Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_O18
         (308 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    22   1.9  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   4.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   4.5  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    20   5.9  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              20   5.9  

>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 121 TLQRLPCCLLNSGRD 77
           TL R PC LLN   D
Sbjct: 22  TLGRFPCLLLNGKXD 36


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +3

Query: 75  LSRPEFNKQHGSRCSVRQRHRETPGRG 155
           ++  EFN ++  +C+ ++   E  GRG
Sbjct: 55  INESEFNDENYWQCNDKKTDIEETGRG 81


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 102 VAC*IPAEINNFSIKNCSALXPEKPHVSSN 13
           +AC   A+ N+    N   L  E  H SSN
Sbjct: 283 LACMFDAQTNSMICLNGQVLKRESIHNSSN 312


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 87  EFNKQHGSRCSVRQRHRETPG 149
           EF++   S+CS+ QR  E  G
Sbjct: 265 EFDEFGDSKCSLCQRRFEEQG 285


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 5/17 (29%), Positives = 11/17 (64%)
 Frame = -3

Query: 63  IKNCSALXPEKPHVSSN 13
           + +CS +  E PH+ ++
Sbjct: 101 VSDCSTISEENPHLKAS 117


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,458
Number of Sequences: 438
Number of extensions: 1523
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6471036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)