Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_K11
         (658 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0106 - 26516930-26517349,26517474-26517905,26517981-265180...    85   5e-17
03_06_0759 - 36059872-36059928,36059934-36060125,36060241-360603...    34   0.11 
01_05_0650 + 23925913-23926025,23926128-23926388,23927431-239274...    28   5.7  
01_06_0535 + 30061862-30063388                                         28   7.5  
01_05_0667 + 24142121-24142319,24142742-24142864,24144522-24144739     28   7.5  
03_01_0605 - 4453409-4453692,4454541-4454594,4454706-4454812,445...    27   9.9  

>01_06_0106 -
           26516930-26517349,26517474-26517905,26517981-26518058,
           26518352-26518499,26518662-26518765,26518838-26518912,
           26519195-26519261,26519352-26519356
          Length = 442

 Score = 85.0 bits (201), Expect = 5e-17
 Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
 Frame = +3

Query: 258 LRKWFTCGYILVIWIFLPFAIWTLLSFIFEHFYDTIQLNN-VPEVKAMLPGINIPTSDFW 434
           +R WF+ G    +   +  ++  L   I   ++     +  +  + A   GI+I   D  
Sbjct: 4   MRAWFSAGVYFSVVALVGISVMLLWDSIGAVYFSGRSFSTWLQNLLASSFGISI--MDIA 61

Query: 435 IYFLAIALSTIFHELGHALAAAQEDVQIIAVGVYVFTIIPVAFVDLNTDQLKNLAVTKRL 614
               +   S  FHE GHA+AAA E +QI  V V+V  + P A + LN DQL+NL +   L
Sbjct: 62  AIIASTVFSIAFHEFGHAVAAASEGIQIEYVAVFVAALFPGALIALNCDQLQNLPLFSML 121

Query: 615 RIYCAGVWHNIAI 653
           RIYCAG+WHN+ +
Sbjct: 122 RIYCAGIWHNVML 134


>03_06_0759 -
           36059872-36059928,36059934-36060125,36060241-36060348,
           36060440-36060712,36060923-36061009,36061085-36061276,
           36061841-36061969,36062087-36062200,36062446-36062490,
           36062785-36062956,36063229-36063515,36063989-36064456
          Length = 707

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +3

Query: 423 SDFWIYFL-AIALSTIFHELGHALAAAQEDVQIIAVGVYVFTIIPVAFVDLNTDQLK 590
           S F +Y L A+++ TIF+  GH+L++    V  I V V    ++ V+ V  + D++K
Sbjct: 442 SRFALYMLLALSVGTIFNNAGHSLSSVMVRVSAIFVYVSFVILLSVSGVPAHIDEIK 498


>01_05_0650 +
           23925913-23926025,23926128-23926388,23927431-23927449,
           23927526-23927745,23927871-23928052,23928158-23928447,
           23928621-23928750,23928888-23929235
          Length = 520

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +3

Query: 414 IPTSDFWIYFLAIALSTIFHELGHALAAAQEDVQIIAVGVYVFTIIPVAF 563
           +P +  W+  L I+L      LG +L A Q  V I  +G+YV   +P+ F
Sbjct: 387 VPINAVWLSAL-ISLCMALPSLG-SLVAFQAMVSIATIGLYVAYALPILF 434


>01_06_0535 + 30061862-30063388
          Length = 508

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 15/70 (21%), Positives = 32/70 (45%)
 Frame = +3

Query: 414 IPTSDFWIYFLAIALSTIFHELGHALAAAQEDVQIIAVGVYVFTIIPVAFVDLNTDQLKN 593
           +P  DFW +F  +A  +   E    LA+   ++  +  G ++   I  + ++ N      
Sbjct: 321 LPKEDFWYFFKTVAFGSTNPEEEPKLASICMEIAAVLNGSFMGLNIVASILNSNLSAQFW 380

Query: 594 LAVTKRLRIY 623
            ++ KRL+ +
Sbjct: 381 YSLLKRLKFF 390


>01_05_0667 + 24142121-24142319,24142742-24142864,24144522-24144739
          Length = 179

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +3

Query: 276 CGYILVIWIFLPFAIWTLLSFIFEHFYDTIQLNNVPEV 389
           C YI+ + +  P+    + S +  H  D  +  N+PE+
Sbjct: 90  CVYIMTLGVLAPYRSLGIGSKLLNHVIDLCEKQNIPEI 127


>03_01_0605 -
           4453409-4453692,4454541-4454594,4454706-4454812,
           4454865-4454928,4456996-4457896
          Length = 469

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -1

Query: 475 SWNIVLNAIARK*IQKSDVGIFIPGSIALTSGTLLSCIVS 356
           S+  +L+A++R    +  + +F   ++A     LLSC+VS
Sbjct: 95  SYTAILSALSRHGRPREALSLFSAAAVARPDAELLSCVVS 134


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,090,979
Number of Sequences: 37544
Number of extensions: 286002
Number of successful extensions: 593
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)