Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_N18
(582 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 252 7e-67
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 252 7e-67
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 252 7e-67
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 252 7e-67
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 252 7e-67
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 252 7e-67
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 252 7e-67
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 252 7e-67
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 251 2e-66
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 236 5e-62
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 144 3e-34
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 126 6e-29
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 50 5e-06
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 50 5e-06
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 50 5e-06
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 50 5e-06
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 50 5e-06
AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subf... 32 1.7
AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette tr... 32 1.7
AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette tr... 32 1.7
AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein. 32 1.7
X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12 pro... 30 6.8
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 252 bits (617), Expect = 7e-67
Identities = 126/162 (77%), Positives = 139/162 (85%)
Frame = +3
Query: 81 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 260
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 261 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRXQTQVFKXGLAKSIHHAR 440
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERR QTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 441 ILIRQRHIRVRKASCEHPIHLLCRPGTLGKHMDFSS*NLPFG 566
+LIRQRHIRVRK P ++ KH+DFS P+G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQ--KHIDFSL-RSPYG 166
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 252 bits (617), Expect = 7e-67
Identities = 126/162 (77%), Positives = 139/162 (85%)
Frame = +3
Query: 81 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 260
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 261 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRXQTQVFKXGLAKSIHHAR 440
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERR QTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 441 ILIRQRHIRVRKASCEHPIHLLCRPGTLGKHMDFSS*NLPFG 566
+LIRQRHIRVRK P ++ KH+DFS P+G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQ--KHIDFSL-RSPYG 166
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 252 bits (617), Expect = 7e-67
Identities = 126/162 (77%), Positives = 139/162 (85%)
Frame = +3
Query: 81 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 260
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 261 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRXQTQVFKXGLAKSIHHAR 440
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERR QTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 441 ILIRQRHIRVRKASCEHPIHLLCRPGTLGKHMDFSS*NLPFG 566
+LIRQRHIRVRK P ++ KH+DFS P+G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQ--KHIDFSL-RSPYG 166
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 252 bits (617), Expect = 7e-67
Identities = 126/162 (77%), Positives = 139/162 (85%)
Frame = +3
Query: 81 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 260
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 261 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRXQTQVFKXGLAKSIHHAR 440
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERR QTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 441 ILIRQRHIRVRKASCEHPIHLLCRPGTLGKHMDFSS*NLPFG 566
+LIRQRHIRVRK P ++ KH+DFS P+G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQ--KHIDFSL-RSPYG 166
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 252 bits (617), Expect = 7e-67
Identities = 126/162 (77%), Positives = 139/162 (85%)
Frame = +3
Query: 81 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 260
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 261 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRXQTQVFKXGLAKSIHHAR 440
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERR QTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 441 ILIRQRHIRVRKASCEHPIHLLCRPGTLGKHMDFSS*NLPFG 566
+LIRQRHIRVRK P ++ KH+DFS P+G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQ--KHIDFSL-RSPYG 166
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 252 bits (617), Expect = 7e-67
Identities = 126/162 (77%), Positives = 139/162 (85%)
Frame = +3
Query: 81 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 260
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 261 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRXQTQVFKXGLAKSIHHAR 440
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERR QTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 441 ILIRQRHIRVRKASCEHPIHLLCRPGTLGKHMDFSS*NLPFG 566
+LIRQRHIRVRK P ++ KH+DFS P+G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQ--KHIDFSL-RSPYG 166
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 252 bits (617), Expect = 7e-67
Identities = 126/162 (77%), Positives = 139/162 (85%)
Frame = +3
Query: 81 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 260
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 261 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRXQTQVFKXGLAKSIHHAR 440
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERR QTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 441 ILIRQRHIRVRKASCEHPIHLLCRPGTLGKHMDFSS*NLPFG 566
+LIRQRHIRVRK P ++ KH+DFS P+G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQ--KHIDFSL-RSPYG 166
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 252 bits (617), Expect = 7e-67
Identities = 126/162 (77%), Positives = 139/162 (85%)
Frame = +3
Query: 81 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 260
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 261 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRXQTQVFKXGLAKSIHHAR 440
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERR QTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 441 ILIRQRHIRVRKASCEHPIHLLCRPGTLGKHMDFSS*NLPFG 566
+LIRQRHIRVRK P ++ KH+DFS P+G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQ--KHIDFSL-RSPYG 166
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 251 bits (614), Expect = 2e-66
Identities = 123/155 (79%), Positives = 136/155 (87%)
Frame = +3
Query: 81 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 260
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 261 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRXQTQVFKXGLAKSIHHAR 440
P+RLFEGNALLRRLVR+GVLDE +MKLDY+LGLKIEDFLERR QTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 441 ILIRQRHIRVRKASCEHPIHLLCRPGTLGKHMDFS 545
+LIRQRHIRVRK P ++ KH+DFS
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQ--KHIDFS 160
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 236 bits (577), Expect = 5e-62
Identities = 118/155 (76%), Positives = 131/155 (84%)
Frame = +3
Query: 81 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 260
V KTYVTPRR FEK+RLDQELK+I EYGLRNKREVWRVK+TLA+IRKAARELLTL++KD
Sbjct: 8 VCRKTYVTPRRSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKD 67
Query: 261 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRXQTQVFKXGLAKSIHHAR 440
P+RLFEGNALL RLV IGVLDE +MKLDY+LGLKIEDFLERR QTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLWRLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 441 ILIRQRHIRVRKASCEHPIHLLCRPGTLGKHMDFS 545
+LIRQRH RVRK P ++ KH+DFS
Sbjct: 128 VLIRQRHFRVRKQVVNIPSFIVRLDSQ--KHIDFS 160
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 144 bits (348), Expect = 3e-34
Identities = 74/104 (71%), Positives = 83/104 (79%)
Frame = +3
Query: 255 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRXQTQVFKXGLAKSIHH 434
+DP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERR QTQVFK GLAKSIHH
Sbjct: 5 EDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 64
Query: 435 ARILIRQRHIRVRKASCEHPIHLLCRPGTLGKHMDFSS*NLPFG 566
AR+LIRQRHIRVRK P ++ KH+DFS P+G
Sbjct: 65 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQ--KHIDFSL-RSPYG 105
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 126 bits (304), Expect = 6e-29
Identities = 57/63 (90%), Positives = 63/63 (100%)
Frame = +3
Query: 90 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 269
KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+R
Sbjct: 2 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 61
Query: 270 LFE 278
LFE
Sbjct: 62 LFE 64
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 50.4 bits (115), Expect = 5e-06
Identities = 33/124 (26%), Positives = 57/124 (45%)
Frame = +3
Query: 141 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 320
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 321 DEKQMKLDYVLGLKIEDFLERRXQTQVFKXGLAKSIHHARILIRQRHIRVRKASCEHPIH 500
+ L+ + F RR T + K +A+ + A + Q H+RV P
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 501 LLCR 512
L+ R
Sbjct: 149 LVTR 152
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 50.4 bits (115), Expect = 5e-06
Identities = 33/124 (26%), Positives = 57/124 (45%)
Frame = +3
Query: 141 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 320
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 321 DEKQMKLDYVLGLKIEDFLERRXQTQVFKXGLAKSIHHARILIRQRHIRVRKASCEHPIH 500
+ L+ + F RR T + K +A+ + A + Q H+RV P
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 501 LLCR 512
L+ R
Sbjct: 149 LVTR 152
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 50.4 bits (115), Expect = 5e-06
Identities = 33/124 (26%), Positives = 57/124 (45%)
Frame = +3
Query: 141 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 320
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 321 DEKQMKLDYVLGLKIEDFLERRXQTQVFKXGLAKSIHHARILIRQRHIRVRKASCEHPIH 500
+ L+ + F RR T + K +A+ + A + Q H+RV P
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 501 LLCR 512
L+ R
Sbjct: 149 LVTR 152
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 50.4 bits (115), Expect = 5e-06
Identities = 33/124 (26%), Positives = 57/124 (45%)
Frame = +3
Query: 141 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 320
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 321 DEKQMKLDYVLGLKIEDFLERRXQTQVFKXGLAKSIHHARILIRQRHIRVRKASCEHPIH 500
+ L+ + F RR T + K +A+ + A + Q H+RV P
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 501 LLCR 512
L+ R
Sbjct: 149 LVTR 152
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 50.4 bits (115), Expect = 5e-06
Identities = 33/124 (26%), Positives = 57/124 (45%)
Frame = +3
Query: 141 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 320
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 321 DEKQMKLDYVLGLKIEDFLERRXQTQVFKXGLAKSIHHARILIRQRHIRVRKASCEHPIH 500
+ L+ + F RR T + K +A+ + A + Q H+RV P
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 501 LLCR 512
L+ R
Sbjct: 149 LVTR 152
>AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subfamily
A protein.
Length = 2595
Score = 31.9 bits (69), Expect = 1.7
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -1
Query: 279 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 121
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 998 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 1056
Query: 120 QKDDEVSRTSLKIPTVL 70
KD+ ++ S +P VL
Sbjct: 1057 MKDNFLTSVSYSLPIVL 1073
>AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette
transporter family A member 12 protein.
Length = 2277
Score = 31.9 bits (69), Expect = 1.7
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -1
Query: 279 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 121
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 680 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 738
Query: 120 QKDDEVSRTSLKIPTVL 70
KD+ ++ S +P VL
Sbjct: 739 MKDNFLTSVSYSLPIVL 755
>AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette
transporter family A member 12 protein.
Length = 2347
Score = 31.9 bits (69), Expect = 1.7
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -1
Query: 279 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 121
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 750 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 808
Query: 120 QKDDEVSRTSLKIPTVL 70
KD+ ++ S +P VL
Sbjct: 809 MKDNFLTSVSYSLPIVL 825
>AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein.
Length = 2413
Score = 31.9 bits (69), Expect = 1.7
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -1
Query: 279 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 121
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 998 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 1056
Query: 120 QKDDEVSRTSLKIPTVL 70
KD+ ++ S +P VL
Sbjct: 1057 MKDNFLTSVSYSLPIVL 1073
>X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 29.9 bits (64), Expect = 6.8
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 357 LKIEDFLERRXQTQVFKXGLAKSIHHARILI--RQRHIRVRKASCEHPIHLLCRPGTLGK 530
+ + L+ +T + GLA+ I A + RQ H+ V+ ++C+ P+++ L +
Sbjct: 12 MDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVQASNCDEPMYVKLVEALLAE 71
Query: 531 H 533
H
Sbjct: 72 H 72
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,981,229
Number of Sequences: 237096
Number of extensions: 1830304
Number of successful extensions: 5333
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 5197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5333
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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