Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_O08
         (655 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              24   1.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   3.4  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   6.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   6.0  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   7.9  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   7.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.9  

>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = +2

Query: 158 ADIRIQSPEDFLVTADCQGRADTDIHLLAAYLVMATLEVATATRLL 295
           A+I +   E   +  +C   +D DIHL ++ L+    +  T   ++
Sbjct: 88  AEIYLDENEVNKLITECSAISDADIHLKSSKLIKCFAKYKTLKEIM 133


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/42 (33%), Positives = 16/42 (38%)
 Frame = +1

Query: 394 PSSGGQSYPKXXXXXXXXXXXXXSPPPQIRYNPPHGPPMVYP 519
           PSSG    P+             SPP   +  PP GPP   P
Sbjct: 16  PSSGAPG-PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 447 QPLSLQSPATNKIQSAPRPTNGLP 518
           QP   QSP   +  S P P+ G P
Sbjct: 24  QPSPHQSPQAPQRGSPPNPSQGPP 47


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +3

Query: 396 VFRRTELPKNDSYYNNTQPLSLQSPATNKIQSAPR 500
           VF   E  K D+YY N      + PA     SA R
Sbjct: 420 VFHVQETDKYDAYYGNRFSGEYEIPAHGLPPSATR 454


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 418 GSSVLLKTDNRGYSLYCHDRTCL 350
           GS+VLL +D     LYC  R  L
Sbjct: 672 GSAVLLISDRLSRDLYCGIRAGL 694


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 418 GSSVLLKTDNRGYSLYCHDRTCL 350
           GS+VLL +D     LYC  R  L
Sbjct: 710 GSAVLLISDRLSRDLYCGIRAGL 732


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +3

Query: 228 ISIFWRPIWSW 260
           +S+FW   W W
Sbjct: 165 LSVFWGSAWQW 175



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/15 (46%), Positives = 7/15 (46%)
 Frame = +3

Query: 282 LPVFWRLVWSW*HRR 326
           L VFW   W W   R
Sbjct: 165 LSVFWGSAWQWNEER 179


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +3

Query: 45  KQTHFHNVFKTLCVIATYCDFVYY*CTK 128
           K T  HN F+    +   CD ++   TK
Sbjct: 199 KPTRDHNAFEYAMAVMKMCDILHLRHTK 226


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 515 TQFTTEPLRPTFTRRKTLEANTE 583
           +QF  +  R T+TR +TLE   E
Sbjct: 266 SQFERKRGRQTYTRYQTLELEKE 288


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 258 WQHWK*PRL 284
           W+HWK P L
Sbjct: 862 WRHWKFPNL 870


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,618
Number of Sequences: 438
Number of extensions: 4104
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)