Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_K19
         (627 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0289 + 13972020-13972077,13972444-13973301,13973850-139742...    30   1.7  
04_01_0283 + 3768732-3768792,3769235-3769876,3769907-3770076,377...    30   1.7  
01_06_0322 + 28472680-28473053,28474434-28474470,28474578-284748...    29   3.0  
12_01_0398 - 3143745-3143777,3144045-3144126,3144863-3144975,314...    28   5.3  
03_06_0676 - 35460281-35460648,35462097-35462382                       28   5.3  
10_01_0171 + 1917520-1918056,1919201-1919336,1921873-1922060,192...    28   7.0  
05_03_0316 + 12242823-12242964,12243032-12243282,12243370-122435...    27   9.2  

>04_03_0289 +
           13972020-13972077,13972444-13973301,13973850-13974235,
           13974249-13974323,13975824-13976139,13976284-13977113
          Length = 840

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
 Frame = +2

Query: 218 LWLSIIMQAFCNTTHETVKKK-RNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKEL 394
           L +S+     C      ++K+ R + F+K   ++L + I+ ++N T   +IF   + ++ 
Sbjct: 485 LLVSLSATFICRRWKRDIQKQLRRKHFQKNQGLLLEQLILSDQNATDKTKIFSLEELEKA 544

Query: 395 DQGFRHRRPFVLSKHFFEYKDDVKKTELYKLITKMPKGAVLHAHDTS 535
              F   R      H   YK+      +Y  I       VLH+  +S
Sbjct: 545 TNNFDSTRILGRGGHGMVYKETEVPLLVYDFIPNGSLFGVLHSGSSS 591


>04_01_0283 +
           3768732-3768792,3769235-3769876,3769907-3770076,
           3770134-3770511,3770602-3770991
          Length = 546

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 19/73 (26%), Positives = 35/73 (47%)
 Frame = +2

Query: 251 NTTHETVKKKRNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKELDQGFRHRRPFVL 430
           +T +E + K   +L  K  E+   +D+V +ENE K ++   ++K  +   G         
Sbjct: 203 DTQNEEITKDLEDLKTKLEEIKTNKDLVESENEEKYSQSEAEIKYLKQVMGAVVEAKEAA 262

Query: 431 SKHFFEYKDDVKK 469
           +K F   K+D+ K
Sbjct: 263 AKAFAAEKEDIMK 275


>01_06_0322 +
           28472680-28473053,28474434-28474470,28474578-28474814,
           28474891-28474938,28475263-28475661
          Length = 364

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +2

Query: 449 YKDDVKKTELYKLITKMP--KGAVLHAHDTSLLGPDYVLKLTYWKDLY 586
           Y   V       L +++P  +G VLH+   S L   Y +K TYW D+Y
Sbjct: 168 YGQSVGSGPTIDLASRLPNLRGVVLHSPILSGLRVLYPVKRTYWFDIY 215


>12_01_0398 -
           3143745-3143777,3144045-3144126,3144863-3144975,
           3145072-3145152,3145517-3145569,3146042-3146150,
           3147512-3147571,3147689-3147771,3147913-3148086,
           3148133-3148172
          Length = 275

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +2

Query: 317 LGRDIVLNENETK-VNEIFMKLKTKELDQGFRHRRPFVLSKHFFEYKDDVKKTELYKLIT 493
           L R+ V N NE + + E+F K+ +  +D G  ++  F L+      KD +    ++ L  
Sbjct: 66  LARETVFNVNEIEALYELFKKISSAVVDDGLINKEEFQLALFKTNRKDSMFADRVFDLFD 125

Query: 494 KMPKG 508
               G
Sbjct: 126 TKHNG 130


>03_06_0676 - 35460281-35460648,35462097-35462382
          Length = 217

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +2

Query: 230 IIMQAFCNTTHETVKKKR--NELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKELD 397
           I ++   NT+ E V+K +  N LF ++ E        L++   K+NE   KLK++  D
Sbjct: 116 ITLRKAANTSREEVEKLQMENRLFREKEEKSSSEIKKLHQEIAKLNESMKKLKSESED 173


>10_01_0171 +
           1917520-1918056,1919201-1919336,1921873-1922060,
           1922491-1922694,1923913-1924425
          Length = 525

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -1

Query: 186 ITSKFCCYIKRRSRSMGGGTP*RTISMLLLLERPAD 79
           I SK CCY    + S GGG   R  +M+ +   PAD
Sbjct: 84  IQSK-CCYYTSSASSTGGGRGQRAWAMVAIWRPPAD 118


>05_03_0316 +
           12242823-12242964,12243032-12243282,12243370-12243573,
           12243660-12243752,12243828-12243926,12244006-12244308
          Length = 363

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +2

Query: 260 HETVKKKRNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKELD 397
           H+ V+  R   F++  +   GR  V +  + K+NE++MKL  K +D
Sbjct: 232 HDRVEVDRATFFDECHKTKDGR-YVNDATQDKMNEVYMKLAEKRVD 276


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,243,057
Number of Sequences: 37544
Number of extensions: 283280
Number of successful extensions: 734
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)