Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_K19
         (627 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456417-1|CAG30303.1|  511|Homo sapiens CECR1 protein.                78   2e-14
BC051755-1|AAH51755.1|  511|Homo sapiens cat eye syndrome chromo...    78   2e-14
AF190746-1|AAF65941.1|  511|Homo sapiens CECR1 protein protein.        78   2e-14
BC033630-1|AAH33630.1|  344|Homo sapiens sorting nexin 16 protein.     31   2.5  
AF305779-1|AAG25676.1|  343|Homo sapiens sorting nexin 16 protein.     31   2.5  

>CR456417-1|CAG30303.1|  511|Homo sapiens CECR1 protein.
          Length = 511

 Score = 78.2 bits (184), Expect = 2e-14
 Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
 Frame = +2

Query: 215 FLWLSIIMQAFCNTTHETVKKKRNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKEL 394
           FL L++ M  F +    ++ + R  L  KE  M LG  +VLN  E   NE  M LK  E+
Sbjct: 14  FLLLAVAMSFFGSAL--SIDETRAHLLLKEKMMRLGGRLVLNTKEELANERLMTLKIAEM 71

Query: 395 DQGFRHRRPFVLSKHFFEYKDDVKKTELYKLITKMPKGAVLHAHDTSLLGPDYVLK-LTY 571
            +  R    F  S HFF+ K  +++++++ ++  MPKGA LH HD  ++  D++++ +TY
Sbjct: 72  KEAMR-TLIFPPSMHFFQAKHLIERSQVFNILRMMPKGAALHLHDIGIVTMDWLVRNVTY 130

Query: 572 WKDLYICFIDDEVL-FXFA 625
               +ICF    ++ F FA
Sbjct: 131 RPHCHICFTPRGIMQFRFA 149


>BC051755-1|AAH51755.1|  511|Homo sapiens cat eye syndrome
           chromosome region, candidate 1 protein.
          Length = 511

 Score = 78.2 bits (184), Expect = 2e-14
 Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
 Frame = +2

Query: 215 FLWLSIIMQAFCNTTHETVKKKRNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKEL 394
           FL L++ M  F +    ++ + R  L  KE  M LG  +VLN  E   NE  M LK  E+
Sbjct: 14  FLLLAVAMSFFGSAL--SIDETRAHLLLKEKMMRLGGRLVLNTKEELANERLMTLKIAEM 71

Query: 395 DQGFRHRRPFVLSKHFFEYKDDVKKTELYKLITKMPKGAVLHAHDTSLLGPDYVLK-LTY 571
            +  R    F  S HFF+ K  +++++++ ++  MPKGA LH HD  ++  D++++ +TY
Sbjct: 72  KEAMR-TLIFPPSMHFFQAKHLIERSQVFNILRMMPKGAALHLHDIGIVTMDWLVRNVTY 130

Query: 572 WKDLYICFIDDEVL-FXFA 625
               +ICF    ++ F FA
Sbjct: 131 RPHCHICFTPRGIMQFRFA 149


>AF190746-1|AAF65941.1|  511|Homo sapiens CECR1 protein protein.
          Length = 511

 Score = 78.2 bits (184), Expect = 2e-14
 Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
 Frame = +2

Query: 215 FLWLSIIMQAFCNTTHETVKKKRNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKEL 394
           FL L++ M  F +    ++ + R  L  KE  M LG  +VLN  E   NE  M LK  E+
Sbjct: 14  FLLLAVAMSFFGSAL--SIDETRAHLLLKEKMMRLGGRLVLNTKEELANERLMTLKIAEM 71

Query: 395 DQGFRHRRPFVLSKHFFEYKDDVKKTELYKLITKMPKGAVLHAHDTSLLGPDYVLK-LTY 571
            +  R    F  S HFF+ K  +++++++ ++  MPKGA LH HD  ++  D++++ +TY
Sbjct: 72  KEAMR-TLIFPPSMHFFQAKHLIERSQVFNILRMMPKGAALHLHDIGIVTMDWLVRNVTY 130

Query: 572 WKDLYICFIDDEVL-FXFA 625
               +ICF    ++ F FA
Sbjct: 131 RPHCHICFTPRGIMQFRFA 149


>BC033630-1|AAH33630.1|  344|Homo sapiens sorting nexin 16 protein.
          Length = 344

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 16/53 (30%), Positives = 31/53 (58%)
 Frame = +2

Query: 239 QAFCNTTHETVKKKRNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKELD 397
           +AFC T  ET  + + EL EK+ EM   + + L+E +  ++ +  +++T  L+
Sbjct: 227 RAFCETLEETNYRLQKELLEKQKEMESLKKL-LSEKQLHIDTLENRIRTLSLE 278


>AF305779-1|AAG25676.1|  343|Homo sapiens sorting nexin 16 protein.
          Length = 343

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 16/53 (30%), Positives = 31/53 (58%)
 Frame = +2

Query: 239 QAFCNTTHETVKKKRNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKELD 397
           +AFC T  ET  + + EL EK+ EM   + + L+E +  ++ +  +++T  L+
Sbjct: 227 RAFCETLEETNYRLQKELLEKQKEMESLKKL-LSEKQLHIDTLENRIRTLSLE 278


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,192,965
Number of Sequences: 237096
Number of extensions: 1562838
Number of successful extensions: 3465
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3459
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)