Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_M08
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 171 5e-43
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 67 9e-12
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 49 3e-06
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 49 3e-06
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 39 0.004
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 39 0.004
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 34 0.077
AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cycl... 34 0.10
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z81067-5|CAD92378.1| 965|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z75550-10|CAA99927.2| 444|Caenorhabditis elegans Hypothetical p... 29 2.9
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 29 2.9
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 29 2.9
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 2.9
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 2.9
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 2.9
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 2.9
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 29 2.9
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 29 2.9
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 29 2.9
Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical p... 29 3.8
Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical p... 29 3.8
Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical pr... 29 3.8
U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical pr... 29 3.8
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein. 29 3.8
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 28 5.0
Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr... 28 6.7
X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic int... 28 6.7
Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 27 8.8
U80023-2|AAG24035.1| 204|Caenorhabditis elegans Hypothetical pr... 27 8.8
U55854-8|AAK68159.1| 131|Caenorhabditis elegans Hypothetical pr... 27 8.8
U14521-1|AAA64269.1| 360|Caenorhabditis elegans ppp-1 protein. 27 8.8
AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical ... 27 8.8
AF025458-1|AAB70977.2| 384|Caenorhabditis elegans Hypothetical ... 27 8.8
AF024492-4|AAF98617.1| 848|Caenorhabditis elegans Hypothetical ... 27 8.8
AF016452-18|AAB66009.1| 405|Caenorhabditis elegans Hypothetical... 27 8.8
AC006608-3|AAF39757.1| 404|Caenorhabditis elegans Pyrophosphory... 27 8.8
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 171 bits (415), Expect = 5e-43
Identities = 85/111 (76%), Positives = 92/111 (82%)
Frame = +3
Query: 261 SEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAV 440
S D Y K L+R L L+V E+YIK E RNL+KE LHAQEEVKRIQSVPLVIGQFLEAV
Sbjct: 33 SSDDYIKLTTLERQLAHLQVMEDYIKLETRNLEKELLHAQEEVKRIQSVPLVIGQFLEAV 92
Query: 441 DQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALXDVLPPEA 593
DQN IVGSTTGSNYYVR+LS +DRELLKP SVALHK+SNAL DVLPPEA
Sbjct: 93 DQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEA 143
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 595 DSSISMLQADXKPDVQYSDI 654
DSSI ML+ D KPD+ Y DI
Sbjct: 144 DSSIQMLRPDEKPDISYGDI 163
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 67.3 bits (157), Expect = 9e-12
Identities = 32/103 (31%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +3
Query: 279 KYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVK--RIQSVPLVIGQFLEAVDQNT 452
K K +R+ ++L +++E+I++++R +E +E K ++ P+ +G E +D
Sbjct: 64 KLLKSERIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQH 123
Query: 453 GIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALXDVL 581
IV + GS +YV I+S +D+E L+P SV L+ ++A+ VL
Sbjct: 124 AIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVL 166
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 48.8 bits (111), Expect = 3e-06
Identities = 29/123 (23%), Positives = 64/123 (52%)
Frame = +3
Query: 234 GPQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPL 413
GP ++ ++ L + +KL + +E + + ++ ++ + K++ ++ ++K +QSV
Sbjct: 6 GPAIVEDERTKALNSYRRKLAECRD-IEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQ 64
Query: 414 VIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALXDVLPPEA 593
++G+ L+ + + IV +T G Y V +I++E LK V+L + + LP E
Sbjct: 65 IVGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREV 124
Query: 594 RQL 602
L
Sbjct: 125 DPL 127
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 48.8 bits (111), Expect = 3e-06
Identities = 29/123 (23%), Positives = 64/123 (52%)
Frame = +3
Query: 234 GPQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPL 413
GP ++ ++ L + +KL + +E + + ++ ++ + K++ ++ ++K +QSV
Sbjct: 14 GPAIVEDERTKALNSYRRKLAECRD-IEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQ 72
Query: 414 VIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALXDVLPPEA 593
++G+ L+ + + IV +T G Y V +I++E LK V+L + + LP E
Sbjct: 73 IVGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREV 132
Query: 594 RQL 602
L
Sbjct: 133 DPL 135
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/109 (20%), Positives = 50/109 (45%)
Frame = +3
Query: 276 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTG 455
TK ++ ++ + + + +Q+ L + +EE+ + +G+ +A+D+
Sbjct: 31 TKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAMDKKKV 90
Query: 456 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALXDVLPPEARQL 602
+V + Y V + +++D L VAL + A+ +VLP + L
Sbjct: 91 LVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPL 139
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/109 (20%), Positives = 50/109 (45%)
Frame = +3
Query: 276 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTG 455
TK ++ ++ + + + +Q+ L + +EE+ + +G+ +A+D+
Sbjct: 52 TKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAMDKKKV 111
Query: 456 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALXDVLPPEARQL 602
+V + Y V + +++D L VAL + A+ +VLP + L
Sbjct: 112 LVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPL 160
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 37.9 bits (84), Expect = 0.006
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Frame = +3
Query: 288 KLQRMLEFLEVQEEYIKDEQ----RNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTG 455
K+ R+ ++L++++E+I + R L + Q+ V+ ++ P + + E D
Sbjct: 52 KMNRIHDYLQLEKEFITRQTSRHGRPLAVQKRREQQLVQSLRGTPTTLARVHELFDDEKH 111
Query: 456 IVGSTTGSN--YYVRILSTIDRELLKPSASV 542
V GS +YV ILS +D++LL+ +A V
Sbjct: 112 AVVVVEGSRREWYVPILSIVDKDLLRLNALV 142
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 34.3 bits (75), Expect = 0.077
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 345 QRN-LKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDREL 521
QRN L + +EE++++ +G+ +A+D+ +V Y V + +ID
Sbjct: 58 QRNELNTKVRMLKEELQQLHEQGSYVGEVSKAMDKKKVLVKVHPEGKYVVDVDKSIDINS 117
Query: 522 LKPSASVALHKHSNALXDVLP 584
L A VAL S AL +LP
Sbjct: 118 LNTGARVALRADSYALHKLLP 138
>AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cyclase
protein 4 protein.
Length = 954
Score = 33.9 bits (74), Expect = 0.10
Identities = 23/87 (26%), Positives = 42/87 (48%)
Frame = +3
Query: 303 LEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSN 482
+E L + E I D + L + + +EE K+I+ + + ++ A +G+ G G N
Sbjct: 780 VECLRLLNEIISDFDQIL--DQILDREEFKKIEKIKTISTTYMVA----SGLAGRECGDN 833
Query: 483 YYVRILSTIDRELLKPSASVALHKHSN 563
+V ++ RELL S +H +N
Sbjct: 834 SHVEAIALFARELLVKLESTNIHSFNN 860
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 30.7 bits (66), Expect = 0.94
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 589 KPDSSISMLQADXKPDVQYSDI 654
K D +++M+Q + KPDV YSD+
Sbjct: 158 KIDPTVTMMQVEEKPDVTYSDV 179
>Z81067-5|CAD92378.1| 965|Caenorhabditis elegans Hypothetical
protein F23A7.7 protein.
Length = 965
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -3
Query: 238 GPANAKPFESVTWSSFSGKIIPISSIVSIAKRFRVLS 128
G N F WS+F K + SI S+ RFR LS
Sbjct: 436 GNINTALFTKGKWSTFFPKSLNFGSIPSLPSRFRTLS 472
>Z75550-10|CAA99927.2| 444|Caenorhabditis elegans Hypothetical
protein T22C1.11 protein.
Length = 444
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 318 VQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIG 422
V+EE + E+ ++ KEY A + V +++ + LV+G
Sbjct: 216 VEEEVAQIEEEDVSKEYFDASKFVAQLEEMGLVLG 250
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 267 DLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 404
++ K + + +++E EE DE N+K L QE+++R+Q+
Sbjct: 1418 EMIKKAQHIDQLMEMEPQLEELHPDELENIKAHRLAVQEQLQRLQA 1463
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 267 DLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 404
++ K + + +++E EE DE N+K L QE+++R+Q+
Sbjct: 1418 EMIKKAQHIDQLMEMEPQLEELHPDELENIKAHRLAVQEQLQRLQA 1463
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 297 RMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 401
RM E ++ E + +E LK ++LH +EEV+R++
Sbjct: 822 RMNELTKIHE-MLMEEHDQLKVDHLHTEEEVERLK 855
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 297 RMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 401
RM E ++ E + +E LK ++LH +EEV+R++
Sbjct: 822 RMNELTKIHE-MLMEEHDQLKVDHLHTEEEVERLK 855
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 297 RMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 401
RM E ++ E + +E LK ++LH +EEV+R++
Sbjct: 582 RMNELTKIHE-MLMEEHDQLKVDHLHTEEEVERLK 615
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 297 RMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 401
RM E ++ E + +E LK ++LH +EEV+R++
Sbjct: 822 RMNELTKIHE-MLMEEHDQLKVDHLHTEEEVERLK 855
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 267 DLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 404
++ K + + +++E EE DE N+K L QE+++R+Q+
Sbjct: 1418 EMIKKAQHIDQLMEMEPQLEELHPDELENIKAHRLAVQEQLQRLQA 1463
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 267 DLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 404
++ K + + +++E EE DE N+K L QE+++R+Q+
Sbjct: 1418 EMIKKAQHIDQLMEMEPQLEELHPDELENIKAHRLAVQEQLQRLQA 1463
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 267 DLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 404
++ K + + +++E EE DE N+K L QE+++R+Q+
Sbjct: 1418 EMIKKAQHIDQLMEMEPQLEELHPDELENIKAHRLAVQEQLQRLQA 1463
>Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical
protein ZK1098.10d protein.
Length = 1185
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 249 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQ--RNLKKEYLHAQEEVKRIQSVPLVI 419
DEL SE++ + + L R + ++QE+ K E+ + LK++ + + E + VP+ +
Sbjct: 365 DELNSENMILRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE-DDVPMAM 422
>Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical
protein ZK1098.10b protein.
Length = 1157
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 249 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQ--RNLKKEYLHAQEEVKRIQSVPLVI 419
DEL SE++ + + L R + ++QE+ K E+ + LK++ + + E + VP+ +
Sbjct: 365 DELNSENMILRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE-DDVPMAM 422
>Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical
protein ZK1098.10a protein.
Length = 1139
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 249 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQ--RNLKKEYLHAQEEVKRIQSVPLVI 419
DEL SE++ + + L R + ++QE+ K E+ + LK++ + + E + VP+ +
Sbjct: 347 DELNSENMILRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE-DDVPMAM 404
>U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical
protein T05A12.4b protein.
Length = 975
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 406 TDCMRFTSSCACKYSFFKFRCSSLMYSSCTSKNSN 302
++C + S+ C + F KF+ S CTS++ N
Sbjct: 389 SNCSQMCSAKICGWDFDKFKNEKFQCSKCTSESEN 423
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical
protein T05A12.4a protein.
Length = 1622
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 406 TDCMRFTSSCACKYSFFKFRCSSLMYSSCTSKNSN 302
++C + S+ C + F KF+ S CTS++ N
Sbjct: 389 SNCSQMCSAKICGWDFDKFKNEKFQCSKCTSESEN 423
>AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein.
Length = 1157
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 249 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQ--RNLKKEYLHAQEEVKRIQSVPLVI 419
DEL SE++ + + L R + ++QE+ K E+ + LK++ + + E + VP+ +
Sbjct: 365 DELNSENMILRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE-DDVPMAM 422
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 252 ELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKK--EYLHAQEEVKRIQ 401
E E+E+ K ++ +E ++ +EE +K E+ +KK E L A+EE +++
Sbjct: 889 EKEAEEENEKLIPERKRMEAIKEEEERVKAEREKVKKEEERLKAEEEKVKVE 940
>Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical
protein W10G6.3 protein.
Length = 581
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +3
Query: 249 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 401
D L+ +DL L+ + L+ + +++E LKKE E++R++
Sbjct: 170 DRLKIDDLLVTLSNLEAEINLLKRRIALLEEEVARLKKENFRLTSELQRVR 220
>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical
protein C23H4.6 protein.
Length = 1137
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +3
Query: 285 KKLQRMLEFLEVQEEYIKDEQR---NLKKEYLHAQEEVKRIQS 404
KKLQ + + +EVQ+E IK+ + NL+K + E+K +S
Sbjct: 324 KKLQELRDEVEVQDEEIKESRADVDNLRKIVNDLKHEIKMSES 366
>X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +3
Query: 249 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 401
D L+ +DL L+ + L+ + +++E LKKE E++R++
Sbjct: 170 DRLKIDDLLVTLSNLEAEINLLKRRIALLEEEVARLKKENFRLTSELQRVR 220
>Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical
protein C31E10.8 protein.
Length = 1272
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Frame = +3
Query: 243 SFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRI----QSVP 410
+FDE ++ + L +E +Q +Y+ L+K+ A E VK I +
Sbjct: 613 AFDEEAIVNMAFRIPNLPTRIELKNMQLQYVNLLAERLEKKMRRANEFVKSIANNLTNEK 672
Query: 411 LVIGQFLEAVDQNTGIVGS 467
L+ F++ NTG + S
Sbjct: 673 LISNIFIDTFTPNTGFIVS 691
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
protein E01G6.1 protein.
Length = 1391
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 427 NCPMTRGTDCMRFTSSCACKYSFFKFRCSSLMYSSC 320
N M+RG C T Y K +CS +Y+ C
Sbjct: 467 NANMSRGNGCKGSTQRSMWFYDKSKKKCSQFVYNGC 502
>U80023-2|AAG24035.1| 204|Caenorhabditis elegans Hypothetical
protein F07C4.6 protein.
Length = 204
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -3
Query: 463 PTMPVF*STASRNCPMTRGTDCMRFTSSCACKYSFFKFRCSSLMYSSCTS 314
PT + A +CP T G C T SC F + C+S+ + C S
Sbjct: 88 PTSKDAKTAAIAHCPKTCGLCCQTSTYSCQ-NAPFPRLNCASVTKAMCLS 136
>U55854-8|AAK68159.1| 131|Caenorhabditis elegans Hypothetical
protein C04G6.11 protein.
Length = 131
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 440 NCLKKLSNDKRNRLYALYFFLCMQIFFLQVSLFIFNVLFL 321
+CLKK S + + FF C+ FFL S+F + +L
Sbjct: 89 DCLKK-SRRRLLSIKFFVFFFCLLPFFLSSSIFFLYLFYL 127
>U14521-1|AAA64269.1| 360|Caenorhabditis elegans ppp-1 protein.
Length = 360
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 113 NQIIIR*YTKSLSYRNNGRDWNYFT 187
N+ I + +T+ + YR NG+++NY T
Sbjct: 274 NKAIQKSFTRLMEYRGNGKNFNYKT 298
>AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical
protein Y43F4B.6 protein.
Length = 1083
Score = 27.5 bits (58), Expect = 8.8
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Frame = +3
Query: 126 SDSTRNLLAIETMEEIGIILPEKDDQVTDSKGLAFAGPQSFDELE---SED--LYTKYKK 290
S+ T+ ++ I +E L ++ +VT + LA Q +LE +ED + KK
Sbjct: 527 SEKTQLVVRISELETEMNKLRQEGKKVTTAAKLAEERRQKLKDLERQHAEDKKVLNDMKK 586
Query: 291 LQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEE 386
LQ +E + +DE +NLK + L E
Sbjct: 587 LQETRRRMEETLKKTEDELKNLKTQRLRLLRE 618
>AF025458-1|AAB70977.2| 384|Caenorhabditis elegans Hypothetical
protein C01B12.4 protein.
Length = 384
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -2
Query: 434 LKKLSNDK-RNRLYALYFFLCMQIFFLQVSLFIFN-VLFLY 318
LK +SN++ RN +YAL F + F V +FI +FLY
Sbjct: 59 LKYVSNERIRNDMYALIFMFPITTFASLVGMFIPRAAIFLY 99
>AF024492-4|AAF98617.1| 848|Caenorhabditis elegans Hypothetical
protein F14F9.3 protein.
Length = 848
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/65 (21%), Positives = 35/65 (53%)
Frame = +3
Query: 243 SFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIG 422
+F+ +E E L TKY L + EFL+ + +++ K + ++++++++ +I
Sbjct: 252 AFEVIEKEKLVTKYTSLLNIQEFLKTEGYTLENADIIFKNMEVKFEKQMEQLREDETLIT 311
Query: 423 QFLEA 437
+ L +
Sbjct: 312 KRLRS 316
>AF016452-18|AAB66009.1| 405|Caenorhabditis elegans Hypothetical
protein T05H4.2 protein.
Length = 405
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3
Query: 213 SKGLAFAGPQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLK 359
S GL G ELE ED YKK + +++ + E +KD R LK
Sbjct: 154 SVGLKTNGGYVTYELEDEDCQVNYKKRKMIVKDKKPLEVAMKDVSRLLK 202
>AC006608-3|AAF39757.1| 404|Caenorhabditis elegans
Pyrophosphorylase family protein 1 protein.
Length = 404
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 113 NQIIIR*YTKSLSYRNNGRDWNYFT 187
N+ I + +T+ + YR NG+++NY T
Sbjct: 274 NKAIQKSFTRLMEYRGNGKNFNYKT 298
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,301,599
Number of Sequences: 27780
Number of extensions: 260757
Number of successful extensions: 926
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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