Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_K13
         (350 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...    80   5e-16
L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical pr...    27   2.9  
Z83127-3|CAB05629.2|  291|Caenorhabditis elegans Hypothetical pr...    26   6.6  
Z50857-5|CAJ43436.1|  719|Caenorhabditis elegans Hypothetical pr...    26   6.6  
Z50857-4|CAC42283.1|  694|Caenorhabditis elegans Hypothetical pr...    26   6.6  
Z50857-3|CAC42284.1|  753|Caenorhabditis elegans Hypothetical pr...    26   6.6  
AF136239-1|AAD34463.1|  694|Caenorhabditis elegans DAF-12 A2 pro...    26   6.6  
AF136238-1|AAD34462.1|  753|Caenorhabditis elegans DAF-12 A1 pro...    26   6.6  

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score = 79.8 bits (188), Expect = 5e-16
 Identities = 36/58 (62%), Positives = 44/58 (75%)
 Frame = +3

Query: 87  ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFP 260
           ERTFI +KPDGV RGLVG II RFE++G+KLV LK +  S+  L+ HY DL  +PFFP
Sbjct: 5   ERTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFP 62


>L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical
           protein K02D10.4 protein.
          Length = 227

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 134 CGHHY*TFRKERLQTSRFEIRMAIRRTSP 220
           CGH        R +T +FE R+ ++R+SP
Sbjct: 107 CGHPVEVDDHHRRETKKFENRLTLKRSSP 135


>Z83127-3|CAB05629.2|  291|Caenorhabditis elegans Hypothetical
           protein T23F6.3 protein.
          Length = 291

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 308 DPQVPELNVTFXXEPRGKERPGCQIAVV 225
           +PQ  + N+T    P G+E  G Q+A V
Sbjct: 77  NPQAQQQNLTGTIAPAGREGTGVQVAAV 104


>Z50857-5|CAJ43436.1|  719|Caenorhabditis elegans Hypothetical
           protein F11A1.3d protein.
          Length = 719

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 244 PGLSFPLGSYXKVTLSSGTCGSP 312
           PG++   GS  K+  SSG CGSP
Sbjct: 44  PGMNGYHGSGVKLEESSGACGSP 66


>Z50857-4|CAC42283.1|  694|Caenorhabditis elegans Hypothetical
           protein F11A1.3b protein.
          Length = 694

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 244 PGLSFPLGSYXKVTLSSGTCGSP 312
           PG++   GS  K+  SSG CGSP
Sbjct: 19  PGMNGYHGSGVKLEESSGACGSP 41


>Z50857-3|CAC42284.1|  753|Caenorhabditis elegans Hypothetical
           protein F11A1.3a protein.
          Length = 753

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 244 PGLSFPLGSYXKVTLSSGTCGSP 312
           PG++   GS  K+  SSG CGSP
Sbjct: 78  PGMNGYHGSGVKLEESSGACGSP 100


>AF136239-1|AAD34463.1|  694|Caenorhabditis elegans DAF-12 A2
           protein.
          Length = 694

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 244 PGLSFPLGSYXKVTLSSGTCGSP 312
           PG++   GS  K+  SSG CGSP
Sbjct: 19  PGMNGYHGSGVKLEESSGACGSP 41


>AF136238-1|AAD34462.1|  753|Caenorhabditis elegans DAF-12 A1
           protein.
          Length = 753

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 244 PGLSFPLGSYXKVTLSSGTCGSP 312
           PG++   GS  K+  SSG CGSP
Sbjct: 78  PGMNGYHGSGVKLEESSGACGSP 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,536,123
Number of Sequences: 27780
Number of extensions: 140998
Number of successful extensions: 291
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 291
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)