Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_N17
         (656 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    25   0.84 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    24   1.1  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    24   1.1  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    24   1.1  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    22   5.9  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   5.9  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   5.9  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   7.8  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 47  VSXFEITFYT*KTVRVLKWRPKCRLCMTSLVSLAP 151
           ++ F   FY+    R+  WR  CR C  S  +L P
Sbjct: 354 INPFIYAFYS-ADFRLAFWRLTCRKCFKSRTNLDP 387


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 515 GITMDDCWLYCDVLFCCWA 459
           GI +   WL CDVL CC A
Sbjct: 105 GIHLCKLWLTCDVL-CCTA 122


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 515 GITMDDCWLYCDVLFCCWA 459
           GI +   WL CDVL CC A
Sbjct: 105 GIHLCKLWLTCDVL-CCTA 122


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 515 GITMDDCWLYCDVLFCCWA 459
           GI +   WL CDVL CC A
Sbjct: 105 GIHLCKLWLTCDVL-CCTA 122


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/28 (35%), Positives = 11/28 (39%)
 Frame = +1

Query: 310 APPAPRYDQAADDWGEQHYSAGDNNYQR 393
           APP P   Q A +W   H    D    R
Sbjct: 106 APPIPPEIQRALEWNAAHPEEDDGGQPR 133


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 450 DRTSPATKQDIAVQPAIIHCDSRYAY 527
           D+TS +   D+ +     +CD+ YAY
Sbjct: 165 DQTSDSFFVDLVIDVDPNNCDNTYAY 190


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 634 FLH*SLKMVQICFF*LCPLMSYNLKMCH 551
           F+H SLK V +  F  C  +S N K  H
Sbjct: 105 FVHESLKNVLLWDFQECTFISVNGKEVH 132


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/36 (22%), Positives = 19/36 (52%)
 Frame = -3

Query: 420 IPAIFMRNSSLVIVISCTVVLFAPVICCLIISRCWR 313
           +P +    +S +  + CT+ LFA ++    ++  +R
Sbjct: 285 LPKVSYIKASEIWFLGCTIFLFAAMVEFAFVNTIYR 320


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,550
Number of Sequences: 438
Number of extensions: 3694
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)