Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_K11
(658 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132860-1|CAB60513.2| 616|Caenorhabditis elegans Hypothetical ... 81 5e-16
AF026213-4|AAB71305.2| 458|Caenorhabditis elegans Cell death ab... 31 0.95
AF016428-1|AAO26001.1| 330|Caenorhabditis elegans Serpentine re... 30 1.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 2.2
U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of ... 29 2.9
U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of ... 29 2.9
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ... 29 2.9
Z82059-2|CAB04876.3| 557|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z68120-1|CAA92199.3| 711|Caenorhabditis elegans Hypothetical pr... 29 3.8
U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical p... 29 3.8
AJ131742-1|CAA10498.1| 590|Caenorhabditis elegans protein ( Cae... 29 3.8
AF218866-1|AAF67103.1| 711|Caenorhabditis elegans transmembrane... 29 3.8
AF098989-4|AAK18956.2| 590|Caenorhabditis elegans Dystrobrevin ... 29 3.8
AF016428-2|AAO26002.1| 316|Caenorhabditis elegans Serpentine re... 29 3.8
AC024882-12|AAF60928.2| 347|Caenorhabditis elegans Seven tm rec... 29 3.8
U64846-11|AAG24118.2| 231|Caenorhabditis elegans Serpentine rec... 28 5.1
U64846-10|AAW88397.1| 341|Caenorhabditis elegans Serpentine rec... 28 5.1
AF016671-6|AAK73904.1| 979|Caenorhabditis elegans Adaptin or ad... 28 5.1
AF016671-5|AAB66112.2| 1251|Caenorhabditis elegans Adaptin or ad... 28 5.1
U53151-2|AAN73859.1| 385|Caenorhabditis elegans Serpentine rece... 28 6.7
Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z50739-2|CAA90602.2| 381|Caenorhabditis elegans Hypothetical pr... 27 8.9
U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical pr... 27 8.9
U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical pr... 27 8.9
U21317-5|AAA62526.2| 895|Caenorhabditis elegans Hypothetical pr... 27 8.9
AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeri... 27 8.9
>AL132860-1|CAB60513.2| 616|Caenorhabditis elegans Hypothetical
protein Y56A3A.2 protein.
Length = 616
Score = 81.4 bits (192), Expect = 5e-16
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Frame = +3
Query: 354 YDTIQLNNVPEVKAM---LPGINIPTSDFWIYFLAIALSTIFHELGHALAAAQEDVQIIA 524
YD I+ E + + +PG N+P I+ L + ++ +FHELGHA AA V +
Sbjct: 183 YDMIEDGQKSEDRGLVPIIPGFNLPWGHIPIFMLVLIVAAVFHELGHAWAATSNGVTVNG 242
Query: 525 VGVYVFTIIPVAFVDLNTDQLKNLAVTKRLRIYCAGVWHNIAIA 656
G+++ + P AF D+ LK +RL+I+ AG+WHN+ +A
Sbjct: 243 FGIFILAVYPGAFTDIEAVTLKRATTFRRLQIFGAGIWHNLLLA 286
>AF026213-4|AAB71305.2| 458|Caenorhabditis elegans Cell death
abnormality protein 8 protein.
Length = 458
Score = 30.7 bits (66), Expect = 0.95
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 105 FFDSFFKSCMHYPYYAFLEGTGLKFGILNFSWTTTAFNRCL 227
+F +++++ YPY+ + + L I++ SW+ NR L
Sbjct: 206 YFQNYYQTGT-YPYWLYFQAASLLLSIISISWSVVVQNRSL 245
>AF016428-1|AAO26001.1| 330|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 66 protein.
Length = 330
Score = 29.9 bits (64), Expect = 1.7
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Frame = +3
Query: 234 WSKNLSRILRK-WFTCGYILVIWIFLPFAIWTLLSFIFEHFYDTIQLNNVPE-VKAMLPG 407
W ++ + K + CG ++ FLP IW + DT+ PE VK
Sbjct: 129 WPQSCEKFWSKSYIFCGLAFALYSFLPTTIWFGFTNEVHILNDTLMRTRNPELVKTATNT 188
Query: 408 INIPTSDFWIYF--LAIALSTIFHELGHALAAAQEDV 512
I T ++I L I S I ++ AL+A E +
Sbjct: 189 TAIFTIIYFIIICVLGIKTSVIINKNKQALSAMYEKI 225
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 332 EQSPYSERQEYPDYKNVTAREPFSEYSRQILTPSIKASVKSSCRP 198
E PY + EY DY T R P+ S ++L + +S+ RP
Sbjct: 208 EPQPYPAKFEYVDYPAPTTRRPYPYPSFEVLPHHEEYEPRSTRRP 252
>U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform c protein.
Length = 1375
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 429 FWIYFLAIALSTIFHELGHALAAAQEDVQIIAVGVYVFTIIPVAFVDLNT 578
FW+ FL TIF +G+ A + IA VY F IP+ V L +
Sbjct: 162 FWMSFLYAG--TIFTTIGYGNIACKTRAGQIATMVYAFVGIPIMLVMLTS 209
>U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform a protein.
Length = 1544
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 429 FWIYFLAIALSTIFHELGHALAAAQEDVQIIAVGVYVFTIIPVAFVDLNT 578
FW+ FL TIF +G+ A + IA VY F IP+ V L +
Sbjct: 162 FWMSFLYAG--TIFTTIGYGNIACKTRAGQIATMVYAFVGIPIMLVMLTS 209
>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform b protein.
Length = 1720
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 429 FWIYFLAIALSTIFHELGHALAAAQEDVQIIAVGVYVFTIIPVAFVDLNT 578
FW+ FL TIF +G+ A + IA VY F IP+ V L +
Sbjct: 162 FWMSFLYAG--TIFTTIGYGNIACKTRAGQIATMVYAFVGIPIMLVMLTS 209
>Z82059-2|CAB04876.3| 557|Caenorhabditis elegans Hypothetical
protein T27E9.5 protein.
Length = 557
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 255 ILRKWFTCGYILVIWIFLPFAIWTLLSFIFEHFYDTIQLN 374
+LR W C ++ +IW F LL E ++D++ L+
Sbjct: 283 LLRHWVLCWFLSIIWEFTELMFIDLLPNFAECWWDSLILD 322
>Z68120-1|CAA92199.3| 711|Caenorhabditis elegans Hypothetical
protein T24C2.1 protein.
Length = 711
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 264 KWFTCGYILVIWIFLPFAIWTLLSFIFEHFYDT 362
KW ++L+IW F +W +L +F + Y +
Sbjct: 629 KWSGVEHLLLIWSFASLIVWMMLIALFLYRYSS 661
>U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical
protein F41G3.3 protein.
Length = 577
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 345 EHFYDTIQLNNVPEVKAMLPGINI 416
+ FYDT+ NVP VK M P N+
Sbjct: 114 QDFYDTVPATNVPPVKPMGPPKNL 137
>AJ131742-1|CAA10498.1| 590|Caenorhabditis elegans protein (
Caenorhabditis elegansmRNA for dystrobrevin. ).
Length = 590
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 450 IALSTIFHELGHALAAAQEDVQIIAVGVYVFTIIPVAFVDLNTDQLKNLAVTKRLRIYCA 629
+ L+T+FH L L A+Q +++ + + ++ A+ NT +L ++ L CA
Sbjct: 104 LLLTTVFHNLNKRLVASQHVDTDVSISLLLAFLLG-AYDKQNTGRLTVFSIKVALATLCA 162
Query: 630 G 632
G
Sbjct: 163 G 163
>AF218866-1|AAF67103.1| 711|Caenorhabditis elegans transmembrane
protein RAM-5 protein.
Length = 711
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 264 KWFTCGYILVIWIFLPFAIWTLLSFIFEHFYDT 362
KW ++L+IW F +W +L +F + Y +
Sbjct: 629 KWSGVEHLLLIWSFASLIVWMMLIALFLYRYSS 661
>AF098989-4|AAK18956.2| 590|Caenorhabditis elegans Dystrobrevin
homolog protein 1 protein.
Length = 590
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 450 IALSTIFHELGHALAAAQEDVQIIAVGVYVFTIIPVAFVDLNTDQLKNLAVTKRLRIYCA 629
+ L+T+FH L L A+Q +++ + + ++ A+ NT +L ++ L CA
Sbjct: 104 LLLTTVFHNLNKRLVASQHVDTDVSISLLLAFLLG-AYDKQNTGRLTVFSIKVALATLCA 162
Query: 630 G 632
G
Sbjct: 163 G 163
>AF016428-2|AAO26002.1| 316|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 65 protein.
Length = 316
Score = 28.7 bits (61), Expect = 3.8
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Frame = +3
Query: 234 WSKNLSRILRKWFT-CGYILVIWIFLPFAIWTLLSFIFEHFYDTIQLNNVPEVKAMLPGI 410
W + K++ CG ++ FLP W + E +T+ PEV A +
Sbjct: 129 WPYKYDKFWSKYYLHCGLAFALYSFLPTFFWLDFAIKVEIQNETLVTIVYPEVLAKANNV 188
Query: 411 N-IPTSDFWIYFLAIAL--STIFHELGHALAAAQEDV 512
I T ++I F+A+ + S F + L+ E V
Sbjct: 189 TAIFTVLYFIIFIALGVMASAYFSKQQQILSTMHETV 225
>AC024882-12|AAF60928.2| 347|Caenorhabditis elegans Seven tm
receptor protein 163 protein.
Length = 347
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +3
Query: 264 KWFTCGYILVIWIFLPF---AIWTLLSFIF 344
K+F GY LV+W+F+P +WT+++ F
Sbjct: 128 KYFQGGY-LVVWLFVPLFVGTVWTIVTVYF 156
>U64846-11|AAG24118.2| 231|Caenorhabditis elegans Serpentine
receptor, class h protein194, isoform a protein.
Length = 231
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/83 (22%), Positives = 37/83 (44%)
Frame = +3
Query: 222 CLYRWSKNLSRILRKWFTCGYILVIWIFLPFAIWTLLSFIFEHFYDTIQLNNVPEVKAML 401
C + + + + R W Y++V+++ LP I +H ++ QL +P
Sbjct: 17 CTFSFKHHWVYLRRLWLAAHYVIVVFLMLPMVFLVPEENIAQHIFE--QLPCLPSYIYNA 74
Query: 402 PGINIPTSDFWIYFLAIALSTIF 470
P + + T D +F+ +S IF
Sbjct: 75 P-VFVFTEDITYHFI---ISVIF 93
>U64846-10|AAW88397.1| 341|Caenorhabditis elegans Serpentine
receptor, class h protein194, isoform b protein.
Length = 341
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/83 (22%), Positives = 37/83 (44%)
Frame = +3
Query: 222 CLYRWSKNLSRILRKWFTCGYILVIWIFLPFAIWTLLSFIFEHFYDTIQLNNVPEVKAML 401
C + + + + R W Y++V+++ LP I +H ++ QL +P
Sbjct: 127 CTFSFKHHWVYLRRLWLAAHYVIVVFLMLPMVFLVPEENIAQHIFE--QLPCLPSYIYNA 184
Query: 402 PGINIPTSDFWIYFLAIALSTIF 470
P + + T D +F+ +S IF
Sbjct: 185 P-VFVFTEDITYHFI---ISVIF 203
>AF016671-6|AAK73904.1| 979|Caenorhabditis elegans Adaptin or
adaptin-related proteinprotein 5, isoform b protein.
Length = 979
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = -3
Query: 644 IMPHSSTVNPQSFGDSKIL*LISIQVYKCNWYNSKYINSYCYYLNILLSSCK 489
+M H + D + +I I C+W N +YI ++ +Y+++L+ K
Sbjct: 107 LMEHVEAAEGSHYRDELLSRIIGI----CSWSNYQYITNFEWYISVLVELTK 154
>AF016671-5|AAB66112.2| 1251|Caenorhabditis elegans Adaptin or
adaptin-related proteinprotein 5, isoform a protein.
Length = 1251
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = -3
Query: 644 IMPHSSTVNPQSFGDSKIL*LISIQVYKCNWYNSKYINSYCYYLNILLSSCK 489
+M H + D + +I I C+W N +YI ++ +Y+++L+ K
Sbjct: 379 LMEHVEAAEGSHYRDELLSRIIGI----CSWSNYQYITNFEWYISVLVELTK 426
>U53151-2|AAN73859.1| 385|Caenorhabditis elegans Serpentine
receptor, class r protein10 protein.
Length = 385
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 303 FLPF-AIWTLLSFIFEHFYDTIQLNNVPEVKAMLPGINIPTSDFWIYFLAIALSTIFHEL 479
F PF +W+L++ I Y T N+ P + +++ G N+ F+I+F+ I T+ L
Sbjct: 250 FAPFFLLWSLINGI----YITSFFNSNPLLYSIILGFNLAAIIFYIFFVLIPPCTLQEHL 305
>Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical
protein F48C11.1 protein.
Length = 364
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +2
Query: 236 E*EFVSNTQKMVHVRLHSCNLDILAFRY--MDFALI 337
E +V + Q +VH R+ + ++ LAF Y MDF ++
Sbjct: 175 EDNYVPSIQDIVHCRISTTGINELAFNYKKMDFKMV 210
>Z50739-2|CAA90602.2| 381|Caenorhabditis elegans Hypothetical
protein F13D2.3 protein.
Length = 381
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 276 CGYILV-IWIFLPFAIWTLLSFIFEHFYDTIQLN 374
C I+ I ++LP+ I +L F+ E FY+TI N
Sbjct: 318 CAIIVTHIILWLPYNIISLSRFVNEGFYETISQN 351
>U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical
protein R57.1c protein.
Length = 751
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 312 FAIWTLLSFIFEHFYDTIQLNNVPEVKAMLPGINIPTSDF 431
FA +L HF + +P++K + GIN+ SDF
Sbjct: 578 FADDVILPMNTTHFASVMLKTYLPQLKTTISGINVSRSDF 617
>U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical
protein R57.1a protein.
Length = 770
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 312 FAIWTLLSFIFEHFYDTIQLNNVPEVKAMLPGINIPTSDF 431
FA +L HF + +P++K + GIN+ SDF
Sbjct: 597 FADDVILPMNTTHFASVMLKTYLPQLKTTISGINVSRSDF 636
>U21317-5|AAA62526.2| 895|Caenorhabditis elegans Hypothetical
protein B0495.7 protein.
Length = 895
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 12 VHQRYKLNK*IRNMSFVLLSSIVLAFYTVIWFFDSFFKSCMHY 140
VH Y N IRN+ V +I+L+F ++++ + S Y
Sbjct: 472 VHSHYADNNRIRNVEMVQYDTILLSFASILFLMTFYNLSSAFY 514
>AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +2
Query: 236 E*EFVSNTQKMVHVRLHSCNLDILAFRY--MDFALI 337
E +V + Q +VH R+ + ++ LAF Y MDF ++
Sbjct: 175 EDNYVPSIQDIVHCRISTTGINELAFNYKKMDFKMV 210
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,137,052
Number of Sequences: 27780
Number of extensions: 296661
Number of successful extensions: 844
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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