Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_K17
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical p... 51 8e-07
Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kin... 50 1e-06
Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical pr... 48 8e-06
Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 34 0.10
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 34 0.10
AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical... 29 2.9
AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical... 29 2.9
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 28 5.0
AF045639-5|AAC02569.2| 937|Caenorhabditis elegans Osmotic avoid... 28 5.0
AF031408-1|AAB87064.1| 937|Caenorhabditis elegans olfactory cha... 28 5.0
Z68342-6|CAD89740.1| 418|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z68342-5|CAA92774.2| 416|Caenorhabditis elegans Hypothetical pr... 27 8.8
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 27 8.8
>L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical
protein C29E4.8 protein.
Length = 251
Score = 50.8 bits (116), Expect = 8e-07
Identities = 23/57 (40%), Positives = 36/57 (63%)
Frame = +2
Query: 368 LKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLGRRK 538
++A+ +G P SGKGT + +KY H+++GD LR +A +E GKE+KA + K
Sbjct: 27 IRAIFIGPPGSGKGTQAPAFAQKYFSCHLATGDLLRAEVASGSEFGKELKATMDAGK 83
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = +3
Query: 501 WAKRLKHTLDEGKLVPDDLMIKFMIKELKEVNNK-PWLLDGFPRTVEQANAL 653
+ K LK T+D GKLV D+++ K + ++L++ K ++LDGFPRT QA L
Sbjct: 71 FGKELKATMDAGKLVSDEVVCKLIEQKLEKPECKYGFILDGFPRTSGQAEKL 122
>Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical
protein F38B2.4 protein.
Length = 210
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +2
Query: 380 ILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYL 526
I+G P SGKGT +IV KY + H+SSGD LRD + + G ++ A +
Sbjct: 25 IVGGPGSGKGTQCDKIVAKYGLTHLSSGDLLRDEVKSGSPRGAQLTAIM 73
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Frame = +3
Query: 510 RLKHTLDEGKLVPDDLMIKFMIKE--LK--EVNNKPWLLDGFPRTVEQ 641
+L ++ G LVP ++++ ++KE LK E +K +L+DG+PR V Q
Sbjct: 68 QLTAIMESGALVPLEVVLD-LVKEAMLKAIEKGSKGFLIDGYPREVAQ 114
>AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kinase
1 protein.
Length = 210
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +2
Query: 380 ILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYL 526
I+G P SGKGT +IV KY + H+SSGD LRD + + G ++ A +
Sbjct: 25 IVGGPGSGKGTQCDKIVAKYGLTHLSSGDLLRDEVKSGSPRGAQLTAIM 73
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Frame = +3
Query: 510 RLKHTLDEGKLVPDDLMIKFMIKE--LK--EVNNKPWLLDGFPRTVEQ 641
+L ++ G LVP ++++ ++KE LK E +K +L+DG+PR V Q
Sbjct: 68 QLTAIMESGALVPLEVVLD-LVKEAMLKAIEKGSKGFLIDGYPREVAQ 114
>Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical
protein ZK673.2 protein.
Length = 222
Score = 47.6 bits (108), Expect = 8e-06
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Frame = +2
Query: 365 LLKALILGAPASGKGTISSRIVKKYN---IEHVSSGDKLRDHIAKQTELGKEVKAYLGR 532
+ + L+ GA SGKGTI+ +V+++ + ++GD +RDHIA+ TE G +++L +
Sbjct: 1 MYRVLLSGAAGSGKGTIARMLVREFEPLGFNYFAAGDFIRDHIARGTEFGVRAQSFLNK 59
>Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical
protein F40F8.1 protein.
Length = 191
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +2
Query: 380 ILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQ-TELGKEVKAYL 526
+LG P SGKGTI ++I + N H+S+GD LR ++ +E G +++++
Sbjct: 7 VLGPPGSGKGTICAKIQENLNYVHLSAGDLLRAERQREGSEFGALIESHI 56
>Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical
protein C29F7.3 protein.
Length = 191
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +2
Query: 380 ILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYL 526
+LG P SGKGTI ++I + H+S+GD LR A++ G E A +
Sbjct: 7 VLGPPGSGKGTICTQIHENLGYVHLSAGDLLR---AERERAGSEYGALI 52
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 377 LILGAPASGKGTISSRIVKKYN-IEHVSSGDKLRDHI 484
L+LGAP S K IS RI +KY+ +S GD LR I
Sbjct: 517 LVLGAPGSQKNDISRRIAQKYDGFTMLSMGDILRKKI 553
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 377 LILGAPASGKGTISSRIVKKYN-IEHVSSGDKLRDHI 484
L+LGAP S K IS RI +KY+ +S GD LR I
Sbjct: 517 LVLGAPGSQKNDISRRIAQKYDGFTMLSMGDILRKKI 553
>AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical
protein Y105C5B.21b protein.
Length = 1084
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = -3
Query: 498 SVCFAMWSLSLSPLDTCSILYFFTIRDDIVPFPDAGAPKINAFSSLDFTDILNVYFEL 325
+V A+ +L++ P + ++ + +RD + P+ G+P+ +A S +L + FE+
Sbjct: 865 AVATALRNLAIDPRNR-ELIGKYALRDFLDKLPEPGSPRRSAISDQTIGAVLGILFEI 921
>AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical
protein Y105C5B.21a protein.
Length = 1254
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = -3
Query: 498 SVCFAMWSLSLSPLDTCSILYFFTIRDDIVPFPDAGAPKINAFSSLDFTDILNVYFEL 325
+V A+ +L++ P + ++ + +RD + P+ G+P+ +A S +L + FE+
Sbjct: 1035 AVATALRNLAIDPRNR-ELIGKYALRDFLDKLPEPGSPRRSAISDQTIGAVLGILFEI 1091
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 541 SFPSSKVCFNLFAQFCLFCYVV 476
S+PS KVC L C FC+++
Sbjct: 884 SYPSRKVCACLCESVCAFCFLI 905
>AF045639-5|AAC02569.2| 937|Caenorhabditis elegans Osmotic
avoidance abnormal protein9 protein.
Length = 937
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 435 NTILSMCLVEISSGTT*QNKQNWAKRL-KHTLDEGKLVPDDLMIKFMIKELKE 590
NTIL MC++ SS ++WAK H ++ P L K K++ E
Sbjct: 262 NTILHMCVINYSSSMYSYAVRHWAKPADPHVVNHAGFTPLTLATKLGRKQIFE 314
>AF031408-1|AAB87064.1| 937|Caenorhabditis elegans olfactory
channel protein.
Length = 937
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 435 NTILSMCLVEISSGTT*QNKQNWAKRL-KHTLDEGKLVPDDLMIKFMIKELKE 590
NTIL MC++ SS ++WAK H ++ P L K K++ E
Sbjct: 262 NTILHMCVINYSSSMYSYAVRHWAKPADPHVVNHAGFTPLTLATKLGRKQIFE 314
>Z68342-6|CAD89740.1| 418|Caenorhabditis elegans Hypothetical
protein F38E11.6b protein.
Length = 418
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 356 KSKLLKALILGAPASGKGTISSRIVKKYNIEHVSSGD 466
K+ + I G PAS KG+I + +N +S D
Sbjct: 39 KNPIAIVFIFGGPASQKGSIIEELTSSFNFTSISVED 75
>Z68342-5|CAA92774.2| 416|Caenorhabditis elegans Hypothetical
protein F38E11.6a protein.
Length = 416
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 356 KSKLLKALILGAPASGKGTISSRIVKKYNIEHVSSGD 466
K+ + I G PAS KG+I + +N +S D
Sbjct: 39 KNPIAIVFIFGGPASQKGSIIEELTSSFNFTSISVED 75
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 318 EYRATHCAKTFCHA 277
E+ HC KTFCHA
Sbjct: 17 EFLCGHCGKTFCHA 30
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,831,529
Number of Sequences: 27780
Number of extensions: 281498
Number of successful extensions: 839
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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