Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_K17
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0034 - 11435678-11435702,11435787-11435816,11436364-114365... 64 1e-10
08_01_0066 - 455589-455687,455902-455976,456531-456677,457158-45... 60 2e-09
06_01_0067 + 561910-561987,562698-562759,564293-564338,564701-56... 50 2e-06
11_03_0227 + 11934530-11934638,11937206-11937351,11937492-119376... 46 3e-05
12_01_0813 + 7475591-7475693,7476972-7477117,7477205-7477324,747... 45 5e-05
08_01_0130 + 1040696-1041049,1042135-1042275,1042422-1042673,104... 44 8e-05
03_01_0215 + 1696250-1696573,1697653-1697793,1698267-1698539,169... 44 1e-04
07_03_1324 - 25825153-25825197,25825705-25825785,25825907-258259... 44 1e-04
04_01_0026 - 354855-354876,355184-355248,355710-355817,356215-35... 43 2e-04
02_05_0942 + 32970537-32970581,32971059-32971113,32971300-329714... 43 2e-04
04_04_1543 - 34270578-34270718,34271069-34271341,34271782-342719... 43 2e-04
06_01_0718 + 5233030-5233062,5233329-5233383,5233543-5233660,523... 41 0.001
07_03_0057 + 12872946-12873152,12873371-12873421,12876335-128764... 30 1.9
03_03_0015 - 13755971-13756957 30 1.9
10_03_0021 + 7129786-7130117,7130227-7130347,7131048-7131136,713... 28 5.6
05_04_0415 - 21080600-21080941,21081119-21081217,21085363-210854... 27 9.9
>08_02_0034 -
11435678-11435702,11435787-11435816,11436364-11436501,
11436646-11436755,11436838-11436867,11437948-11437993,
11438453-11438622,11439156-11439221,11439299-11439378,
11440704-11440842,11440933-11441013,11441112-11441147,
11441414-11441539,11442084-11442179,11443615-11443689,
11444288-11444434,11445155-11445229,11445485-11445619,
11445706-11445834,11446161-11446292,11446395-11446598
Length = 689
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/57 (50%), Positives = 39/57 (68%)
Frame = +2
Query: 356 KSKLLKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYL 526
K LK +I GAPASGKGT IV+KY + H+S+GD LR ++ TE+GK+ K Y+
Sbjct: 86 KEAPLKVMISGAPASGKGTQCRMIVEKYGLVHISTGDLLRAEVSSGTEIGKKAKEYM 142
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +3
Query: 462 EISSGTT*QNKQNWAKRLKHTLDEGKLVPDDLMIKFMIKELKE--VNNKPWLLDGFPRTV 635
E+SSGT K+ K +D G LVPD ++ ++ L + V + WLLDG+PR+
Sbjct: 127 EVSSGT------EIGKKAKEYMDNGMLVPDQVVTDMVVSRLSQPDVRERGWLLDGYPRSY 180
Query: 636 EQANAL 653
QA +L
Sbjct: 181 AQAQSL 186
>08_01_0066 -
455589-455687,455902-455976,456531-456677,457158-457292,
457380-457508,457719-457814,458212-458403
Length = 290
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/60 (48%), Positives = 39/60 (65%)
Frame = +2
Query: 347 MSVKSKLLKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYL 526
++VK+ LK +I GAPASGKGT I KY + H+S+GD LR IA +E GK K ++
Sbjct: 67 VAVKADPLKVMIAGAPASGKGTQCELIKSKYGLVHISAGDLLRAEIAAGSENGKRAKEFM 126
Score = 47.6 bits (108), Expect = 9e-06
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +3
Query: 507 KRLKHTLDEGKLVPDDLMIKFMIKEL--KEVNNKPWLLDGFPRTVEQANAL 653
KR K +++G+LVPD++++ + + L + K WLLDG+PR+ QA AL
Sbjct: 120 KRAKEFMEKGQLVPDEIVVNMVKERLLQPDAQEKGWLLDGYPRSYSQAMAL 170
>06_01_0067 +
561910-561987,562698-562759,564293-564338,564701-564758,
564892-565009,565130-565286,565611-565718,565884-565955,
566058-566174,566309-566404
Length = 303
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = +2
Query: 362 KLLKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLGRRK 538
K+ ++G P SGKGT ++IVK++ H+S+GD LR+ TE G +K + K
Sbjct: 74 KITIVFVIGGPGSGKGTQCAKIVKQFGFTHLSAGDLLREEAKYDTEQGTMIKNLMNEGK 132
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +3
Query: 513 LKHTLDEGKLVPDDLMIKFMIKELKEVNNKPWLLDGFPRTVEQANA 650
+K+ ++EGKLV DL++K + K ++E N +L+DGFPR E +A
Sbjct: 124 IKNLMNEGKLVSSDLIVKLLFKAMRESGNDKFLVDGFPRNEENRHA 169
>11_03_0227 +
11934530-11934638,11937206-11937351,11937492-11937611,
11937731-11937898,11938534-11938623,11938920-11939018
Length = 243
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +2
Query: 344 KMSVKSKLLKALIL-GAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVK 517
+M SK K LIL G P SGKGT S I +Y + H+++GD LR +A +T LG + K
Sbjct: 22 RMKCSSKPDKRLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAK 80
Score = 44.4 bits (100), Expect = 8e-05
Identities = 21/49 (42%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = +3
Query: 510 RLKHTLDEGKLVPDDLMIKFMIKELKEVN-NKPWLLDGFPRTVEQANAL 653
+ K +D+G+LV DDL++ + + +K+ + K ++LDGFPRTV QA L
Sbjct: 78 KAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKL 126
>12_01_0813 +
7475591-7475693,7476972-7477117,7477205-7477324,
7477445-7477612,7478252-7478341,7478941-7479039
Length = 241
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/49 (42%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = +3
Query: 510 RLKHTLDEGKLVPDDLMIKFMIKELKEVN-NKPWLLDGFPRTVEQANAL 653
+ K +D+G+LV DDL++ + + +K+ + K ++LDGFPRTV QA L
Sbjct: 76 KAKEAMDKGELVSDDLVVGIIDEAMKKTSCQKGFILDGFPRTVVQAQKL 124
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +2
Query: 344 KMSVKSKLLKALIL-GAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVK 517
+M SK K +IL G P GKGT S I ++ + H+++GD LR +A +T LG + K
Sbjct: 20 RMKCSSKPDKRVILVGPPGCGKGTQSPLIKDEFCLCHLATGDMLRAAVAAKTPLGIKAK 78
>08_01_0130 +
1040696-1041049,1042135-1042275,1042422-1042673,
1043797-1043904,1044289-1044593,1044720-1044841,
1044979-1045225,1045308-1045365,1045414-1045530,
1045718-1045753,1046492-1046554,1046958-1047047,
1047241-1047399,1047475-1047596,1048145-1048217,
1048307-1048375
Length = 771
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Frame = +3
Query: 507 KRLKHTLDEGKLVPDDLMIKFMIKELKEVNNK---PWLLDGFPRTVEQANAL 653
K++ ++++EGKLVP+D++ + K L+E NK ++LDG PRT QA L
Sbjct: 117 KKIANSVNEGKLVPEDIIFGLLTKRLEEGYNKGETGFILDGIPRTHMQAEIL 168
>03_01_0215 +
1696250-1696573,1697653-1697793,1698267-1698539,
1698755-1698814,1698890-1699033
Length = 313
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = +3
Query: 510 RLKHTLDEGKLVPDDLMIKFMIKELK---EVNNKPWLLDGFPRTVEQANAL 653
+L +++GKLV D+++I + K LK E ++LDGFPRTV+QA L
Sbjct: 108 QLAEIVNQGKLVSDEIIINLLSKRLKKGEEQGESGFILDGFPRTVKQAEIL 158
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +2
Query: 377 LILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLGRRK 538
+ LG P GKGT +SR+ + + H+++GD +RD +A L ++ + + K
Sbjct: 64 VFLGCPGVGKGTYASRLSRLLGVPHIATGDLVRDELASSGPLSVQLAEIVNQGK 117
>07_03_1324 -
25825153-25825197,25825705-25825785,25825907-25825967,
25826005-25826060,25826171-25826239,25826366-25826473,
25826555-25826635,25826795-25826951,25827060-25827177,
25827285-25827339,25827779-25827814
Length = 288
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +2
Query: 362 KLLKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVK 517
K+ +LG P SGKGT + IV+ + H+S+GD LR I +E G ++
Sbjct: 23 KVTVVFVLGGPGSGKGTQCANIVEHFGFTHLSAGDLLRAEIKSGSENGTMIE 74
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 513 LKHTLDEGKLVPDDLMIKFMIKELKEVNNKPWLLDGFPRTVEQANA 650
+++ + EGK+VP ++ IK + + + N +L+DGFPR E A
Sbjct: 73 IENMIKEGKIVPSEVTIKLLQDAMIKNENDKFLIDGFPRNEENRAA 118
>04_01_0026 -
354855-354876,355184-355248,355710-355817,356215-356295,
356729-356885,356990-357107,357485-357533,357806-357901
Length = 231
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +2
Query: 374 ALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGK 508
A +LG P SGKGT RI + H+S+GD LR I+ E G+
Sbjct: 45 AFVLGGPGSGKGTQCVRIASDFGFAHLSAGDLLRSEISTGGEKGE 89
Score = 35.1 bits (77), Expect = 0.049
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +3
Query: 525 LDEGKLVPDDLMIKFMIKELKEVNNKPWLLDGFPRTVE 638
+ EGK+VP ++ ++ + K ++ + K L+DGFPR E
Sbjct: 95 IKEGKIVPSEITVELIRKAMESSDAKRVLIDGFPRCEE 132
>02_05_0942 +
32970537-32970581,32971059-32971113,32971300-32971417,
32971567-32971615,32971637-32971723,32971890-32971970,
32972074-32972181,32972432-32972503,32973218-32973250
Length = 215
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +2
Query: 338 TFKMSVKSKLLKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVK 517
T M K+ +LG P SGKGT + IV+ + H+S+GD LR I +E G ++
Sbjct: 18 TDNMLGDKKVTVVFVLGGPGSGKGTQCANIVEHFGFIHLSAGDLLRAEIKSGSENGTMIE 77
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 513 LKHTLDEGKLVPDDLMIKFMIKELKEVNNKPWLLDGFPRTVEQANA 650
+++ + EGK+VP + + MIK N +L+DGFPR E A
Sbjct: 76 IENMIKEGKIVPSE---EAMIKS----GNDKFLIDGFPRNEENRAA 114
>04_04_1543 -
34270578-34270718,34271069-34271341,34271782-34271922,
34272365-34272667
Length = 285
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Frame = +3
Query: 501 WAKRLKHTLDEGKLVPDDLMIKFMIKELKEVNNKP---WLLDGFPRTVEQANAL 653
++++L ++ GKLV D+++I + K L+E K ++LDGFPRT+ QA L
Sbjct: 98 FSEQLAEIVNNGKLVSDEIIINLLSKRLEEGAEKGELGFILDGFPRTIRQAEIL 151
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +2
Query: 377 LILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLGRRK 538
+ LG P GKGT +SR+ + + H+++GD +RD +A +++ + K
Sbjct: 57 VFLGCPGVGKGTYASRLSQMLRVPHIATGDLVRDALASPGPFSEQLAEIVNNGK 110
>06_01_0718 +
5233030-5233062,5233329-5233383,5233543-5233660,
5233746-5233902,5234033-5234113,5234213-5234320,
5234448-5234483
Length = 195
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +2
Query: 380 ILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLGRRK 538
+LG P SGKGT S IV+ + H+S+G+ LR I +E G + + K
Sbjct: 28 VLGGPGSGKGTQCSNIVEHFGFIHLSAGELLRAEINSGSENGTMIDTIITEGK 80
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +3
Query: 525 LDEGKLVPDDLMIKFMIKELKEVNNKPWLLDGFPRTVE 638
+ EGK+VP ++ IK + + + + N +++DGFPR E
Sbjct: 76 ITEGKIVPSEITIKLLQEAIIKGGNDKYIIDGFPRNEE 113
>07_03_0057 +
12872946-12873152,12873371-12873421,12876335-12876480,
12876567-12876756
Length = 197
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 377 LILGAPASGKGTISSRIVKKYNIEHVSSGDKLRD 478
L+ G P +GK T S + ++ H++ GD +R+
Sbjct: 16 LVTGTPGTGKTTTCSLLADAVDLRHINIGDLVRE 49
>03_03_0015 - 13755971-13756957
Length = 328
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/45 (33%), Positives = 30/45 (66%)
Frame = +2
Query: 347 MSVKSKLLKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDH 481
+S K K++ +LGA A+GK ++ R+ +++ E ++S DK++ H
Sbjct: 14 LSTKPKVI--FVLGATATGKSKLAIRLAARFDGEVINS-DKIQAH 55
>10_03_0021 +
7129786-7130117,7130227-7130347,7131048-7131136,
7131375-7131459,7131609-7131771,7132861-7132937,
7133016-7133160,7133236-7133537,7133615-7133720,
7134781-7134935,7135556-7135712,7135799-7135891,
7136232-7136359,7136439-7136696,7136855-7137145,
7137235-7137318,7138335-7138468,7138557-7138784,
7139778-7139958,7140021-7140108,7140268-7140434,
7140750-7141012,7141117-7141120
Length = 1216
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 377 LILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLGR 532
L+LG PASGK T+ + K + + SG+ + +A + AY+ +
Sbjct: 184 LLLGPPASGKSTLLLALADKLDSQLKKSGEVAYNGMALDQFCVQRTSAYISQ 235
>05_04_0415 -
21080600-21080941,21081119-21081217,21085363-21085455,
21085802-21085855,21085943-21086044,21086449-21086523,
21086662-21086784
Length = 295
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/25 (40%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +3
Query: 582 LKEVNNKPWLLDGFPRTV-EQANAL 653
++E+ N PW L FPR + E+A ++
Sbjct: 186 MQEIKNHPWFLKNFPRELTEEAQSI 210
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,780,242
Number of Sequences: 37544
Number of extensions: 278306
Number of successful extensions: 736
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -