Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_M14
         (655 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   3.7  
DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domai...    23   8.4  
AF043433-2|AAC05657.1|  239|Anopheles gambiae putative pupal-spe...    23   8.4  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 177  SLSLPATSSQYRKCSMKKLESHYQMY*SNI 266
            S S  +++S      M K ESHY MY SN+
Sbjct: 1102 SHSSSSSNSAGSWAGMGKQESHYVMYPSNV 1131


>DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 103

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 340 RKNYDRDRFTGDCVWRR 390
           +KNY R    G C+W +
Sbjct: 75  KKNYVRRAIGGSCIWAK 91


>AF043433-2|AAC05657.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 239

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 415 HQIIKLPMDVSTHSH 371
           H++I  P+DVS+++H
Sbjct: 162 HKVIAQPVDVSSYAH 176


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,102
Number of Sequences: 2352
Number of extensions: 16286
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)