Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_K14
         (568 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL161659-2|CAI15136.1|  345|Homo sapiens chromosome 20 open read...    69   1e-11
AL109657-2|CAI22985.1|  345|Homo sapiens chromosome 20 open read...    69   1e-11
BC073158-1|AAH73158.1|  317|Homo sapiens chromosome 20 open read...    66   1e-10
AL161659-3|CAI15137.1|  317|Homo sapiens chromosome 20 open read...    66   1e-10
AL109657-3|CAI22986.1|  317|Homo sapiens chromosome 20 open read...    66   1e-10

>AL161659-2|CAI15136.1|  345|Homo sapiens chromosome 20 open reading
           frame 7 protein.
          Length = 345

 Score = 68.9 bits (161), Expect = 1e-11
 Identities = 33/84 (39%), Positives = 51/84 (60%)
 Frame = +1

Query: 250 RTMNIFDRKTKMIQRERAACNDEYHLSEYVKEEIGWRTADKIFDIKRTFKNAVELGASRG 429
           RT+NIFDR  K  Q+  AA   E    +Y+KEE+G R AD+++DI R F  A++LG  RG
Sbjct: 42  RTLNIFDRDLKRKQKNWAARQPEPTKFDYLKEEVGSRIADRVYDIPRNFPLALDLGCGRG 101

Query: 430 YVSRHFLPDSVEKVTLCDTSRTHL 501
           Y++++   +++ K    D +   L
Sbjct: 102 YIAQYLNKETIGKFFQADIAENAL 125


>AL109657-2|CAI22985.1|  345|Homo sapiens chromosome 20 open reading
           frame 7 protein.
          Length = 345

 Score = 68.9 bits (161), Expect = 1e-11
 Identities = 33/84 (39%), Positives = 51/84 (60%)
 Frame = +1

Query: 250 RTMNIFDRKTKMIQRERAACNDEYHLSEYVKEEIGWRTADKIFDIKRTFKNAVELGASRG 429
           RT+NIFDR  K  Q+  AA   E    +Y+KEE+G R AD+++DI R F  A++LG  RG
Sbjct: 42  RTLNIFDRDLKRKQKNWAARQPEPTKFDYLKEEVGSRIADRVYDIPRNFPLALDLGCGRG 101

Query: 430 YVSRHFLPDSVEKVTLCDTSRTHL 501
           Y++++   +++ K    D +   L
Sbjct: 102 YIAQYLNKETIGKFFQADIAENAL 125


>BC073158-1|AAH73158.1|  317|Homo sapiens chromosome 20 open reading
           frame 7 protein.
          Length = 317

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 30/65 (46%), Positives = 44/65 (67%)
 Frame = +1

Query: 250 RTMNIFDRKTKMIQRERAACNDEYHLSEYVKEEIGWRTADKIFDIKRTFKNAVELGASRG 429
           RT+NIFDR  K  Q+  AA   E    +Y+KEE+G R AD+++DI R F  A++LG  RG
Sbjct: 42  RTLNIFDRDLKRKQKNWAARQPEPTKFDYLKEEVGSRIADRVYDIPRNFPLALDLGCGRG 101

Query: 430 YVSRH 444
           Y++++
Sbjct: 102 YIAQY 106


>AL161659-3|CAI15137.1|  317|Homo sapiens chromosome 20 open reading
           frame 7 protein.
          Length = 317

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 30/65 (46%), Positives = 44/65 (67%)
 Frame = +1

Query: 250 RTMNIFDRKTKMIQRERAACNDEYHLSEYVKEEIGWRTADKIFDIKRTFKNAVELGASRG 429
           RT+NIFDR  K  Q+  AA   E    +Y+KEE+G R AD+++DI R F  A++LG  RG
Sbjct: 42  RTLNIFDRDLKRKQKNWAARQPEPTKFDYLKEEVGSRIADRVYDIPRNFPLALDLGCGRG 101

Query: 430 YVSRH 444
           Y++++
Sbjct: 102 YIAQY 106


>AL109657-3|CAI22986.1|  317|Homo sapiens chromosome 20 open reading
           frame 7 protein.
          Length = 317

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 30/65 (46%), Positives = 44/65 (67%)
 Frame = +1

Query: 250 RTMNIFDRKTKMIQRERAACNDEYHLSEYVKEEIGWRTADKIFDIKRTFKNAVELGASRG 429
           RT+NIFDR  K  Q+  AA   E    +Y+KEE+G R AD+++DI R F  A++LG  RG
Sbjct: 42  RTLNIFDRDLKRKQKNWAARQPEPTKFDYLKEEVGSRIADRVYDIPRNFPLALDLGCGRG 101

Query: 430 YVSRH 444
           Y++++
Sbjct: 102 YIAQY 106


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,091,357
Number of Sequences: 237096
Number of extensions: 1347287
Number of successful extensions: 7099
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7099
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)