Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_N18
(582 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192 194 3e-50
03_01_0382 + 2961665-2961672,2962504-2962557,2962935-2963004,296... 194 3e-50
11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511 193 7e-50
03_03_0147 + 14838707-14838734,14839316-14839430,14839464-148396... 144 3e-35
07_03_1358 - 25984897-25984997,25985623-25985650 47 1e-05
08_02_1415 + 26912260-26913075,26913208-26913366,26913521-26913931 31 0.89
01_06_0939 - 33188620-33189252,33189570-33189680,33190460-331906... 28 4.7
07_03_1523 + 27432991-27433199,27433585-27434185,27434468-274346... 28 6.2
02_05_0230 + 27029725-27030871,27030995-27031113,27031225-270313... 28 6.2
08_02_0531 + 18256597-18256836,18257637-18257735,18258038-182581... 27 8.2
08_02_0251 - 14776308-14776495,14777624-14777708,14779125-147791... 27 8.2
08_01_0098 - 700443-700660,701112-701268,701586-701678,701763-70... 27 8.2
>11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192
Length = 195
Score = 194 bits (474), Expect = 3e-50
Identities = 97/161 (60%), Positives = 120/161 (74%)
Frame = +3
Query: 84 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 263
+ KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P
Sbjct: 10 YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNP 69
Query: 264 KRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRXQTQVFKXGLAKSIHHARI 443
+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RR QT VFK G+AKSIHHAR+
Sbjct: 70 RRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARV 129
Query: 444 LIRQRHIRVRKASCEHPIHLLCRPGTLGKHMDFSS*NLPFG 566
LIRQRHIRV + P ++ KH+DFS PFG
Sbjct: 130 LIRQRHIRVGRQIVNIPSFMVRVESE--KHIDFSL-TSPFG 167
>03_01_0382 +
2961665-2961672,2962504-2962557,2962935-2963004,
2963141-2963386,2967246-2967491,2968837-2968888,
2969270-2969651,2970527-2970681,2971389-2971713,
2975803-2975871,2976189-2976346,2976444-2976551,
2976659-2977131
Length = 781
Score = 194 bits (474), Expect = 3e-50
Identities = 97/161 (60%), Positives = 120/161 (74%)
Frame = +3
Query: 84 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 263
+ KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P
Sbjct: 226 YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNP 285
Query: 264 KRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRXQTQVFKXGLAKSIHHARI 443
+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RR QT VFK G+AKSIHHAR+
Sbjct: 286 RRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARV 345
Query: 444 LIRQRHIRVRKASCEHPIHLLCRPGTLGKHMDFSS*NLPFG 566
LIRQRHIRV + P ++ KH+DFS PFG
Sbjct: 346 LIRQRHIRVGRQIVNIPSFMVRVESE--KHIDFSL-TSPFG 383
>11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511
Length = 218
Score = 193 bits (471), Expect = 7e-50
Identities = 97/159 (61%), Positives = 119/159 (74%)
Frame = +3
Query: 90 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 269
KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R
Sbjct: 35 KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRR 94
Query: 270 LFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRXQTQVFKXGLAKSIHHARILI 449
+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RR QT VFK G+AKSIHHAR+LI
Sbjct: 95 IFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLI 154
Query: 450 RQRHIRVRKASCEHPIHLLCRPGTLGKHMDFSS*NLPFG 566
RQRHIRV + P ++ KH+DFS PFG
Sbjct: 155 RQRHIRVGRQIVNIPSFMVRVESE--KHIDFSL-TSPFG 190
>03_03_0147 +
14838707-14838734,14839316-14839430,14839464-14839697,
14840571-14840667
Length = 157
Score = 144 bits (350), Expect = 3e-35
Identities = 75/135 (55%), Positives = 92/135 (68%)
Frame = +3
Query: 84 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 263
+ KT+ PRRP+EK R D ELK+ GEYGLR+K E+WRV+ ELLTL+EK+P
Sbjct: 10 YGKTFKKPRRPYEKERPDAELKLYGEYGLRSKCELWRVQ-----------ELLTLDEKNP 58
Query: 264 KRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRXQTQVFKXGLAKSIHHARI 443
+R+FEG ALLR + R G+L E Q KLDYVL L +E+FL+ R QT VFK G KSIHH +
Sbjct: 59 RRIFEGEALLRHMNRYGLLGEGQNKLDYVLALTVENFLQCRLQTIVFKNGTVKSIHHDHV 118
Query: 444 LIRQRHIRVRKASCE 488
LIRQ HI S E
Sbjct: 119 LIRQHHISPLAVSLE 133
>07_03_1358 - 25984897-25984997,25985623-25985650
Length = 42
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +3
Query: 84 FSKTYVTPRRPFEKARLDQELKIIGEYG 167
+ KT+ PRRP+EK RLD ELK++GEYG
Sbjct: 10 YGKTFKKPRRPYEKERLDAELKLVGEYG 37
>08_02_1415 + 26912260-26913075,26913208-26913366,26913521-26913931
Length = 461
Score = 30.7 bits (66), Expect = 0.89
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 111 DEVSRTSLKIP-TVLCCSPSWRARTHCSPIRIRKEVI 4
DE S T+ K+ V CSP RA+ C +++ KEVI
Sbjct: 264 DEKSGTACKVEYQVEECSPENRAKNECIDVKVTKEVI 300
>01_06_0939 -
33188620-33189252,33189570-33189680,33190460-33190668,
33190781-33191078
Length = 416
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 138 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 260
Q L+ I G+ + +E++ + +L RIR R LT+E D
Sbjct: 212 QRLQTIHLLGIDDNQEIFTTQTSLTRIRAVPRYSLTIESLD 252
>07_03_1523 +
27432991-27433199,27433585-27434185,27434468-27434642,
27434686-27436418,27436871-27437317
Length = 1054
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = -1
Query: 513 GGTINEWDVHNLPCGHEYAFAGSKFWHDGWTSPGQX*TPASADDAPRSPQSSDQAHNRVS 334
GG +W V ++ +EYAF SK+ G +P + A D+ S S +Q +
Sbjct: 522 GGLTGQWGVESVDLYYEYAF--SKYMKGGLFAPERISLSNFAIDSLNSDLSKNQLYG--V 577
Query: 333 SVFHPVLQYEP 301
+ H LQ P
Sbjct: 578 WMMHIFLQRHP 588
>02_05_0230 +
27029725-27030871,27030995-27031113,27031225-27031349,
27031491-27031590,27031680-27031757,27032818-27032901,
27033077-27033162,27033869-27034049,27034596-27034646
Length = 656
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -1
Query: 150 SSTLGQDVPFQKDDEVSRTSLKIPTVLCCSPSWRARTHCSPIRIRKEVIQ 1
S+ +D F++DD S + +PT LC S S A + S + K ++
Sbjct: 190 STEFKKDQSFRRDDNHSSQTRNMPTELCTSSSEEAHIYESSLHGTKSNLE 239
>08_02_0531 +
18256597-18256836,18257637-18257735,18258038-18258184,
18258295-18258427,18258521-18258585,18258792-18258962,
18259095-18259199,18259495-18259602,18259792-18260088,
18260191-18260256,18260477-18260679,18261178-18261232,
18261318-18261503,18261701-18261985
Length = 719
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +3
Query: 117 FEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAAR----ELLTLE 251
FE A+ ++ KII E R+ ++ +KY LA A ELL L+
Sbjct: 394 FEMAKQEESKKIISEEHQRSNEQITDLKYKLANCMNALESKNLELLNLQ 442
>08_02_0251 -
14776308-14776495,14777624-14777708,14779125-14779160,
14779930-14780177,14780670-14780901,14781159-14781937,
14781987-14782155
Length = 578
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -1
Query: 195 RAILHACCGDRTLR*SSTLGQDVPFQKDDEVSRTSLKIPTVLC 67
R I+H C + T R LG D DE S S K LC
Sbjct: 265 REIIHCCADETTKRIIEELGDDYYAILADECSDLSYKEQLALC 307
>08_01_0098 -
700443-700660,701112-701268,701586-701678,701763-702149,
702755-702829,703486-703609,703693-703832,703904-703993,
704254-704298,704917-705042,705138-705272,705966-706451,
706539-706596,706728-706855,707209-707463
Length = 838
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 133 RRAFSKGRRGVTYVFENTDGTLLFTILASSHALLADK-N*KRSDP 2
R F+K RG+ YV + + L I + H LLA K + RSDP
Sbjct: 706 RDKFTKKSRGIAYVDFSDNEHLEAAIRKNKHKLLAKKVSVARSDP 750
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,270,198
Number of Sequences: 37544
Number of extensions: 342477
Number of successful extensions: 839
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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