Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_M08
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0700 + 13058446-13058790,13059352-13059582,13060083-130602... 173 8e-44
07_03_1770 - 29382508-29382591,29382901-29383041,29383134-293835... 61 7e-10
03_02_0691 + 10432615-10433109,10433155-10433216,10433526-104335... 61 9e-10
02_01_0754 - 5595813-5595887,5595973-5596071,5596136-5596327,559... 57 1e-08
09_06_0271 + 21959213-21960559 56 3e-08
06_03_0711 + 23798998-23799106,23799838-23799957,23800181-238003... 56 3e-08
02_04_0562 - 23886272-23886357,23886456-23886571,23887045-238871... 36 0.028
04_04_0378 - 24822436-24822521,24822623-24822738,24823010-248230... 34 0.086
02_01_0789 - 5919271-5919411,5920105-5920215,5920303-5920401,592... 33 0.20
12_01_0468 + 3661177-3661626 29 3.2
08_02_0095 - 12285976-12286037,12286111-12287229,12287494-122886... 29 4.3
07_03_1571 + 27811510-27811613,27812493-27812563,27812798-278128... 28 5.6
06_01_0646 + 4678422-4678508,4679042-4679123,4679236-4679327,467... 28 5.6
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 28 5.6
02_05_0986 - 33334205-33334362,33334487-33334662,33334774-333349... 28 5.6
06_03_0902 - 25806912-25807190,25807876-25808094,25809469-258097... 28 7.5
03_05_0175 + 21513767-21513903,21534361-21535385,21537375-215375... 28 7.5
>02_02_0700 +
13058446-13058790,13059352-13059582,13060083-13060241,
13060483-13060635,13061619-13061702,13061847-13061915,
13062374-13062421,13062487-13062621
Length = 407
Score = 173 bits (422), Expect = 8e-44
Identities = 82/97 (84%), Positives = 91/97 (93%)
Frame = +3
Query: 303 LEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSN 482
+EF+E+QEEY+KDEQ+NLK+E L AQEEVKRIQSVPLVIGQF+E VD N GIVGSTTGSN
Sbjct: 1 MEFVEIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDGNNGIVGSTTGSN 60
Query: 483 YYVRILSTIDRELLKPSASVALHKHSNALXDVLPPEA 593
YYVRILSTI+RELLKPSASVALH+HSNAL DVLPPEA
Sbjct: 61 YYVRILSTINRELLKPSASVALHRHSNALVDVLPPEA 97
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 595 DSSISMLQADXKPDVQYSDI 654
DSSIS+L + KP+V Y+DI
Sbjct: 98 DSSISLLGSSEKPNVTYTDI 117
>07_03_1770 -
29382508-29382591,29382901-29383041,29383134-29383520,
29383685-29383930,29385396-29385437,29385973-29386461
Length = 462
Score = 61.3 bits (142), Expect = 7e-10
Identities = 28/90 (31%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = +3
Query: 288 KLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQE--EVKRIQSVPLVIGQFLEAVDQNTGIV 461
KL+R+ ++L ++EE++ ++R E ++ +V ++ P+ +G E +D++ IV
Sbjct: 72 KLERVKDYLLMEEEFVAAQERLRPTEDKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIV 131
Query: 462 GSTTGSNYYVRILSTIDRELLKPSASVALH 551
S+ G YYV ILS +D++ L+P S+ +H
Sbjct: 132 SSSVGPEYYVGILSFVDKDQLEPGCSILMH 161
>03_02_0691 +
10432615-10433109,10433155-10433216,10433526-10433565,
10434562-10434807,10435020-10435189,10435323-10435539,
10435615-10435755,10435943-10436026
Length = 484
Score = 60.9 bits (141), Expect = 9e-10
Identities = 27/90 (30%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = +3
Query: 288 KLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQE--EVKRIQSVPLVIGQFLEAVDQNTGIV 461
KL+R+ ++L ++EE++ ++R E ++ +V ++ P+ +G E +D++ IV
Sbjct: 74 KLERVKDYLLMEEEFVVSQERLRPSEDKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIV 133
Query: 462 GSTTGSNYYVRILSTIDRELLKPSASVALH 551
S+ G YYV ILS +D++ L+P ++ +H
Sbjct: 134 SSSVGPEYYVGILSFVDKDQLEPGCAILMH 163
>02_01_0754 -
5595813-5595887,5595973-5596071,5596136-5596327,
5596992-5597129,5597415-5597501,5597583-5597669,
5597795-5597956,5598089-5598225,5598483-5598602,
5600668-5600773
Length = 400
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/105 (28%), Positives = 54/105 (51%)
Frame = +3
Query: 276 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTG 455
T+Y+K LE + +++ +N KK++ ++++K +QSV +IG+ L +D
Sbjct: 17 TEYRKKLLNCRELESRVSTVRENLKNAKKDFTKTEDDLKSLQSVGQIIGEVLRPLDNERF 76
Query: 456 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALXDVLPPE 590
IV +++G Y V S +D+E L V L + + LP E
Sbjct: 77 IVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRTLPRE 121
>09_06_0271 + 21959213-21960559
Length = 448
Score = 55.6 bits (128), Expect = 3e-08
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Frame = +3
Query: 249 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV-PLVIGQ 425
D+ E L K + L+R L+ Q + + L++ +E V+R+ +V PLV+ Q
Sbjct: 52 DDEEGRQLREKLESLEREFCLLDEQRDNALFQIHVLEETVRFREELVRRLTAVTPLVVAQ 111
Query: 426 FLEAVDQNTGIV--GSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALXDVLPPE 590
E VD++ +V G V + ++DR LLKPSA+VAL+ S AL V P +
Sbjct: 112 LDEVVDEHHAVVTLGDGCERKMCVGVAGSLDRGLLKPSANVALNGRSLALVGVPPSD 168
>06_03_0711 +
23798998-23799106,23799838-23799957,23800181-23800317,
23800418-23800579,23800707-23800793,23800872-23800958,
23801317-23801454,23802023-23802214,23802287-23802385,
23802490-23802564
Length = 401
Score = 55.6 bits (128), Expect = 3e-08
Identities = 31/105 (29%), Positives = 52/105 (49%)
Frame = +3
Query: 276 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTG 455
T Y+K LE + +D +N KK++ ++++K +QSV +IG+ L +D
Sbjct: 18 TDYRKKLLTCRELEARARTARDNLKNAKKDFGKTEDDLKSLQSVGQIIGEVLRPLDSERF 77
Query: 456 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALXDVLPPE 590
IV +++G Y V S +D+E L V L + + LP E
Sbjct: 78 IVKASSGPRYVVGCRSKVDKEKLIAGTRVVLDMTTLTIMRTLPRE 122
>02_04_0562 -
23886272-23886357,23886456-23886571,23887045-23887127,
23887683-23887829,23887946-23887993,23888166-23888384,
23889370-23889541,23889636-23889700,23890386-23890512,
23891358-23891450,23891520-23891629,23891722-23891868,
23892161-23892473,23892580-23893178
Length = 774
Score = 35.9 bits (79), Expect = 0.028
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +3
Query: 255 LESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKR 395
L SED ++ + R LEFLE+QEE IK+E++ +KE QE+ ++
Sbjct: 518 LPSEDSVSERR---RKLEFLEMQEELIKEEEKKKEKEEKAKQEKEEK 561
>04_04_0378 -
24822436-24822521,24822623-24822738,24823010-24823092,
24823772-24823918,24824004-24824051,24824153-24824353,
24824981-24825152,24825235-24825299,24825813-24825939,
24826436-24826528,24826608-24826696,24826804-24826950,
24827047-24827359,24827474-24828048
Length = 753
Score = 34.3 bits (75), Expect = 0.086
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 255 LESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKE 365
L SED + K R LEFLE+QEE IK+E++ +KE
Sbjct: 503 LPSEDSVSDRK---RKLEFLEMQEELIKEEEKRQEKE 536
>02_01_0789 -
5919271-5919411,5920105-5920215,5920303-5920401,
5920486-5920642,5920774-5920937,5921017-5921079,
5921153-5921377,5922038-5922135,5923283-5923499
Length = 424
Score = 33.1 bits (72), Expect = 0.20
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = +3
Query: 339 DEQRN-LKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDR 515
+ QRN L +EE++ +Q +G+ ++ + ++ +V Y V I +ID
Sbjct: 63 EAQRNDLNSRVRMLREELQLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDIDKSIDI 122
Query: 516 ELLKPSASVALHKHSNALXDVLPPEARQL 602
+ PS VAL S L +LP + L
Sbjct: 123 TKITPSTRVALRNDSYMLHLILPSKVDPL 151
>12_01_0468 + 3661177-3661626
Length = 149
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 249 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEV-KRIQSVPLVIGQ 425
+E+E E+ + + ++ E E++EE +K+E+ L+++ A EEV + Q V+
Sbjct: 72 EEVEEEEDIEEEEVVEEEEE--EIEEEEVKEEEEELREQVQEAGEEVNEEQQGADGVVQS 129
Query: 426 FLEAVDQNT 452
L D N+
Sbjct: 130 MLMPTDINS 138
>08_02_0095 -
12285976-12286037,12286111-12287229,12287494-12288604,
12288695-12288757,12288851-12288913,12289268-12289318,
12289538-12289617,12290078-12290164,12290349-12290435,
12290889-12290975,12292106-12292308,12292756-12292922
Length = 1059
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 141 NLLAIETMEEIGIILPEKDDQVTDSKGLAFAGPQSFDELESEDL 272
N A ET+EEI I E+ + + +S + + P S +EL ED+
Sbjct: 311 NGTAQETVEEIQIQQTEQHETMPESNETSNSEPNSREELNEEDI 354
>07_03_1571 +
27811510-27811613,27812493-27812563,27812798-27812889,
27812963-27813022,27813130-27813351,27813450-27813526,
27813618-27813687,27813793-27813906,27813985-27814051,
27814259-27814363,27814470-27814594
Length = 368
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = +3
Query: 309 FLEVQEEYIKDEQRNL-KKEYLHAQ-EEVKRIQSVPLVIGQFLEAVDQN--TGIVGSTTG 476
+LE++ +E + + K+ Y++A + +K +++V +V+ D+ + + G T
Sbjct: 101 YLEIRTTPKNNEAKGMTKRSYMNAVIKGLKTVEAVEVVLFDSNSRADKTPMSELGGDTRK 160
Query: 477 SNYYVRILSTIDR 515
YVR+L +IDR
Sbjct: 161 KKIYVRLLLSIDR 173
>06_01_0646 +
4678422-4678508,4679042-4679123,4679236-4679327,
4679441-4679518,4679635-4679696,4680272-4680993,
4681115-4681272
Length = 426
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 589 KPDSSISMLQADXKPDVQYSDI 654
K D S++M+ + KPDV Y+D+
Sbjct: 149 KIDPSVTMMTVEEKPDVTYNDV 170
>03_02_0568 +
9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 285 KKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKR 395
K ++ +E+LE Q + +K + KKEYL +E R
Sbjct: 389 KTMRDKIEYLETQNKELKMNIESCKKEYLDLEEAHSR 425
>02_05_0986 -
33334205-33334362,33334487-33334662,33334774-33334955,
33335064-33335282,33335407-33335551,33336127-33336188,
33336282-33336359,33336517-33336608,33337086-33337167,
33337519-33337605
Length = 426
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 589 KPDSSISMLQADXKPDVQYSDI 654
K D S++M+ + KPDV Y+D+
Sbjct: 149 KIDPSVTMMTVEEKPDVTYNDV 170
>06_03_0902 -
25806912-25807190,25807876-25808094,25809469-25809711,
25809810-25809974,25810141-25810721,25810940-25811048,
25811158-25811250,25811474-25811535,25811895-25811967,
25812879-25813007,25814107-25814229
Length = 691
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = +3
Query: 258 ESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNL--KKEYLHAQEEVKR--IQSVPLVIGQ 425
+ ++LY KY +++ L+ + ++ ++ E+ +KE L + E KR ++S+ IG+
Sbjct: 426 DKDELYRKYSEMESNLKIEQNEKTRVQSEKTTASGEKEMLLEELETKRKEVESLQQHIGE 485
Query: 426 F 428
F
Sbjct: 486 F 486
>03_05_0175 +
21513767-21513903,21534361-21535385,21537375-21537547,
21537849-21538679
Length = 721
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/52 (28%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +3
Query: 249 DELESEDLYTKYK-KLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 401
+E+E E++ + + + + + E +E +EE I++E+ +++E A EEV Q
Sbjct: 56 EEVEEEEVEEEEEIEEEEVEEEIEEEEEEIEEEEEEVREEVQEAGEEVDEEQ 107
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,328,356
Number of Sequences: 37544
Number of extensions: 254841
Number of successful extensions: 711
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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