Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_K17
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    28   0.091
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           28   0.091
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           28   0.091
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    24   1.5  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   6.0  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   6.0  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   6.0  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 0.091
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +2

Query: 578 GIEGSQQQTMALRWISEN 631
           G  G + Q+MALRW+SEN
Sbjct: 175 GNMGLKDQSMALRWVSEN 192


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 27.9 bits (59), Expect = 0.091
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +2

Query: 578 GIEGSQQQTMALRWISEN 631
           G  G + Q+MALRW+SEN
Sbjct: 46  GNMGLKDQSMALRWVSEN 63


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 0.091
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +2

Query: 578 GIEGSQQQTMALRWISEN 631
           G  G + Q+MALRW+SEN
Sbjct: 175 GNMGLKDQSMALRWVSEN 192


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +3

Query: 153 YLTMNIFKCFIQITRT*CLNIV*INTNG 236
           +L +N+F  F  ++R+  +N   +N+NG
Sbjct: 435 FLAINVFYWFAYLSRSERINYYNVNSNG 462


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 47  LDSNVNSLTKFGIKLLRYQLS*DNSKFRMIMSFYFLSYNEYFQVFHTDNS 196
           LD   N+ T++ I  + +  S  +SKF +  +   LSYN   +  ++ NS
Sbjct: 198 LDDMYNNNTEWEIVHMSHSESTIDSKFGLGFTTDLLSYNILLRRHYSMNS 247


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 578 GIEGSQQQTMALRWISENS 634
           G  G   Q +ALRW+ +N+
Sbjct: 219 GNMGLWDQALALRWLRDNA 237



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 126 NLELSQDS*YLNNFMPNLVRL 64
           N  +S+D  YLN ++P   RL
Sbjct: 119 NTNISEDCLYLNIWVPQKYRL 139


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 578 GIEGSQQQTMALRWISENS 634
           G  G   Q +ALRW+ +N+
Sbjct: 219 GNMGLWDQALALRWLRDNA 237



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 126 NLELSQDS*YLNNFMPNLVRL 64
           N  +S+D  YLN ++P   RL
Sbjct: 119 NTNISEDCLYLNIWVPQKYRL 139


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,076
Number of Sequences: 438
Number of extensions: 3509
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)