Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_K13
         (350 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13107-1|CAA31500.1|  153|Drosophila melanogaster protein ( Dros...   111   3e-25
AY113576-1|AAM29581.1|  153|Drosophila melanogaster RH27794p pro...   111   3e-25
AE014297-4796|AAF57188.3|  172|Drosophila melanogaster CG2210-PA...   111   3e-25
BT001459-1|AAN71214.1|  118|Drosophila melanogaster GM19775p pro...   109   1e-24
X85331-1|CAA59680.1|  437|Drosophila melanogaster msh protein.         33   0.10 
AY069763-1|AAL39908.1|  387|Drosophila melanogaster RE01365p pro...    31   0.31 
AF202050-1|AAF20908.1|  244|Drosophila melanogaster nmdyn-D7 pro...    31   0.31 
AE014297-999|AAF54425.1|  387|Drosophila melanogaster CG8362-PA ...    31   0.31 
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA...    27   6.7  

>X13107-1|CAA31500.1|  153|Drosophila melanogaster protein (
           Drosophila melanogasterawd mRNA ( abnormal wing disc ).
           ).
          Length = 153

 Score =  111 bits (266), Expect = 3e-25
 Identities = 49/63 (77%), Positives = 57/63 (90%)
 Frame = +3

Query: 72  MAEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRP 251
           MA  +ERTFIMVKPDGVQRGLVG IIERFE+KGFKLV LKF W S+ELL++HY+DL++RP
Sbjct: 1   MAANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARP 60

Query: 252 FFP 260
           FFP
Sbjct: 61  FFP 63


>AY113576-1|AAM29581.1|  153|Drosophila melanogaster RH27794p
           protein.
          Length = 153

 Score =  111 bits (266), Expect = 3e-25
 Identities = 49/63 (77%), Positives = 57/63 (90%)
 Frame = +3

Query: 72  MAEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRP 251
           MA  +ERTFIMVKPDGVQRGLVG IIERFE+KGFKLV LKF W S+ELL++HY+DL++RP
Sbjct: 1   MAANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARP 60

Query: 252 FFP 260
           FFP
Sbjct: 61  FFP 63


>AE014297-4796|AAF57188.3|  172|Drosophila melanogaster CG2210-PA
           protein.
          Length = 172

 Score =  111 bits (266), Expect = 3e-25
 Identities = 49/63 (77%), Positives = 57/63 (90%)
 Frame = +3

Query: 72  MAEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRP 251
           MA  +ERTFIMVKPDGVQRGLVG IIERFE+KGFKLV LKF W S+ELL++HY+DL++RP
Sbjct: 20  MAANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARP 79

Query: 252 FFP 260
           FFP
Sbjct: 80  FFP 82


>BT001459-1|AAN71214.1|  118|Drosophila melanogaster GM19775p
           protein.
          Length = 118

 Score =  109 bits (261), Expect = 1e-24
 Identities = 48/62 (77%), Positives = 56/62 (90%)
 Frame = +3

Query: 75  AEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPF 254
           A  +ERTFIMVKPDGVQRGLVG IIERFE+KGFKLV LKF W S+ELL++HY+DL++RPF
Sbjct: 1   AANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPF 60

Query: 255 FP 260
           FP
Sbjct: 61  FP 62


>X85331-1|CAA59680.1|  437|Drosophila melanogaster msh protein.
          Length = 437

 Score = 33.1 bits (72), Expect = 0.10
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 220 WRSSSDGHTNFKPTSLKPFFSKRSIMVPTRPRCTPS 113
           WRS+S  H   K TS    FS  S++  TRPR  P+
Sbjct: 41  WRSASAAHHLHKTTSRLSNFSVASLLADTRPRTPPN 76


>AY069763-1|AAL39908.1|  387|Drosophila melanogaster RE01365p
           protein.
          Length = 387

 Score = 31.5 bits (68), Expect = 0.31
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +3

Query: 84  RERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFV 197
           +  T  ++KP  ++ GL+G II      GF+L  ++ +
Sbjct: 245 KNTTLAIIKPHSIKDGLLGDIISEILSNGFRLTAMRMI 282


>AF202050-1|AAF20908.1|  244|Drosophila melanogaster nmdyn-D7
           protein.
          Length = 244

 Score = 31.5 bits (68), Expect = 0.31
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +3

Query: 84  RERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFV 197
           +  T  ++KP  ++ GL+G II      GF+L  ++ +
Sbjct: 102 KNTTLAIIKPHSIKDGLLGDIISEILSNGFRLTAMRMI 139


>AE014297-999|AAF54425.1|  387|Drosophila melanogaster CG8362-PA
           protein.
          Length = 387

 Score = 31.5 bits (68), Expect = 0.31
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +3

Query: 84  RERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFV 197
           +  T  ++KP  ++ GL+G II      GF+L  ++ +
Sbjct: 245 KNTTLAIIKPHSIKDGLLGDIISEILSNGFRLTAMRMI 282


>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
            protein.
          Length = 2284

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 223  CWRSSSDGHTNFKPTSLKPFFSKRSIMVPTRPRCTP 116
            C+  S D     +P +  P  + R+ + PTRPRC P
Sbjct: 1686 CYPGSPDPEC--QPATYLPPTTSRTTIPPTRPRCYP 1719


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,030,259
Number of Sequences: 53049
Number of extensions: 277049
Number of successful extensions: 488
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)