Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_K14
(568 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83234-1|CAB70169.1| 313|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z81528-6|CAB04285.1| 633|Caenorhabditis elegans Hypothetical pr... 34 0.082
AC024881-3|AAK71413.1| 306|Caenorhabditis elegans Serpentine re... 31 0.58
AF016420-6|AAB65311.3| 530|Caenorhabditis elegans Udp-glucurono... 29 1.8
U13072-3|AAK31396.4| 326|Caenorhabditis elegans Serpentine rece... 29 2.3
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 29 3.1
AF026214-5|AAB71310.1| 525|Caenorhabditis elegans Hypothetical ... 29 3.1
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ... 28 4.1
U40945-1|AAA81719.2| 656|Caenorhabditis elegans Hypothetical pr... 28 5.4
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 28 5.4
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 28 5.4
U80447-8|AAB37812.3| 900|Caenorhabditis elegans Patched related... 27 7.1
U41996-1|AAA83471.2| 306|Caenorhabditis elegans Serpentine rece... 27 9.4
AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical... 27 9.4
>Z83234-1|CAB70169.1| 313|Caenorhabditis elegans Hypothetical
protein K09E4.3 protein.
Length = 313
Score = 65.7 bits (153), Expect = 2e-11
Identities = 27/76 (35%), Positives = 48/76 (63%)
Frame = +1
Query: 262 IFDRKTKMIQRERAACNDEYHLSEYVKEEIGWRTADKIFDIKRTFKNAVELGASRGYVSR 441
+FDR+ K QR+ A ++ ++Y+KEEIGWR ADK+FD+ + +++G G+++
Sbjct: 2 VFDRQMKRGQRDWAVRQPDFKAAQYLKEEIGWRVADKVFDLTKFNPLVLDIGCGVGHIAP 61
Query: 442 HFLPDSVEKVTLCDTS 489
H + ++V K+ D S
Sbjct: 62 HLIKENVGKIIQVDMS 77
>Z81528-6|CAB04285.1| 633|Caenorhabditis elegans Hypothetical
protein F35E2.7 protein.
Length = 633
Score = 33.9 bits (74), Expect = 0.082
Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = -3
Query: 389 LLMSNILSAVRQPISSLTYSDKWYSSLQAA-LSLCIILVFLSNIFIVRYIEL 237
LL+ ++S++ + +KWY +L + LSL +I++F NI +++Y +L
Sbjct: 342 LLIVALISSILLAVLVFETFEKWYLTLTSTNLSLLVIILFFLNILLIKYDKL 393
>AC024881-3|AAK71413.1| 306|Caenorhabditis elegans Serpentine
receptor, class sx protein6 protein.
Length = 306
Score = 31.1 bits (67), Expect = 0.58
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -3
Query: 404 AFLNVLLMSNILSAVRQPISSLTYSDKWYSSLQAALSLCIILVFLSNIFIVRYIELAVFC 225
A + + L+ +IL V+ P T+S +WY L L + ++F FI E+ +FC
Sbjct: 96 AMIMLFLVVDILVIVKFPRFYHTFSTEWYIILALILPVIFGIIFFIWGFIETDDEIVIFC 155
>AF016420-6|AAB65311.3| 530|Caenorhabditis elegans
Udp-glucuronosyltransferase protein7 protein.
Length = 530
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 160 SNAKNIQADIRNIVQNSSYAAKQKTASSIYRTMNI 264
SNAK ++ I+N++QN Y A K S++ + I
Sbjct: 425 SNAKKLKKVIQNMIQNPKYLANAKKLSNLLQKQPI 459
>U13072-3|AAK31396.4| 326|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 3 protein.
Length = 326
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/85 (23%), Positives = 42/85 (49%)
Frame = -3
Query: 398 LNVLLMSNILSAVRQPISSLTYSDKWYSSLQAALSLCIILVFLSNIFIVRYIELAVFCFA 219
+NV+ + N+LS V + + +S + + + C +L++ + +F + Y + F A
Sbjct: 223 INVVSIFNLLSTVSASLDNFNFSQTFLNVAATLFNFC-VLIYGTLVFSLFYYLIPQFRSA 281
Query: 218 AYELF*TMFRISACIFFAFDPNKER 144
++F M ++A F D KE+
Sbjct: 282 LKDVFMKMKILNAVASFP-DLRKEK 305
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +3
Query: 99 NKANKNALLTVSKFTSFFIGIECKKYTGRYTK 194
N+A+++ ++TVSK + + I +KYT +++
Sbjct: 277 NEASRSDMMTVSKLSDRLVSIPSRKYTSGFSR 308
>AF026214-5|AAB71310.1| 525|Caenorhabditis elegans Hypothetical
protein F52H2.6 protein.
Length = 525
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/91 (24%), Positives = 39/91 (42%)
Frame = +1
Query: 205 NSSYAAKQKTASSIYRTMNIFDRKTKMIQRERAACNDEYHLSEYVKEEIGWRTADKIFDI 384
N+ + + + ++ N RK K IQ + ND S+ V GW T F +
Sbjct: 42 NTVFDFRNRIVHAVNSAPNAHVRKVKHIQEQLKEWNDNGRKSKLVNARPGWLTMSFRFPL 101
Query: 385 KRTFKNAVELGASRGYVSRHFLPDSVEKVTL 477
+ +NA ++ + + L VEK+T+
Sbjct: 102 YK--ENATKIATDKLF---DILDLDVEKMTV 127
>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
protein Y108G3AL.7 protein.
Length = 1192
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = -3
Query: 476 SVTFSTLSGRKCRDTYPREAPSSTAFLNVLLMSNILSAVRQPISSLTYSDKWY 318
+VT LS K PR+ ++T F+ ++S+ILS Q + + Y D+W+
Sbjct: 943 TVTTPVLSVPKSEGRGPRKEDTTTKFVRANVLSHILSG--QKLRAF-YGDEWF 992
>U40945-1|AAA81719.2| 656|Caenorhabditis elegans Hypothetical
protein F10D7.1 protein.
Length = 656
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = -3
Query: 413 SSTAFLNVLLMSNILSAVRQPISSLTYSDKWYSSLQAALSLCIILVFLSNIFIVRYIELA 234
S TA L + + N +R+P+S + + A SLC I +L NIF + A
Sbjct: 27 SITALLVNVYLLNCARYLRRPVSVNLRLCVFLLACDALCSLCYIFTYLINIFFSHFSNCA 86
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +3
Query: 99 NKANKNALLTVSKFTSFFIGIECKKYTGRYT 191
N+A+++ ++TVSK + + I +KYT ++
Sbjct: 249 NEASRSDMMTVSKLSDRLVSIPSRKYTSGFS 279
>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
protein Y80D3A.8 protein.
Length = 1293
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +3
Query: 99 NKANKNALLTVSKFTSFFIGIECKKYTGRYT 191
N+A+++ ++TVSK + + I +KYT ++
Sbjct: 295 NEASRSDMMTVSKLSDRLVSIPSRKYTSGFS 325
>U80447-8|AAB37812.3| 900|Caenorhabditis elegans Patched related
family protein 10 protein.
Length = 900
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = -3
Query: 398 LNVLLMSNILSAVRQPISSLTYSDKWYSSLQAALSLCIILVFLSNIFIV 252
L+VL +SN + + LTY + Y+ + A + ++ V N+F++
Sbjct: 305 LSVLGVSNAGMGIASAMGMLTYLEIQYNDIIAVMPFLVVAVGTDNMFLM 353
>U41996-1|AAA83471.2| 306|Caenorhabditis elegans Serpentine
receptor, class sx protein22 protein.
Length = 306
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 291 LYHLSFPIKYIHRSVYRTCSLLFCC 217
LY +SFP+KY VY+ + CC
Sbjct: 105 LYSVSFPVKYSTIPVYQYGIVFSCC 129
>AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical
protein Y22D7AR.2 protein.
Length = 1140
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 205 FERCFVYLPVYFLHSIPIKNDVNLDTV 125
F FVY+ ++F HS +K DV+ D V
Sbjct: 995 FVALFVYIGLWFYHSRKVKLDVSPDLV 1021
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,968,866
Number of Sequences: 27780
Number of extensions: 236053
Number of successful extensions: 756
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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