Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_L19
(563 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY254380-1|AAP13073.1| 2612|Homo sapiens E3 ligase for inhibin r... 212 8e-55
BC041791-1|AAH41791.1| 696|Homo sapiens RHOBTB1 protein protein. 33 0.92
BC032848-1|AAH32848.1| 696|Homo sapiens RHOBTB1 protein protein. 33 0.92
AK075129-1|BAC11421.1| 696|Homo sapiens protein ( Homo sapiens ... 33 0.92
AB018283-1|BAA34460.2| 696|Homo sapiens KIAA0740 protein protein. 33 0.92
U97669-1|AAB91371.1| 2321|Homo sapiens Notch3 protein. 30 6.5
AF058900-1|AAC14346.1| 2321|Homo sapiens Notch3 protein. 30 6.5
AC004663-1|AAC15789.1| 2281|Homo sapiens Notch 3 protein. 30 6.5
AB209447-1|BAD92684.1| 1289|Homo sapiens Notch homolog 3 variant... 30 6.5
BX255925-4|CAM24149.1| 580|Homo sapiens cofactor of BRCA1 (COBR... 29 8.5
BC011892-1|AAH11892.1| 475|Homo sapiens COBRA1 protein protein. 29 8.5
AK022651-1|BAB14157.1| 475|Homo sapiens protein ( Homo sapiens ... 29 8.5
AF464935-1|AAL69965.1| 580|Homo sapiens cofactor of BRCA1 protein. 29 8.5
AB033008-1|BAA86496.1| 210|Homo sapiens KIAA1182 protein protein. 29 8.5
>AY254380-1|AAP13073.1| 2612|Homo sapiens E3 ligase for inhibin
receptor protein.
Length = 2612
Score = 212 bits (517), Expect = 8e-55
Identities = 96/110 (87%), Positives = 105/110 (95%)
Frame = +2
Query: 194 MAEVDPETLLEWLLTGQGDERDMQLIALEQLCMLLLMSDNVDRCFESCPPRTFLPALCKI 373
MA+VDP+TLLEWL GQGDERDMQLIALEQLCMLLLMSDNVDRCFE+CPPRTFLPALCKI
Sbjct: 1 MADVDPDTLLEWLQMGQGDERDMQLIALEQLCMLLLMSDNVDRCFETCPPRTFLPALCKI 60
Query: 374 FLDECAPDNVLEVTARAITYYLDVSAECTRRIVXIEGAVKAICNRLLTVD 523
FLDE APDNVLEVTARAITYYLDVSAECTRRIV ++GA+KA+CNRL+ V+
Sbjct: 61 FLDESAPDNVLEVTARAITYYLDVSAECTRRIVGVDGAIKALCNRLVVVE 110
>BC041791-1|AAH41791.1| 696|Homo sapiens RHOBTB1 protein protein.
Length = 696
Score = 32.7 bits (71), Expect = 0.92
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 215 TLLEWLLTGQGDERDMQLIALEQLCMLLLMSD 310
TLL++L TGQ DE++ L+ L Q+ +L M D
Sbjct: 413 TLLQFLYTGQLDEKEKDLVGLAQIAEVLEMFD 444
>BC032848-1|AAH32848.1| 696|Homo sapiens RHOBTB1 protein protein.
Length = 696
Score = 32.7 bits (71), Expect = 0.92
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 215 TLLEWLLTGQGDERDMQLIALEQLCMLLLMSD 310
TLL++L TGQ DE++ L+ L Q+ +L M D
Sbjct: 413 TLLQFLYTGQLDEKEKDLVGLAQIAEVLEMFD 444
>AK075129-1|BAC11421.1| 696|Homo sapiens protein ( Homo sapiens
cDNA FLJ90648 fis, clone PLACE1004305, weakly similar to
RAS-RELATED PROTEIN RAC1. ).
Length = 696
Score = 32.7 bits (71), Expect = 0.92
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 215 TLLEWLLTGQGDERDMQLIALEQLCMLLLMSD 310
TLL++L TGQ DE++ L+ L Q+ +L M D
Sbjct: 413 TLLQFLYTGQLDEKEKDLVGLAQIAEVLEMFD 444
>AB018283-1|BAA34460.2| 696|Homo sapiens KIAA0740 protein protein.
Length = 696
Score = 32.7 bits (71), Expect = 0.92
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 215 TLLEWLLTGQGDERDMQLIALEQLCMLLLMSD 310
TLL++L TGQ DE++ L+ L Q+ +L M D
Sbjct: 413 TLLQFLYTGQLDEKEKDLVGLAQIAEVLEMFD 444
>U97669-1|AAB91371.1| 2321|Homo sapiens Notch3 protein.
Length = 2321
Score = 29.9 bits (64), Expect = 6.5
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2
Query: 308 DNVDRCFESCPPRTFLPALCKIFLDECAPDNVLEVTARAI 427
D V R SCPP T L LC+I D+C P L+ R +
Sbjct: 1139 DLVARYLCSCPPGT-LGVLCEINEDDCGPGPPLDSGPRCL 1177
>AF058900-1|AAC14346.1| 2321|Homo sapiens Notch3 protein.
Length = 2321
Score = 29.9 bits (64), Expect = 6.5
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2
Query: 308 DNVDRCFESCPPRTFLPALCKIFLDECAPDNVLEVTARAI 427
D V R SCPP T L LC+I D+C P L+ R +
Sbjct: 1139 DLVARYLCSCPPGT-LGVLCEINEDDCGPGPPLDSGPRCL 1177
>AC004663-1|AAC15789.1| 2281|Homo sapiens Notch 3 protein.
Length = 2281
Score = 29.9 bits (64), Expect = 6.5
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2
Query: 308 DNVDRCFESCPPRTFLPALCKIFLDECAPDNVLEVTARAI 427
D V R SCPP T L LC+I D+C P L+ R +
Sbjct: 1099 DLVARYLCSCPPGT-LGVLCEINEDDCGPGPPLDSGPRCL 1137
>AB209447-1|BAD92684.1| 1289|Homo sapiens Notch homolog 3 variant
protein.
Length = 1289
Score = 29.9 bits (64), Expect = 6.5
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2
Query: 308 DNVDRCFESCPPRTFLPALCKIFLDECAPDNVLEVTARAI 427
D V R SCPP T L LC+I D+C P L+ R +
Sbjct: 1090 DLVARYLCSCPPGT-LGVLCEINEDDCGPGPPLDSGPRCL 1128
>BX255925-4|CAM24149.1| 580|Homo sapiens cofactor of BRCA1 (COBRA1)
protein.
Length = 580
Score = 29.5 bits (63), Expect = 8.5
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = -1
Query: 392 VHIHPKKSCTKLEEMFLVDSFQNTCXHYQTLVEAYTAVQE--Q*VAYHVHHPAQSAATPV 219
+H+HP+ + +KLE L + + T + + E Y+ + E + + + PAQ+A TP
Sbjct: 509 IHLHPRVAPSKLEA--LQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPA 566
Query: 218 MSLD-PLLPS 192
+ L P +P+
Sbjct: 567 LELPLPSVPA 576
>BC011892-1|AAH11892.1| 475|Homo sapiens COBRA1 protein protein.
Length = 475
Score = 29.5 bits (63), Expect = 8.5
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = -1
Query: 392 VHIHPKKSCTKLEEMFLVDSFQNTCXHYQTLVEAYTAVQE--Q*VAYHVHHPAQSAATPV 219
+H+HP+ + +KLE L + + T + + E Y+ + E + + + PAQ+A TP
Sbjct: 404 IHLHPRVAPSKLEA--LQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPA 461
Query: 218 MSLD-PLLPS 192
+ L P +P+
Sbjct: 462 LELPLPSVPA 471
>AK022651-1|BAB14157.1| 475|Homo sapiens protein ( Homo sapiens
cDNA FLJ12589 fis, clone NT2RM4001258. ).
Length = 475
Score = 29.5 bits (63), Expect = 8.5
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = -1
Query: 392 VHIHPKKSCTKLEEMFLVDSFQNTCXHYQTLVEAYTAVQE--Q*VAYHVHHPAQSAATPV 219
+H+HP+ + +KLE L + + T + + E Y+ + E + + + PAQ+A TP
Sbjct: 404 IHLHPRVAPSKLEA--LQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPA 461
Query: 218 MSLD-PLLPS 192
+ L P +P+
Sbjct: 462 LELPLPSVPA 471
>AF464935-1|AAL69965.1| 580|Homo sapiens cofactor of BRCA1 protein.
Length = 580
Score = 29.5 bits (63), Expect = 8.5
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = -1
Query: 392 VHIHPKKSCTKLEEMFLVDSFQNTCXHYQTLVEAYTAVQE--Q*VAYHVHHPAQSAATPV 219
+H+HP+ + +KLE L + + T + + E Y+ + E + + + PAQ+A TP
Sbjct: 509 IHLHPRVAPSKLEA--LQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPA 566
Query: 218 MSLD-PLLPS 192
+ L P +P+
Sbjct: 567 LELPLPSVPA 576
>AB033008-1|BAA86496.1| 210|Homo sapiens KIAA1182 protein protein.
Length = 210
Score = 29.5 bits (63), Expect = 8.5
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = -1
Query: 392 VHIHPKKSCTKLEEMFLVDSFQNTCXHYQTLVEAYTAVQE--Q*VAYHVHHPAQSAATPV 219
+H+HP+ + +KLE L + + T + + E Y+ + E + + + PAQ+A TP
Sbjct: 139 IHLHPRVAPSKLEA--LQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPA 196
Query: 218 MSLD-PLLPS 192
+ L P +P+
Sbjct: 197 LELPLPSVPA 206
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,340,335
Number of Sequences: 237096
Number of extensions: 1654742
Number of successful extensions: 6318
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6318
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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