KGPVRMPTKTLRIT 14


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,771,046
Number of Sequences: 237096
Number of extensions: 898991
Number of successful extensions: 2195
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2195
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)