Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_M17
(428 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1031 - 33626527-33626580,33627482-33627563,33628892-33628911 58 2e-09
07_03_1305 - 25638531-25638584,25638909-25638990,25639087-256391... 55 2e-08
03_03_0210 + 15470680-15470715,15473088-15473342,15473417-154734... 55 2e-08
04_04_0390 - 24882572-24882577,24882928-24883009,24883089-248832... 48 3e-06
04_04_0293 - 24189344-24189350,24189804-24190026,24190411-241905... 32 0.23
04_04_1615 + 34793511-34793660,34794013-34794070,34794163-347944... 31 0.39
09_06_0272 - 21962495-21962524,21962742-21962918 31 0.52
05_05_0223 - 23406814-23407477,23407597-23407919 31 0.52
01_06_0893 - 32766994-32768841,32769596-32769782,32769860-327699... 30 0.69
04_02_0017 - 8572400-8572732,8572818-8572919,8573138-8573230,857... 29 2.1
12_01_0333 + 2570807-2571061,2571186-2571397,2571961-2572225,257... 28 2.8
05_01_0431 + 3412178-3412336,3413012-3413109,3413185-3413312,341... 28 2.8
07_01_0408 - 3137705-3138017,3139361-3139371,3140693-3140770,314... 27 4.9
06_01_1095 + 8984363-8984789,8985175-8985416,8985500-8985622,898... 27 4.9
02_05_0832 - 32077490-32078782 27 4.9
11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,223... 27 6.4
03_05_1133 - 30614901-30615389,30615823-30615933,30616113-306161... 27 6.4
01_06_1597 + 38528241-38528588,38529623-38529721,38529814-385299... 27 6.4
01_05_0315 + 20803035-20803154,20803235-20804089,20804171-208043... 27 6.4
06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499 27 8.5
06_01_0294 + 2151131-2151529 27 8.5
>02_05_1031 - 33626527-33626580,33627482-33627563,33628892-33628911
Length = 51
Score = 58.4 bits (135), Expect = 2e-09
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +3
Query: 147 CQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAG 272
C + +GE + C + + YRSLCP EW+++W QRA GTFAG
Sbjct: 8 CIEAKGEGSDECTKYAKCYRSLCPGEWIERWKEQRANGTFAG 49
>07_03_1305 -
25638531-25638584,25638909-25638990,25639087-25639169,
25639252-25639515,25639984-25640060,25640183-25640277,
25640953-25641065
Length = 255
Score = 55.2 bits (127), Expect = 2e-08
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = +3
Query: 147 CQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAG 272
C +GE C F + YRSLCP+EW+++W+ QR GTF G
Sbjct: 212 CVAAKGEGAPECEKFAKYYRSLCPSEWIERWNEQRENGTFPG 253
Score = 46.0 bits (104), Expect = 1e-05
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +2
Query: 47 KSPADLKTAPFDPRFPNQNQTRHCYQSYVDFHR 145
K ++TAP D RFP NQTRHC+ Y+++HR
Sbjct: 179 KPEIKIETAPADFRFPTTNQTRHCFTRYIEYHR 211
>03_03_0210 +
15470680-15470715,15473088-15473342,15473417-15473499,
15473617-15473698,15474886-15474939
Length = 169
Score = 55.2 bits (127), Expect = 2e-08
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +3
Query: 147 CQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAG 272
C +GE C F + YRSLCP EWV++W+ QR GTF G
Sbjct: 126 CVAAKGEDAPECDKFAKYYRSLCPGEWVERWNEQRENGTFPG 167
Score = 46.4 bits (105), Expect = 1e-05
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +2
Query: 47 KSPADLKTAPFDPRFPNQNQTRHCYQSYVDFHR 145
K ++TAP D RFP NQTRHC+ YV++HR
Sbjct: 93 KPEIKIETAPADFRFPTTNQTRHCFTRYVEYHR 125
>04_04_0390 -
24882572-24882577,24882928-24883009,24883089-24883200,
24883411-24883441
Length = 76
Score = 48.0 bits (109), Expect = 3e-06
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +2
Query: 59 DLKTAPFDPRFPNQNQTRHCYQSYVDFHR 145
++KTAP D RFP NQTRHC+ Y+++HR
Sbjct: 20 EIKTAPADFRFPTTNQTRHCFTRYIEYHR 48
Score = 34.7 bits (76), Expect = 0.032
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 147 CQKVRGEKYEPCYYFKRVYRSLCPNEW 227
C +GE C F + YRSLCP EW
Sbjct: 49 CVNAKGEATADCEKFAKYYRSLCPAEW 75
>04_04_0293 -
24189344-24189350,24189804-24190026,24190411-24190529,
24191331-24191578
Length = 198
Score = 31.9 bits (69), Expect = 0.23
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Frame = +1
Query: 82 PTVP*PKSDEALLPKLRGLPPX--ARKFAA------KNTSHATISRECTGLSAPMSGSTS 237
P P PK+ A P + P ARK A K T+ A + + T +AP S + S
Sbjct: 5 PAAPAPKAPAAAGPAPKATAPAGPARKAPAAAGPAPKATAPAGPAPKATATAAPSSKAPS 64
Query: 238 GTTSAPKAPSPV 273
+P+APSPV
Sbjct: 65 PAAPSPEAPSPV 76
>04_04_1615 +
34793511-34793660,34794013-34794070,34794163-34794410,
34794485-34794601,34795309-34795369,34795860-34795954,
34796048-34796122,34796316-34796401,34796529-34796578,
34796667-34796707,34796784-34796948,34797204-34797271,
34797362-34797422,34797878-34798393
Length = 596
Score = 31.1 bits (67), Expect = 0.39
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 121 PKLRGLPPXARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPSPVGFRS*T 291
P + GLPP + + +SH + R+ + LSAP S S G ++ S GF S T
Sbjct: 519 PGVVGLPPL-HSVSTQGSSHPMLQRQASSLSAPSSPSPRG-GGMTRSMSMPGFASLT 573
>09_06_0272 - 21962495-21962524,21962742-21962918
Length = 68
Score = 30.7 bits (66), Expect = 0.52
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 285 GSKSYRRRCLRRAGCPTCRPTHWGRET 205
G +R++ G P CRP HW R T
Sbjct: 11 GGGDFRQKVWSMTGGPYCRPVHWRRNT 37
>05_05_0223 - 23406814-23407477,23407597-23407919
Length = 328
Score = 30.7 bits (66), Expect = 0.52
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 157 FAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPS 267
FA+ N A++S C+G A + TS +S P+AP+
Sbjct: 219 FASSNGGDASVSWPCSGDDAQNNSETSHESSPPEAPA 255
>01_06_0893 - 32766994-32768841,32769596-32769782,32769860-32769987,
32770080-32770283,32770373-32770523,32771424-32771533,
32772534-32772903,32773031-32773189,32773719-32773848,
32773921-32773989,32774066-32774154,32774319-32774439,
32775878-32776148
Length = 1278
Score = 30.3 bits (65), Expect = 0.69
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +1
Query: 61 PQNSTFRPTVP*PKSDEALLPKLRGLPPXARKFAAKNTS---HATISRECTGLSAPMSGS 231
PQ T+P PK L+ K+ L P +++ ++ + S A + ++ LS + +
Sbjct: 863 PQVGKVAKTIPTPKQPAPLVDKVTSLDPVSKQMSSMSNSEAREAILPKKAAVLSVSQTPA 922
Query: 232 TSGTTSAP 255
S +SAP
Sbjct: 923 ISRPSSAP 930
>04_02_0017 -
8572400-8572732,8572818-8572919,8573138-8573230,
8573391-8573519,8573781-8574025,8574184-8574453,
8574590-8574752,8575965-8576063
Length = 477
Score = 28.7 bits (61), Expect = 2.1
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -3
Query: 333 DLIKTNRNKLKHRERLGSKSYR 268
+L KTNR+K+K+ GS+SY+
Sbjct: 306 ELNKTNRSKVKYHHTTGSRSYK 327
>12_01_0333 +
2570807-2571061,2571186-2571397,2571961-2572225,
2572542-2572841
Length = 343
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 151 WQXVEVHVTLVAVPRLILVREPWVERCCFEVGG 53
WQ E + LV + R I R PW++ F GG
Sbjct: 288 WQGYEDRLVLVELQRYIAQRLPWIQYHEFPEGG 320
>05_01_0431 +
3412178-3412336,3413012-3413109,3413185-3413312,
3413770-3413881,3414309-3414489,3414714-3414896,
3415133-3415315,3416062-3416131,3416413-3416522,
3416604-3416908,3417079-3417175,3417622-3417765,
3418217-3418303,3418387-3418473,3418566-3418706,
3418805-3418930,3419166-3419264,3419690-3419757,
3420275-3420341,3420713-3420883,3420959-3421048,
3421831-3421911,3423397-3423470,3423784-3423855,
3423925-3424017,3424138-3424204
Length = 1030
Score = 28.3 bits (60), Expect = 2.8
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +3
Query: 186 YFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI*ILNVPD 299
+F R ++ L PNEW++ ++ + +G + L++ D
Sbjct: 879 HFLRGFQQLIPNEWINMFNEHEFQVLISGSLESLDIDD 916
>07_01_0408 -
3137705-3138017,3139361-3139371,3140693-3140770,
3141105-3141206,3141309-3141380,3141484-3141558
Length = 216
Score = 27.5 bits (58), Expect = 4.9
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 115 LLPKLRGLPPXARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPSP 270
L+P +RG P + AA + +T +R + L+ +S T SA + P
Sbjct: 40 LVPVIRGATPFSSAVAAAAAAASTPARSSSALTQTLSFPIQATRSAATSTPP 91
>06_01_1095 +
8984363-8984789,8985175-8985416,8985500-8985622,
8985783-8985899,8986258-8986399,8986587-8986627,
8987194-8987453,8987505-8987607,8987698-8987776,
8987856-8988115
Length = 597
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 248 LVVPLVDPLIGAERPVHSLEIVAWLVFFAANFLAXGGSP 132
++VP +D ++GAE P ++ I A L L GSP
Sbjct: 225 IIVPFLDGILGAEIPAYTW-IGALLSLIGVGILELSGSP 262
>02_05_0832 - 32077490-32078782
Length = 430
Score = 27.5 bits (58), Expect = 4.9
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 121 PKLRGLPPXARKFAAKNTSHATISRECTGLSAPMSGST-SGTTSAPKAPSPVGFRS 285
P+LRG F +T+ A ++ + L A + +GT S+PK P PV S
Sbjct: 239 PRLRGKVGSGVDFDPFSTALAKAAKGPSPLGAGAKDTADAGTASSPKKPDPVSVTS 294
>11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,
2233053-2233513,2233593-2233717,2233801-2234098,
2235004-2236234,2236562-2237233,2237329-2238539
Length = 1884
Score = 27.1 bits (57), Expect = 6.4
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 117 ATKVTWTSTXCQKVRGEKYEPCYYF 191
A W C V G++YEP YF
Sbjct: 1749 AANCPWNDISCGSVAGDEYEPQTYF 1773
>03_05_1133 -
30614901-30615389,30615823-30615933,30616113-30616178,
30616347-30616406,30616493-30616801,30616960-30617108,
30617200-30617269,30617370-30617494,30617516-30617573,
30618176-30618370,30618585-30618857,30618950-30619120,
30619203-30619333,30619423-30619582,30619712-30619900,
30620023-30620118,30620381-30620611,30620715-30620853,
30620903-30621057,30621160-30621378
Length = 1131
Score = 27.1 bits (57), Expect = 6.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 104 QTRHCYQSYVDFHRLPESSRRKIRAMLLFQESVQV 208
Q CY Y +++LPE R + ++ L +S+QV
Sbjct: 662 QPGECYHLYPRYYQLPELLRTPLNSLCLQIKSLQV 696
>01_06_1597 +
38528241-38528588,38529623-38529721,38529814-38529927,
38530349-38530420,38530520-38530630,38530738-38530857,
38531541-38531613,38531997-38532077,38532167-38532231,
38532383-38532484,38532571-38532744,38532873-38532938
Length = 474
Score = 27.1 bits (57), Expect = 6.4
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +1
Query: 82 PTVP*PKSDEALLPKLRGLPPXARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKA 261
PTV +S A+ + +PP +FA + ATI+ + AP + +G +AP A
Sbjct: 3 PTVGIKRSAAAVATQTISVPPPDARFAVREAVRATIA--SPPVEAP--PAAAGKAAAP-A 57
Query: 262 PSPVGF 279
P+ GF
Sbjct: 58 PAVEGF 63
>01_05_0315 +
20803035-20803154,20803235-20804089,20804171-20804350,
20805191-20805286,20805895-20806179
Length = 511
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 128 YVDFHRLPESSRRKIRAMLLFQESVQVSLPQ*VGRQ 235
+VDF LPE +I + L +++VQ+S+ V R+
Sbjct: 32 WVDFQSLPEDILSRIMSKLTLKQAVQMSMVSSVFRR 67
>06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499
Length = 524
Score = 26.6 bits (56), Expect = 8.5
Identities = 13/56 (23%), Positives = 25/56 (44%)
Frame = +2
Query: 41 MIKSPADLKTAPFDPRFPNQNQTRHCYQSYVDFHRLPESSRRKIRAMLLFQESVQV 208
+ +S + PF R P+ RH ++ + H L RK+ +++F + V
Sbjct: 246 LARSDLTIVHIPFPDRMPHDWADRHATENRMRLHALRVIRERKMDGVIVFADDSNV 301
>06_01_0294 + 2151131-2151529
Length = 132
Score = 26.6 bits (56), Expect = 8.5
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 121 PKLRGLPPXARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPS 267
P + G PP R+ ++ T+ CT L+ ++G+TS + + P+
Sbjct: 39 PNVGGRPP--RRLRSQATTSMIRCSSCTSLTILLTGATSSVNGSNQMPT 85
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,341,155
Number of Sequences: 37544
Number of extensions: 211746
Number of successful extensions: 768
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 802495716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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