Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_O03
(659 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54216-9|CAN86906.1| 155|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z54216-8|CAA90948.1| 101|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical pr... 40 0.002
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 34 0.078
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 30 1.7
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 30 1.7
AL132862-27|CAB60564.1| 682|Caenorhabditis elegans Hypothetical... 30 1.7
AY835433-1|AAX37360.1| 331|Caenorhabditis elegans bZIP transcri... 29 2.2
AY835432-1|AAX37359.1| 467|Caenorhabditis elegans bZIP transcri... 29 2.2
AF016681-6|AAB66175.2| 317|Caenorhabditis elegans Hypothetical ... 29 2.2
AF016440-2|AAB65905.2| 331|Caenorhabditis elegans Abnormal ever... 29 2.2
AF016440-1|ABA54419.1| 467|Caenorhabditis elegans Abnormal ever... 29 2.2
U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical p... 29 3.9
AF077542-6|AAC26298.1| 108|Caenorhabditis elegans Hypothetical ... 29 3.9
Z82083-9|CAB04975.1| 635|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z81503-6|CAB04115.1| 635|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 28 5.1
Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue... 28 5.1
U97190-7|AAF23185.1| 650|Caenorhabditis elegans Related to yeas... 28 5.1
U97190-6|AAV58893.1| 716|Caenorhabditis elegans Related to yeas... 28 5.1
U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeas... 28 5.1
U97190-4|AAV58894.1| 720|Caenorhabditis elegans Related to yeas... 28 5.1
U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeas... 28 5.1
U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug resis... 28 5.1
U29612-3|AAA68802.2| 289|Caenorhabditis elegans Hypothetical pr... 28 5.1
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 28 5.1
AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical... 27 8.9
AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical... 27 8.9
AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding p... 27 8.9
AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding p... 27 8.9
AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z54216-9|CAN86906.1| 155|Caenorhabditis elegans Hypothetical
protein T24H10.7d protein.
Length = 155
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +2
Query: 569 PLSPIDMDTQEKIKLERKRQRNRVAASKCR 658
P++ + +D QEK KLERKR RNR AA+KCR
Sbjct: 69 PINMMALDDQEKKKLERKRARNRQAATKCR 98
>Z54216-8|CAA90948.1| 101|Caenorhabditis elegans Hypothetical
protein T24H10.7c protein.
Length = 101
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +2
Query: 587 MDTQEKIKLERKRQRNRVAASKCR 658
+D QEK KLERKR RNR AA+KCR
Sbjct: 21 LDDQEKKKLERKRARNRQAATKCR 44
>Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical
protein T24H10.7b protein.
Length = 299
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +2
Query: 587 MDTQEKIKLERKRQRNRVAASKCR 658
+D QEK KLERKR RNR AA+KCR
Sbjct: 219 LDDQEKKKLERKRARNRQAATKCR 242
>Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical
protein T24H10.7a protein.
Length = 319
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +2
Query: 587 MDTQEKIKLERKRQRNRVAASKCR 658
+D QEK KLERKR RNR AA+KCR
Sbjct: 239 LDDQEKKKLERKRARNRQAATKCR 262
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
protein C34E10.8 protein.
Length = 1024
Score = 34.3 bits (75), Expect = 0.078
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +2
Query: 461 PLGRRVY---ADLDRPLERYPTPIVKDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQR 631
PL RR A + RP + P P + P P A TPP++ + Q+K+K++ +
Sbjct: 375 PLPRRYQGPPAQVLRPPQMGPPPGINQVPYQ-PKANRTPPMTSQQLHEQQKLKMQEEEMM 433
Query: 632 NRVAASKCR 658
++ AS R
Sbjct: 434 SQTCASDFR 442
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 521 IVKDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVA 643
+ D+P T S+A PP SPI ++T E +E ++++ + +
Sbjct: 22 VADDQPST--SSAVAPPPSPIAIETDEDAVVEEEKKKKKTS 60
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 521 IVKDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVA 643
+ D+P T S+A PP SPI ++T E +E ++++ + +
Sbjct: 22 VADDQPST--SSAVAPPPSPIAIETDEDAVVEEEKKKKKTS 60
>AL132862-27|CAB60564.1| 682|Caenorhabditis elegans Hypothetical
protein Y73F8A.35 protein.
Length = 682
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 404 YARPFVEALDKLHHGEAVT 460
Y RPF AL++ HHGE +T
Sbjct: 314 YMRPFQNALERPHHGEFIT 332
>AY835433-1|AAX37360.1| 331|Caenorhabditis elegans bZIP
transcription factor FOS-1b protein.
Length = 331
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 551 SAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCR 658
S+A P +M+ + K ++RQRN+ AA++CR
Sbjct: 10 SSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARCR 45
>AY835432-1|AAX37359.1| 467|Caenorhabditis elegans bZIP
transcription factor FOS-1a protein.
Length = 467
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 551 SAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCR 658
S+A P +M+ + K ++RQRN+ AA++CR
Sbjct: 146 SSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARCR 181
>AF016681-6|AAB66175.2| 317|Caenorhabditis elegans Hypothetical
protein F22E5.11 protein.
Length = 317
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 449 EAVTPLGRRVYADLDRPLERYPTPIVKDEPQTVPSAASTPPLSPIDMDTQE 601
EA+ LGR L +E+ TP +P T S ++ PL P D E
Sbjct: 189 EAIARLGREPIPVLPSKIEKTATPPTIGDPVTSSSDSTESPLIPEQPDNNE 239
>AF016440-2|AAB65905.2| 331|Caenorhabditis elegans Abnormal
eversion of vulva protein5, isoform a protein.
Length = 331
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 551 SAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCR 658
S+A P +M+ + K ++RQRN+ AA++CR
Sbjct: 10 SSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARCR 45
>AF016440-1|ABA54419.1| 467|Caenorhabditis elegans Abnormal
eversion of vulva protein5, isoform b protein.
Length = 467
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 551 SAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCR 658
S+A P +M+ + K ++RQRN+ AA++CR
Sbjct: 146 SSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARCR 181
>U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical
protein R05F9.12 protein.
Length = 955
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 528 FTMGVGYRSSGLSKSAYTLRPSGVTASPW 442
F GVGY S Y LR +G ++PW
Sbjct: 56 FKDGVGYNLDSQQGSTYNLRKNGGPSNPW 84
>AF077542-6|AAC26298.1| 108|Caenorhabditis elegans Hypothetical
protein Y57G7A.3a protein.
Length = 108
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 512 PTPIVKDEPQTVPSAASTPPLSPIDMDTQE 601
P PI K QT P+A + P +PI+ E
Sbjct: 51 PNPIKKSSTQTCPTAQTPPAKTPIERSRHE 80
>Z82083-9|CAB04975.1| 635|Caenorhabditis elegans Hypothetical
protein ZK1010.9 protein.
Length = 635
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 164 PLSGPVENLKRPLTLDVGRGGKRSRI 241
P GPV+ K+P T+D GR R+++
Sbjct: 34 PTKGPVQPQKKPTTVDNGRRAYRNQV 59
>Z81503-6|CAB04115.1| 635|Caenorhabditis elegans Hypothetical
protein ZK1010.9 protein.
Length = 635
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 164 PLSGPVENLKRPLTLDVGRGGKRSRI 241
P GPV+ K+P T+D GR R+++
Sbjct: 34 PTKGPVQPQKKPTTVDNGRRAYRNQV 59
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 121 FRPQHGDHLL*RAISSQRPCGKP*KAPNLGCWAGWETFTNRCTRS 255
FRP D + + +RPC N GCW W+ +++ C++S
Sbjct: 782 FRPCLTDQCSSKHLQEERPCD------NEGCWTNWDEWSS-CSQS 819
>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 121 FRPQHGDHLL*RAISSQRPCGKP*KAPNLGCWAGWETFTNRCTRS 255
FRP D + + +RPC N GCW W+ +++ C++S
Sbjct: 782 FRPCLTDQCSSKHLQEERPCD------NEGCWTNWDEWSS-CSQS 819
>Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue
protein.
Length = 897
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 497 PLERYPTPIVKDEPQTVPSAASTP 568
P E P P+V +E +PS A+TP
Sbjct: 429 PEEGNPVPVVSEEEGKIPSVATTP 452
>U97190-7|AAF23185.1| 650|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform b
protein.
Length = 650
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 497 PLERYPTPIVKDEPQTVPSAASTP 568
P E P P+V +E +PS A+TP
Sbjct: 182 PEEGNPVPVVSEEEGKIPSVATTP 205
>U97190-6|AAV58893.1| 716|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform d
protein.
Length = 716
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 497 PLERYPTPIVKDEPQTVPSAASTP 568
P E P P+V +E +PS A+TP
Sbjct: 429 PEEGNPVPVVSEEEGKIPSVATTP 452
>U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform c
protein.
Length = 897
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 497 PLERYPTPIVKDEPQTVPSAASTP 568
P E P P+V +E +PS A+TP
Sbjct: 429 PEEGNPVPVVSEEEGKIPSVATTP 452
>U97190-4|AAV58894.1| 720|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform e
protein.
Length = 720
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 497 PLERYPTPIVKDEPQTVPSAASTP 568
P E P P+V +E +PS A+TP
Sbjct: 433 PEEGNPVPVVSEEEGKIPSVATTP 456
>U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform a
protein.
Length = 901
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 497 PLERYPTPIVKDEPQTVPSAASTP 568
P E P P+V +E +PS A+TP
Sbjct: 433 PEEGNPVPVVSEEEGKIPSVATTP 456
>U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug
resistance protein familyprotein 6 protein.
Length = 1396
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 500 LERYPTPIVKDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQR 631
L+ T + DE V S+PP SP+++++ EKI E QR
Sbjct: 703 LQAVETEVQSDE-LFVDGPPSSPPPSPVNIESMEKINKESIFQR 745
>U29612-3|AAA68802.2| 289|Caenorhabditis elegans Hypothetical
protein C09B8.4 protein.
Length = 289
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 355 SACLISRSSTYGGTRNV 405
S CL S SSTYGG RN+
Sbjct: 7 SHCLKSSSSTYGGIRNI 23
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 121 FRPQHGDHLL*RAISSQRPCGKP*KAPNLGCWAGWETFTNRCTRS 255
FRP D + + +RPC N GCW W+ +++ C++S
Sbjct: 782 FRPCLTDQCSSKHLQEERPCD------NEGCWTNWDEWSS-CSQS 819
>AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical
protein Y75B8A.35b protein.
Length = 463
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 599 EKIKLERKRQRNRVAASKC 655
EK KLERK+++NR A C
Sbjct: 262 EKEKLERKKEQNRANAKNC 280
>AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical
protein Y75B8A.35a protein.
Length = 480
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 599 EKIKLERKRQRNRVAASKC 655
EK KLERK+++NR A C
Sbjct: 279 EKEKLERKKEQNRANAKNC 297
>AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 465
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 599 EKIKLERKRQRNRVAASKC 655
EK KLERK+++NR A C
Sbjct: 279 EKEKLERKKEQNRANAKNC 297
>AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 463
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 599 EKIKLERKRQRNRVAASKC 655
EK KLERK+++NR A C
Sbjct: 262 EKEKLERKKEQNRANAKNC 280
>AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical
protein K08D12.6 protein.
Length = 668
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +2
Query: 449 EAVTPLGRRVYADLDRPLERYPTPIVKDEPQTVPSAASTPP 571
E VTP A D P+E+ P + P P+ A+ P
Sbjct: 490 EQVTPAPAAAPAPADAPVEQAPVAVPAPAPAAAPAPAAPAP 530
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,539,310
Number of Sequences: 27780
Number of extensions: 333925
Number of successful extensions: 1061
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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